RNA–Protein interactions for RNA: ENST00000521122.1

PVT1-210, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 221 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-210ENST00000521122 ZC3H6P61129 1189 aaKnown RBP13.7□□□□□ -0.22
PVT1-210ENST00000521122 MARCH10Q8NA82 808 aaPredicted RBP13.7□□□□□ -0.22
PVT1-210ENST00000521122 ABHD8Q96I13 439 aa13.7□□□□□ -0.22
PVT1-210ENST00000521122 STK26Q9P289 416 aa13.7□□□□□ -0.22
PVT1-210ENST00000521122 ABCC11Q96J66 1382 aa13.7□□□□□ -0.22
PVT1-210ENST00000521122 KNDC1Q76NI1 1749 aa13.69□□□□□ -0.22
PVT1-210ENST00000521122 PNPLA7Q6ZV29 1317 aa13.68□□□□□ -0.22
PVT1-210ENST00000521122 ACIN1Q9UKV3 1341 aaKnown RBP13.68□□□□□ -0.22
PVT1-210ENST00000521122 AKT1S1Q96B36 256 aa13.68□□□□□ -0.22
PVT1-210ENST00000521122 CD2APQ9Y5K6 639 aa13.68□□□□□ -0.22
PVT1-210ENST00000521122 LMO7Q8WWI1 1683 aa13.67□□□□□ -0.22
PVT1-210ENST00000521122 KANK4Q5T7N3 995 aaPredicted RBP13.67□□□□□ -0.22
PVT1-210ENST00000521122 AKAP12Q02952 1782 aa13.67□□□□□ -0.22
PVT1-210ENST00000521122 KIF1BO60333 1816 aa13.67□□□□□ -0.22
PVT1-210ENST00000521122 ANKARQ7Z5J8 1434 aa13.66□□□□□ -0.22
PVT1-210ENST00000521122 CRB1P82279 1406 aa13.65□□□□□ -0.22
PVT1-210ENST00000521122 CICQ96RK0 1608 aaPredicted RBP13.65□□□□□ -0.22
PVT1-210ENST00000521122 FOXN1O15353 648 aa13.65□□□□□ -0.22
PVT1-210ENST00000521122 BRD4O60885 1362 aaPredicted RBP13.65□□□□□ -0.22
PVT1-210ENST00000521122 NUP155O75694 1391 aa13.64□□□□□ -0.23
PVT1-210ENST00000521122 PAK3O75914 559 aaPredicted RBP13.64□□□□□ -0.23
PVT1-210ENST00000521122 LRRC4BQ9NT99 713 aa13.64□□□□□ -0.23
PVT1-210ENST00000521122 RPGRIP1LQ68CZ1 1315 aa13.64□□□□□ -0.23
PVT1-210ENST00000521122 COL5A2P05997 1499 aaPredicted RBP13.63□□□□□ -0.23
PVT1-210ENST00000521122 ANKRD30BQ9BXX2 1392 aa13.63□□□□□ -0.23
PVT1-210ENST00000521122 TUBGCP6Q96RT7 1819 aa13.62□□□□□ -0.23
PVT1-210ENST00000521122 CPDO75976 1380 aa13.61□□□□□ -0.23
PVT1-210ENST00000521122 NHSQ6T4R5 1651 aa13.61□□□□□ -0.23
PVT1-210ENST00000521122 SMC1BQ8NDV3 1235 aa13.61□□□□□ -0.23
PVT1-210ENST00000521122 SIRT1Q96EB6 747 aa13.61□□□□□ -0.23
PVT1-210ENST00000521122 C10orf71Q711Q0 1435 aa13.61□□□□□ -0.23
PVT1-210ENST00000521122 TFCP2L1Q9NZI6 479 aa13.6□□□□□ -0.23
PVT1-210ENST00000521122 PPLO60437 1756 aa13.6□□□□□ -0.23
PVT1-210ENST00000521122 IGSF1Q8N6C5 1336 aa13.6□□□□□ -0.23
PVT1-210ENST00000521122 CTCFP49711 727 aaPredicted RBP13.59□□□□□ -0.23
PVT1-210ENST00000521122 WNK3Q9BYP7 1800 aa13.58□□□□□ -0.24
PVT1-210ENST00000521122 CCDC85CA6NKD9 419 aa13.58□□□□□ -0.24
PVT1-210ENST00000521122 CDCA7Q9BWT1 371 aaPredicted RBP13.58□□□□□ -0.24
PVT1-210ENST00000521122 YTHDC2Q9H6S0 1430 aaKnown RBP13.56□□□□□ -0.24
PVT1-210ENST00000521122 SLC27A3Q5K4L6 730 aa13.56□□□□□ -0.24
PVT1-210ENST00000521122 TMEM132EQ6IEE7 984 aa13.56□□□□□ -0.24
PVT1-210ENST00000521122 HIRIP3Q9BW71 556 aaPredicted RBP13.56□□□□□ -0.24
PVT1-210ENST00000521122 VPS8Q8N3P4 1428 aa13.56□□□□□ -0.24
PVT1-210ENST00000521122 PXDNLA1KZ92 1463 aa13.55□□□□□ -0.24
PVT1-210ENST00000521122 BTAF1O14981 1849 aa13.55□□□□□ -0.24
PVT1-210ENST00000521122 MSL1Q68DK7 614 aa13.54□□□□□ -0.24
PVT1-210ENST00000521122 NGDNQ8NEJ9 315 aaKnown RBP13.54□□□□□ -0.24
PVT1-210ENST00000521122 NUTM2GQ5VZR2 741 aa13.53□□□□□ -0.24
PVT1-210ENST00000521122 AIDAQ96BJ3 306 aa13.53□□□□□ -0.24
PVT1-210ENST00000521122 ACSBG1Q96GR2 724 aa13.53□□□□□ -0.24
PVT1-210ENST00000521122 PLEKHG2Q9H7P9 1386 aa13.53□□□□□ -0.24
PVT1-210ENST00000521122 USP6P35125 1406 aa13.53□□□□□ -0.24
PVT1-210ENST00000521122 LBX1P52954 281 aa13.52□□□□□ -0.25
PVT1-210ENST00000521122 TOM1L2Q6ZVM7 507 aa13.52□□□□□ -0.25
PVT1-210ENST00000521122 ADGRF5Q8IZF2 1346 aa13.52□□□□□ -0.25
PVT1-210ENST00000521122 KDM2BQ8NHM5 1336 aa13.52□□□□□ -0.25
PVT1-210ENST00000521122 TRPM1Q7Z4N2 1603 aa13.52□□□□□ -0.25
PVT1-210ENST00000521122 KCPQ6ZWJ8 1503 aa13.51□□□□□ -0.25
PVT1-210ENST00000521122 PRR36Q9H6K5 1346 aa13.51□□□□□ -0.25
PVT1-210ENST00000521122 EXOC5O00471 708 aa13.51□□□□□ -0.25
PVT1-210ENST00000521122 MSH5O43196 834 aa13.51□□□□□ -0.25
PVT1-210ENST00000521122 RRAGCQ9HB90 399 aa13.51□□□□□ -0.25
PVT1-210ENST00000521122 TNRC6CQ9HCJ0 1690 aaKnown RBP13.5□□□□□ -0.25
PVT1-210ENST00000521122 COL23A1Q86Y22 540 aaPredicted RBP13.5□□□□□ -0.25
PVT1-210ENST00000521122 SAFB2Q14151 953 aaKnown RBP eCLIP13.49□□□□□ -0.25
PVT1-210ENST00000521122 EIF3AQ14152 1382 aaKnown RBP13.48□□□□□ -0.25
PVT1-210ENST00000521122 MKRN1Q9UHC7 482 aaKnown RBP13.48□□□□□ -0.25
PVT1-210ENST00000521122 PRAM1Q96QH2 718 aa13.47□□□□□ -0.25
PVT1-210ENST00000521122 KAT6BQ8WYB5 2073 aa13.47□□□□□ -0.25
PVT1-210ENST00000521122 PIK3C2AO00443 1686 aa13.47□□□□□ -0.25
PVT1-210ENST00000521122 WDR17Q8IZU2 1322 aa13.46□□□□□ -0.25
PVT1-210ENST00000521122 PRPF38BQ5VTL8 546 aaKnown RBP13.46□□□□□ -0.25
PVT1-210ENST00000521122 C9orf131Q5VYM1 1079 aa13.46□□□□□ -0.25
PVT1-210ENST00000521122 GCP02774 474 aa13.45□□□□□ -0.26
PVT1-210ENST00000521122 CREBZFQ9NS37 354 aa13.45□□□□□ -0.26
PVT1-210ENST00000521122 WBP1LQ9NX94 342 aa13.45□□□□□ -0.26
PVT1-210ENST00000521122 PKD1L3Q7Z443 1732 aa13.44□□□□□ -0.26
PVT1-210ENST00000521122 HSPA8P11142 646 aaKnown RBP13.44□□□□□ -0.26
PVT1-210ENST00000521122 KCNQ4P56696 695 aa13.44□□□□□ -0.26
PVT1-210ENST00000521122 ARHGAP27Q6ZUM4 889 aa13.44□□□□□ -0.26
PVT1-210ENST00000521122 ABCC6O95255 1503 aa13.43□□□□□ -0.26
PVT1-210ENST00000521122 ROCK1Q13464 1354 aa13.43□□□□□ -0.26
PVT1-210ENST00000521122 PIK3C2GO75747 1445 aa13.42□□□□□ -0.26
PVT1-210ENST00000521122 CFAP44Q96MT7 982 aa13.42□□□□□ -0.26
PVT1-210ENST00000521122 CARD10Q9BWT7 1032 aa13.42□□□□□ -0.26
PVT1-210ENST00000521122 CNTNAP1P78357 1384 aa13.42□□□□□ -0.26
PVT1-210ENST00000521122 FAM50AQ14320 339 aaKnown RBP13.41□□□□□ -0.26
PVT1-210ENST00000521122 ABTB2Q8N961 1025 aa13.41□□□□□ -0.26
PVT1-210ENST00000521122 BCS1LQ9Y276 419 aa13.41□□□□□ -0.26
PVT1-210ENST00000521122 COL18A1P39060 1754 aa13.4□□□□□ -0.26
PVT1-210ENST00000521122 POGKQ9P215 609 aa13.4□□□□□ -0.26
PVT1-210ENST00000521122 CUL9Q8IWT3 2517 aa13.39□□□□□ -0.27
PVT1-210ENST00000521122 ZBTB7CA1YPR0 619 aa13.39□□□□□ -0.27
PVT1-210ENST00000521122 WASLO00401 505 aaPredicted RBP13.38□□□□□ -0.27
PVT1-210ENST00000521122 NLRP13Q86W25 1043 aa13.38□□□□□ -0.27
PVT1-210ENST00000521122 LY75O60449 1722 aa13.38□□□□□ -0.27
PVT1-210ENST00000521122 ITSN1Q15811 1721 aa13.38□□□□□ -0.27
PVT1-210ENST00000521122 FLAD1Q8NFF5 587 aa13.37□□□□□ -0.27
PVT1-210ENST00000521122 AXIN2Q9Y2T1 843 aa13.37□□□□□ -0.27
PVT1-210ENST00000521122 PPIP5K1Q6PFW1 1433 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms