RNA–Protein interactions for RNA: ENST00000520348.5

SNHG6-201, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2 BASIC

Gene SNHG6, Length 648 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-201ENST00000520348 GOLGA2Q08379 1002 aa21.15■□□□□ 0.98
SNHG6-201ENST00000520348 BRINP3Q76B58 766 aa21.15■□□□□ 0.98
SNHG6-201ENST00000520348 SLFN5Q08AF3 891 aa21.14■□□□□ 0.97
SNHG6-201ENST00000520348 WWC1Q8IX03 1113 aa21.14■□□□□ 0.97
SNHG6-201ENST00000520348 KDRP35968 1356 aa21.13■□□□□ 0.97
SNHG6-201ENST00000520348 HSP90AB2PQ58FF8 381 aa21.13■□□□□ 0.97
SNHG6-201ENST00000520348 DUSP27Q5VZP5 1158 aa21.13■□□□□ 0.97
SNHG6-201ENST00000520348 HOXC9P31274 260 aa21.12■□□□□ 0.97
SNHG6-201ENST00000520348 WDR63Q8IWG1 891 aa21.12■□□□□ 0.97
SNHG6-201ENST00000520348 ABCC6O95255 1503 aa21.12■□□□□ 0.97
SNHG6-201ENST00000520348 IGSF1Q8N6C5 1336 aa21.11■□□□□ 0.97
SNHG6-201ENST00000520348 MAPK8IP3Q9UPT6 1336 aa21.11■□□□□ 0.97
SNHG6-201ENST00000520348 TMPOP42166 694 aaKnown RBP21.11■□□□□ 0.97
SNHG6-201ENST00000520348 NUTM2GQ5VZR2 741 aa21.11■□□□□ 0.97
SNHG6-201ENST00000520348 SLAIN2Q9P270 581 aa21.11■□□□□ 0.97
SNHG6-201ENST00000520348 SOS2Q07890 1332 aaPredicted RBP21.1■□□□□ 0.97
SNHG6-201ENST00000520348 E9PSI1 815 aa21.1■□□□□ 0.97
SNHG6-201ENST00000520348 PRKAR2BP31323 418 aa21.1■□□□□ 0.97
SNHG6-201ENST00000520348 XPCQ01831 940 aaPredicted RBP21.1■□□□□ 0.97
SNHG6-201ENST00000520348 SUPT16HQ9Y5B9 1047 aaKnown RBP21.1■□□□□ 0.97
SNHG6-201ENST00000520348 SPATA31A3Q5VYP0 1347 aa21.09■□□□□ 0.97
SNHG6-201ENST00000520348 CAMTA1Q9Y6Y1 1673 aa21.09■□□□□ 0.97
SNHG6-201ENST00000520348 GCP02774 474 aa21.08■□□□□ 0.97
SNHG6-201ENST00000520348 AMPHP49418 695 aa21.08■□□□□ 0.97
SNHG6-201ENST00000520348 NCAPD2Q15021 1401 aa21.08■□□□□ 0.97
SNHG6-201ENST00000520348 ARHGEF25Q86VW2 580 aa21.08■□□□□ 0.97
SNHG6-201ENST00000520348 IP6K1Q92551 441 aa21.08■□□□□ 0.97
SNHG6-201ENST00000520348 SOX12O15370 315 aa21.07■□□□□ 0.96
SNHG6-201ENST00000520348 SPINK5Q9NQ38 1064 aaPredicted RBP21.07■□□□□ 0.96
SNHG6-201ENST00000520348 TRIM35Q9UPQ4 493 aa21.07■□□□□ 0.96
SNHG6-201ENST00000520348 RRP7AQ9Y3A4 280 aaKnown RBP21.07■□□□□ 0.96
SNHG6-201ENST00000520348 IL16Q14005 1332 aa21.06■□□□□ 0.96
SNHG6-201ENST00000520348 HMOX1P09601 288 aa21.05■□□□□ 0.96
SNHG6-201ENST00000520348 NFE2L2Q16236 605 aa21.05■□□□□ 0.96
SNHG6-201ENST00000520348 NEFLP07196 543 aa21.04■□□□□ 0.96
SNHG6-201ENST00000520348 DDX17Q92841 729 aaKnown RBP21.04■□□□□ 0.96
SNHG6-201ENST00000520348 PHACTR3Q96KR7 559 aa21.04■□□□□ 0.96
SNHG6-201ENST00000520348 COL18A1P39060 1754 aa21.04■□□□□ 0.96
SNHG6-201ENST00000520348 AHDC1Q5TGY3 1603 aaPredicted RBP21.04■□□□□ 0.96
SNHG6-201ENST00000520348 LMO7Q8WWI1 1683 aa21.03■□□□□ 0.96
SNHG6-201ENST00000520348 AEBP1Q8IUX7 1158 aa21.03■□□□□ 0.96
SNHG6-201ENST00000520348 RCAN3Q9UKA8 241 aa21.03■□□□□ 0.96
SNHG6-201ENST00000520348 ABCA3Q99758 1704 aa21.03■□□□□ 0.96
SNHG6-201ENST00000520348 CPDO75976 1380 aa21.02■□□□□ 0.96
SNHG6-201ENST00000520348 NEFMP07197 916 aa21.02■□□□□ 0.96
SNHG6-201ENST00000520348 ERICH6BQ5W0A0 696 aa21.02■□□□□ 0.96
SNHG6-201ENST00000520348 SULT6B1Q6IMI4 303 aa21.02■□□□□ 0.96
SNHG6-201ENST00000520348 EYA1Q99502 592 aa21.02■□□□□ 0.96
SNHG6-201ENST00000520348 DLG5Q8TDM6 1919 aa21.02■□□□□ 0.95
SNHG6-201ENST00000520348 RIPK4P57078 832 aa21■□□□□ 0.95
SNHG6-201ENST00000520348 NEUROD2Q15784 382 aa20.99■□□□□ 0.95
SNHG6-201ENST00000520348 FKBP8Q14318 412 aa20.98■□□□□ 0.95
SNHG6-201ENST00000520348 ROBO1Q9Y6N7 1651 aa20.98■□□□□ 0.95
SNHG6-201ENST00000520348 FAM208AQ9UK61 1670 aaKnown RBP20.96■□□□□ 0.95
SNHG6-201ENST00000520348 LMOD3Q0VAK6 560 aa20.96■□□□□ 0.95
SNHG6-201ENST00000520348 LMOD2Q6P5Q4 547 aa20.96■□□□□ 0.95
SNHG6-201ENST00000520348 MYH16Q9H6N6 1097 aa20.96■□□□□ 0.95
SNHG6-201ENST00000520348 RRP1P56182 461 aaKnown RBP20.95■□□□□ 0.94
SNHG6-201ENST00000520348 LRRC37A3O60309 1634 aa20.94■□□□□ 0.94
SNHG6-201ENST00000520348 COL22A1Q8NFW1 1626 aaPredicted RBP20.94■□□□□ 0.94
SNHG6-201ENST00000520348 PLEKHG2Q9H7P9 1386 aa20.94■□□□□ 0.94
SNHG6-201ENST00000520348 RGPD2P0DJD1 1756 aa20.93■□□□□ 0.94
SNHG6-201ENST00000520348 CALD1Q05682 793 aaKnown RBP20.93■□□□□ 0.94
SNHG6-201ENST00000520348 FANCIQ9NVI1 1328 aa20.92■□□□□ 0.94
SNHG6-201ENST00000520348 RGPD5Q99666 1765 aa20.92■□□□□ 0.94
SNHG6-201ENST00000520348 CT47B1P0C2W7 299 aaPredicted RBP20.91■□□□□ 0.94
SNHG6-201ENST00000520348 ZNF853P0CG23 659 aa20.91■□□□□ 0.94
SNHG6-201ENST00000520348 ERBB3P21860 1342 aa20.91■□□□□ 0.94
SNHG6-201ENST00000520348 NBPF6Q5VWK0 638 aa20.9■□□□□ 0.94
SNHG6-201ENST00000520348 NBPF4Q96M43 638 aa20.9■□□□□ 0.94
SNHG6-201ENST00000520348 GAS2L2Q8NHY3 880 aa20.89■□□□□ 0.93
SNHG6-201ENST00000520348 ANKRD24Q8TF21 1146 aa20.89■□□□□ 0.93
SNHG6-201ENST00000520348 IFT57Q9NWB7 429 aa20.89■□□□□ 0.93
SNHG6-201ENST00000520348 AXIN2Q9Y2T1 843 aa20.89■□□□□ 0.93
SNHG6-201ENST00000520348 KIAA0232Q92628 1395 aa20.88■□□□□ 0.93
SNHG6-201ENST00000520348 COL16A1Q07092 1604 aaPredicted RBP20.87■□□□□ 0.93
SNHG6-201ENST00000520348 HTATSF1O43719 755 aaKnown RBP20.87■□□□□ 0.93
SNHG6-201ENST00000520348 ZC3H6P61129 1189 aaKnown RBP20.87■□□□□ 0.93
SNHG6-201ENST00000520348 MTHFSDQ2M296 383 aaKnown RBP20.87■□□□□ 0.93
SNHG6-201ENST00000520348 CABLES1Q8TDN4 633 aa20.87■□□□□ 0.93
SNHG6-201ENST00000520348 LTV1Q96GA3 475 aaPredicted RBP20.87■□□□□ 0.93
SNHG6-201ENST00000520348 CRB1P82279 1406 aa20.87■□□□□ 0.93
SNHG6-201ENST00000520348 GNAI1P63096 354 aa20.84■□□□□ 0.93
SNHG6-201ENST00000520348 IRX6P78412 446 aaPredicted RBP20.83■□□□□ 0.93
SNHG6-201ENST00000520348 LRRC59Q96AG4 307 aaKnown RBP20.83■□□□□ 0.93
SNHG6-201ENST00000520348 CFAP44Q96MT7 982 aa20.83■□□□□ 0.93
SNHG6-201ENST00000520348 MAP3K5Q99683 1374 aa20.83■□□□□ 0.92
SNHG6-201ENST00000520348 ADAMTS7Q9UKP4 1686 aa20.83■□□□□ 0.92
SNHG6-201ENST00000520348 ZBTB7CA1YPR0 619 aa20.82■□□□□ 0.92
SNHG6-201ENST00000520348 TSR2Q969E8 191 aaKnown RBP20.82■□□□□ 0.92
SNHG6-201ENST00000520348 THUMPD2Q9BTF0 503 aaKnown RBP20.82■□□□□ 0.92
SNHG6-201ENST00000520348 FAM83GA6ND36 823 aa20.81■□□□□ 0.92
SNHG6-201ENST00000520348 RARSP54136 660 aaKnown RBP20.81■□□□□ 0.92
SNHG6-201ENST00000520348 USHBP1Q8N6Y0 703 aa20.81■□□□□ 0.92
SNHG6-201ENST00000520348 COL5A2P05997 1499 aaPredicted RBP20.81■□□□□ 0.92
SNHG6-201ENST00000520348 OVOS2A0A0G2JMS6 1433 aa20.8■□□□□ 0.92
SNHG6-201ENST00000520348 EXOSC9Q06265 439 aaKnown RBP20.8■□□□□ 0.92
SNHG6-201ENST00000520348 PHLPP1O60346 1717 aa20.8■□□□□ 0.92
SNHG6-201ENST00000520348 PKD1L3Q7Z443 1732 aa20.79■□□□□ 0.92
SNHG6-201ENST00000520348 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms