RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 LARP1Q6PKG0 1096 aaKnown RBP11.35□□□□□ -0.59
CTNNA1-227ENST00000521387 KLHL34Q8N239 644 aa11.35□□□□□ -0.59
CTNNA1-227ENST00000521387 PLSCR2Q9NRY7 297 aa11.35□□□□□ -0.59
CTNNA1-227ENST00000521387 KIAA0232Q92628 1395 aa11.35□□□□□ -0.59
CTNNA1-227ENST00000521387 SBF2Q86WG5 1849 aa11.35□□□□□ -0.59
CTNNA1-227ENST00000521387 TCP11L2Q8N4U5 519 aa11.34□□□□□ -0.59
CTNNA1-227ENST00000521387 CRYBG1Q9Y4K1 1723 aa11.34□□□□□ -0.59
CTNNA1-227ENST00000521387 TRPM3Q9HCF6 1732 aaPredicted RBP11.33□□□□□ -0.6
CTNNA1-227ENST00000521387 PMFBP1Q8TBY8 1022 aa11.33□□□□□ -0.6
CTNNA1-227ENST00000521387 STK26Q9P289 416 aa11.33□□□□□ -0.6
CTNNA1-227ENST00000521387 SSH2Q76I76 1423 aa11.33□□□□□ -0.6
CTNNA1-227ENST00000521387 ALS2Q96Q42 1657 aa11.33□□□□□ -0.6
CTNNA1-227ENST00000521387 VGFO15240 615 aaPredicted RBP11.32□□□□□ -0.6
CTNNA1-227ENST00000521387 SSUH2Q9Y2M2 353 aa11.32□□□□□ -0.6
CTNNA1-227ENST00000521387 OVOS2A0A0G2JMS6 1433 aa11.32□□□□□ -0.6
CTNNA1-227ENST00000521387 OVOS2A0A0J9YW53 1432 aa11.32□□□□□ -0.6
CTNNA1-227ENST00000521387 OVOS2Q6IE36 1432 aa11.32□□□□□ -0.6
CTNNA1-227ENST00000521387 C11orf95C9JLR9 678 aaPredicted RBP11.31□□□□□ -0.6
CTNNA1-227ENST00000521387 LOC105371045A0A1W2PR82 267 aa11.3□□□□□ -0.6
CTNNA1-227ENST00000521387 ZNF827Q17R98 1081 aa11.3□□□□□ -0.6
CTNNA1-227ENST00000521387 ATP7BP35670 1465 aa11.3□□□□□ -0.6
CTNNA1-227ENST00000521387 NUP155O75694 1391 aa11.29□□□□□ -0.6
CTNNA1-227ENST00000521387 ABCC11Q96J66 1382 aa11.29□□□□□ -0.6
CTNNA1-227ENST00000521387 TNS2Q63HR2 1409 aa11.29□□□□□ -0.6
CTNNA1-227ENST00000521387 CLTCL1P53675 1640 aa11.29□□□□□ -0.6
CTNNA1-227ENST00000521387 TOMM70O94826 608 aa11.29□□□□□ -0.6
CTNNA1-227ENST00000521387 ATXN8OSP0DMR3 200 aa11.29□□□□□ -0.6
CTNNA1-227ENST00000521387 ZC3H6P61129 1189 aaKnown RBP11.29□□□□□ -0.6
CTNNA1-227ENST00000521387 COL24A1Q17RW2 1714 aa11.29□□□□□ -0.6
CTNNA1-227ENST00000521387 WDR90Q96KV7 1748 aa11.29□□□□□ -0.6
CTNNA1-227ENST00000521387 PARP4Q9UKK3 1724 aaKnown RBP11.29□□□□□ -0.6
CTNNA1-227ENST00000521387 DHX57Q6P158 1386 aaKnown RBP11.28□□□□□ -0.6
CTNNA1-227ENST00000521387 AATKQ6ZMQ8 1374 aa11.28□□□□□ -0.6
CTNNA1-227ENST00000521387 PHRF1Q9P1Y6 1649 aaKnown RBP11.28□□□□□ -0.6
CTNNA1-227ENST00000521387 EVA1CP58658 441 aa11.28□□□□□ -0.6
CTNNA1-227ENST00000521387 MARCH10Q8NA82 808 aaPredicted RBP11.28□□□□□ -0.6
CTNNA1-227ENST00000521387 THRAP3Q9Y2W1 955 aaKnown RBP11.28□□□□□ -0.6
CTNNA1-227ENST00000521387 PAPPAQ13219 1627 aa11.27□□□□□ -0.61
CTNNA1-227ENST00000521387 HSPA1AP0DMV8 641 aaKnown RBP11.26□□□□□ -0.61
CTNNA1-227ENST00000521387 HSPA1BP0DMV9 641 aaKnown RBP11.26□□□□□ -0.61
CTNNA1-227ENST00000521387 FAM161AQ3B820 660 aa11.26□□□□□ -0.61
CTNNA1-227ENST00000521387 TMEM132EQ6IEE7 984 aa11.26□□□□□ -0.61
CTNNA1-227ENST00000521387 ACIN1Q9UKV3 1341 aaKnown RBP11.26□□□□□ -0.61
CTNNA1-227ENST00000521387 BCL9O00512 1426 aa11.26□□□□□ -0.61
CTNNA1-227ENST00000521387 PRR29P0C7W0 189 aa11.24□□□□□ -0.61
CTNNA1-227ENST00000521387 POLD1P28340 1107 aa11.24□□□□□ -0.61
CTNNA1-227ENST00000521387 SLC16A10Q8TF71 515 aa11.24□□□□□ -0.61
CTNNA1-227ENST00000521387 IFT172Q9UG01 1749 aa11.23□□□□□ -0.61
CTNNA1-227ENST00000521387 LRRC4BQ9NT99 713 aa11.23□□□□□ -0.61
CTNNA1-227ENST00000521387 ADGRF5Q8IZF2 1346 aa11.23□□□□□ -0.61
CTNNA1-227ENST00000521387 VPS8Q8N3P4 1428 aa11.23□□□□□ -0.61
CTNNA1-227ENST00000521387 LRRC37A3O60309 1634 aa11.22□□□□□ -0.61
CTNNA1-227ENST00000521387 DDB1Q16531 1140 aa11.22□□□□□ -0.61
CTNNA1-227ENST00000521387 RPGRIP1LQ68CZ1 1315 aa11.22□□□□□ -0.61
CTNNA1-227ENST00000521387 PNPLA7Q6ZV29 1317 aa11.22□□□□□ -0.61
CTNNA1-227ENST00000521387 SIRT1Q96EB6 747 aa11.22□□□□□ -0.61
CTNNA1-227ENST00000521387 LMO7Q8WWI1 1683 aa11.21□□□□□ -0.61
CTNNA1-227ENST00000521387 GPRASP1Q5JY77 1395 aa11.21□□□□□ -0.61
CTNNA1-227ENST00000521387 PRR36Q9H6K5 1346 aa11.21□□□□□ -0.61
CTNNA1-227ENST00000521387 CD44P16070 742 aaKnown RBP11.21□□□□□ -0.61
CTNNA1-227ENST00000521387 NMRK2Q9NPI5 230 aa11.21□□□□□ -0.61
CTNNA1-227ENST00000521387 KNDC1Q76NI1 1749 aa11.2□□□□□ -0.62
CTNNA1-227ENST00000521387 ANKARQ7Z5J8 1434 aa11.19□□□□□ -0.62
CTNNA1-227ENST00000521387 ARHGEF28Q8N1W1 1705 aaKnown RBP11.19□□□□□ -0.62
CTNNA1-227ENST00000521387 PAK3O75914 559 aaPredicted RBP11.19□□□□□ -0.62
CTNNA1-227ENST00000521387 NUTM2GQ5VZR2 741 aa11.19□□□□□ -0.62
CTNNA1-227ENST00000521387 RBM46Q8TBY0 533 aaKnown RBP11.19□□□□□ -0.62
CTNNA1-227ENST00000521387 YTHDC2Q9H6S0 1430 aaKnown RBP11.18□□□□□ -0.62
CTNNA1-227ENST00000521387 TOPAZ1Q8N9V7 1692 aa11.18□□□□□ -0.62
CTNNA1-227ENST00000521387 KIF1BO60333 1816 aa11.18□□□□□ -0.62
CTNNA1-227ENST00000521387 PPLO60437 1756 aa11.18□□□□□ -0.62
CTNNA1-227ENST00000521387 COL5A2P05997 1499 aaPredicted RBP11.18□□□□□ -0.62
CTNNA1-227ENST00000521387 SAFB2Q14151 953 aaKnown RBP eCLIP11.17□□□□□ -0.62
CTNNA1-227ENST00000521387 CRB1P82279 1406 aa11.17□□□□□ -0.62
CTNNA1-227ENST00000521387 CPDO75976 1380 aa11.16□□□□□ -0.62
CTNNA1-227ENST00000521387 TULP4Q9NRJ4 1543 aa11.16□□□□□ -0.62
CTNNA1-227ENST00000521387 FAM50AQ14320 339 aaKnown RBP11.15□□□□□ -0.62
CTNNA1-227ENST00000521387 FSTL1Q12841 308 aa11.14□□□□□ -0.63
CTNNA1-227ENST00000521387 PRAM1Q96QH2 718 aa11.14□□□□□ -0.63
CTNNA1-227ENST00000521387 FARP1Q9Y4F1 1045 aaPredicted RBP11.14□□□□□ -0.63
CTNNA1-227ENST00000521387 CD2APQ9Y5K6 639 aa11.14□□□□□ -0.63
CTNNA1-227ENST00000521387 QSER1Q2KHR3 1735 aa11.13□□□□□ -0.63
CTNNA1-227ENST00000521387 NGDNQ8NEJ9 315 aaKnown RBP11.13□□□□□ -0.63
CTNNA1-227ENST00000521387 ACSBG1Q96GR2 724 aa11.12□□□□□ -0.63
CTNNA1-227ENST00000521387 ROCK1Q13464 1354 aa11.12□□□□□ -0.63
CTNNA1-227ENST00000521387 RGS19P49795 217 aa11.11□□□□□ -0.63
CTNNA1-227ENST00000521387 KCNQ4P56696 695 aa11.11□□□□□ -0.63
CTNNA1-227ENST00000521387 TUBGCP6Q96RT7 1819 aa11.11□□□□□ -0.63
CTNNA1-227ENST00000521387 USP19O94966 1318 aa11.1□□□□□ -0.63
CTNNA1-227ENST00000521387 MLLT1Q03111 559 aaPredicted RBP11.1□□□□□ -0.63
CTNNA1-227ENST00000521387 MSL1Q68DK7 614 aa11.1□□□□□ -0.63
CTNNA1-227ENST00000521387 COL23A1Q86Y22 540 aaPredicted RBP11.1□□□□□ -0.63
CTNNA1-227ENST00000521387 HIRIP3Q9BW71 556 aaPredicted RBP11.1□□□□□ -0.63
CTNNA1-227ENST00000521387 AKAP12Q02952 1782 aa11.09□□□□□ -0.63
CTNNA1-227ENST00000521387 NHSQ6T4R5 1651 aa11.09□□□□□ -0.63
CTNNA1-227ENST00000521387 ANKRD30BQ9BXX2 1392 aa11.09□□□□□ -0.63
CTNNA1-227ENST00000521387 FOXN1O15353 648 aa11.09□□□□□ -0.63
CTNNA1-227ENST00000521387 DCBLD2Q96PD2 775 aa11.09□□□□□ -0.63
CTNNA1-227ENST00000521387 TFCP2L1Q9NZI6 479 aa11.09□□□□□ -0.63
CTNNA1-227ENST00000521387 PIK3C2GO75747 1445 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms