RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 L3MBTL2Q969R5 705 aa12.65□□□□□ -0.38
PABPC1-213ENST00000519848 PSME1Q06323 249 aa12.64□□□□□ -0.39
PABPC1-213ENST00000519848 NUTM2GQ5VZR2 741 aa12.64□□□□□ -0.39
PABPC1-213ENST00000519848 CDK19Q9BWU1 502 aa12.64□□□□□ -0.39
PABPC1-213ENST00000519848 KIAA0232Q92628 1395 aa12.64□□□□□ -0.39
PABPC1-213ENST00000519848 AKAP12Q02952 1782 aa12.64□□□□□ -0.39
PABPC1-213ENST00000519848 NBPF8Q3BBV2 869 aa12.63□□□□□ -0.39
PABPC1-213ENST00000519848 FAM182BQ5T319 152 aa12.63□□□□□ -0.39
PABPC1-213ENST00000519848 DEFB132Q7Z7B7 95 aa12.63□□□□□ -0.39
PABPC1-213ENST00000519848 SEPT12Q8IYM1 358 aa12.63□□□□□ -0.39
PABPC1-213ENST00000519848 COL18A1P39060 1754 aa12.63□□□□□ -0.39
PABPC1-213ENST00000519848 ACEP12821 1306 aa12.62□□□□□ -0.39
PABPC1-213ENST00000519848 EIF3AQ14152 1382 aaKnown RBP12.62□□□□□ -0.39
PABPC1-213ENST00000519848 CHRNA2Q15822 529 aa12.62□□□□□ -0.39
PABPC1-213ENST00000519848 SLIT3O75094 1523 aa12.62□□□□□ -0.39
PABPC1-213ENST00000519848 PPIP5K1Q6PFW1 1433 aa12.62□□□□□ -0.39
PABPC1-213ENST00000519848 SSH2Q76I76 1423 aa12.62□□□□□ -0.39
PABPC1-213ENST00000519848 GPRASP1Q5JY77 1395 aa12.61□□□□□ -0.39
PABPC1-213ENST00000519848 WNK3Q9BYP7 1800 aa12.61□□□□□ -0.39
PABPC1-213ENST00000519848 ONECUT3O60422 494 aaPredicted RBP12.61□□□□□ -0.39
PABPC1-213ENST00000519848 TIE1P35590 1138 aa12.61□□□□□ -0.39
PABPC1-213ENST00000519848 BTG4Q9NY30 223 aa12.61□□□□□ -0.39
PABPC1-213ENST00000519848 USP19O94966 1318 aa12.61□□□□□ -0.39
PABPC1-213ENST00000519848 CABP2Q9NPB3 220 aa12.6□□□□□ -0.39
PABPC1-213ENST00000519848 BLMP54132 1417 aaPredicted RBP12.6□□□□□ -0.39
PABPC1-213ENST00000519848 MON2Q7Z3U7 1717 aa12.59□□□□□ -0.39
PABPC1-213ENST00000519848 RGPD5Q99666 1765 aa12.59□□□□□ -0.39
PABPC1-213ENST00000519848 SRCAPQ6ZRS2 3230 aa12.59□□□□□ -0.39
PABPC1-213ENST00000519848 FAM98CQ17RN3 349 aaKnown RBP12.59□□□□□ -0.39
PABPC1-213ENST00000519848 NGDNQ8NEJ9 315 aaKnown RBP12.59□□□□□ -0.39
PABPC1-213ENST00000519848 USP6P35125 1406 aa12.59□□□□□ -0.39
PABPC1-213ENST00000519848 SPATA31A5Q5VU36 1347 aa12.59□□□□□ -0.39
PABPC1-213ENST00000519848 SPATA31A7Q8IWB4 1347 aa12.59□□□□□ -0.39
PABPC1-213ENST00000519848 CENPJQ9HC77 1338 aaPredicted RBP12.59□□□□□ -0.39
PABPC1-213ENST00000519848 LRRC37A3O60309 1634 aa12.59□□□□□ -0.39
PABPC1-213ENST00000519848 PLEKHG3A1L390 1219 aa12.58□□□□□ -0.4
PABPC1-213ENST00000519848 MAP3K13O43283 966 aa12.58□□□□□ -0.4
PABPC1-213ENST00000519848 RGPD1P0DJD0 1748 aa12.58□□□□□ -0.4
PABPC1-213ENST00000519848 HAP1P54257 671 aaPredicted RBP12.58□□□□□ -0.4
PABPC1-213ENST00000519848 STAC3Q96MF2 364 aa12.58□□□□□ -0.4
PABPC1-213ENST00000519848 PEAK1Q9H792 1746 aa12.58□□□□□ -0.4
PABPC1-213ENST00000519848 CD163L1Q9NR16 1453 aa12.58□□□□□ -0.4
PABPC1-213ENST00000519848 ST18O60284 1047 aa12.56□□□□□ -0.4
PABPC1-213ENST00000519848 ZC3H6P61129 1189 aaKnown RBP12.56□□□□□ -0.4
PABPC1-213ENST00000519848 COL5A2P05997 1499 aaPredicted RBP12.56□□□□□ -0.4
PABPC1-213ENST00000519848 PARP4Q9UKK3 1724 aaKnown RBP12.56□□□□□ -0.4
PABPC1-213ENST00000519848 NFAT5O94916 1531 aa12.56□□□□□ -0.4
PABPC1-213ENST00000519848 SPATA31A1Q5TZJ5 1347 aa12.56□□□□□ -0.4
PABPC1-213ENST00000519848 USP54Q70EL1 1684 aa12.55□□□□□ -0.4
PABPC1-213ENST00000519848 RREB1Q92766 1687 aa12.55□□□□□ -0.4
PABPC1-213ENST00000519848 TTLL13PA6NNM8 815 aa12.55□□□□□ -0.4
PABPC1-213ENST00000519848 PRDM11Q9NQV5 511 aa12.55□□□□□ -0.4
PABPC1-213ENST00000519848 CCDC9Q9Y3X0 531 aaKnown RBP12.55□□□□□ -0.4
PABPC1-213ENST00000519848 NUP188Q5SRE5 1749 aa12.54□□□□□ -0.4
PABPC1-213ENST00000519848 SEC24BO95487 1268 aa12.54□□□□□ -0.4
PABPC1-213ENST00000519848 NEUROD1Q13562 356 aa12.54□□□□□ -0.4
PABPC1-213ENST00000519848 KRT27Q7Z3Y8 459 aa12.54□□□□□ -0.4
PABPC1-213ENST00000519848 CPDO75976 1380 aa12.54□□□□□ -0.4
PABPC1-213ENST00000519848 CPSF1Q10570 1443 aaKnown RBP12.53□□□□□ -0.4
PABPC1-213ENST00000519848 LRP5O75197 1615 aa12.52□□□□□ -0.4
PABPC1-213ENST00000519848 SRPK2P78362 688 aaKnown RBP12.52□□□□□ -0.41
PABPC1-213ENST00000519848 LARP1Q6PKG0 1096 aaKnown RBP12.52□□□□□ -0.41
PABPC1-213ENST00000519848 STRN4Q9NRL3 753 aa12.52□□□□□ -0.41
PABPC1-213ENST00000519848 CABP1Q9NZU7 370 aa12.52□□□□□ -0.41
PABPC1-213ENST00000519848 ROCK2O75116 1388 aaKnown RBP12.52□□□□□ -0.41
PABPC1-213ENST00000519848 SBF2Q86WG5 1849 aa12.51□□□□□ -0.41
PABPC1-213ENST00000519848 MMRN1Q13201 1228 aa12.51□□□□□ -0.41
PABPC1-213ENST00000519848 DISP2A7MBM2 1401 aa12.5□□□□□ -0.41
PABPC1-213ENST00000519848 ABTB2Q8N961 1025 aa12.49□□□□□ -0.41
PABPC1-213ENST00000519848 LTN1O94822 1766 aa12.48□□□□□ -0.41
PABPC1-213ENST00000519848 A0A0G2JS52 829 aa12.48□□□□□ -0.41
PABPC1-213ENST00000519848 GCP02774 474 aa12.48□□□□□ -0.41
PABPC1-213ENST00000519848 MYT1Q01538 1121 aa12.48□□□□□ -0.41
PABPC1-213ENST00000519848 PTF1AQ7RTS3 328 aa12.48□□□□□ -0.41
PABPC1-213ENST00000519848 USP35Q9P2H5 1018 aa12.48□□□□□ -0.41
PABPC1-213ENST00000519848 AXIN2Q9Y2T1 843 aa12.48□□□□□ -0.41
PABPC1-213ENST00000519848 SBNO2Q9Y2G9 1366 aa12.47□□□□□ -0.41
PABPC1-213ENST00000519848 PSDA5PKW4 1024 aaPredicted RBP12.47□□□□□ -0.41
PABPC1-213ENST00000519848 EN1Q05925 392 aaPredicted RBP12.47□□□□□ -0.41
PABPC1-213ENST00000519848 SPNS2Q8IVW8 549 aa12.47□□□□□ -0.41
PABPC1-213ENST00000519848 SLAIN1Q8ND83 568 aa12.47□□□□□ -0.41
PABPC1-213ENST00000519848 IER5LQ5T953 404 aa12.46□□□□□ -0.41
PABPC1-213ENST00000519848 CCDC125Q86Z20 511 aa12.46□□□□□ -0.41
PABPC1-213ENST00000519848 RASEFQ8IZ41 740 aa12.46□□□□□ -0.41
PABPC1-213ENST00000519848 TRIM35Q9UPQ4 493 aa12.46□□□□□ -0.41
PABPC1-213ENST00000519848 AATKQ6ZMQ8 1374 aa12.45□□□□□ -0.42
PABPC1-213ENST00000519848 TTC21BQ7Z4L5 1316 aa12.45□□□□□ -0.42
PABPC1-213ENST00000519848 CRB1P82279 1406 aa12.45□□□□□ -0.42
PABPC1-213ENST00000519848 MYOM1P52179 1685 aa12.45□□□□□ -0.42
PABPC1-213ENST00000519848 EZH2Q15910 746 aaKnown RBP12.44□□□□□ -0.42
PABPC1-213ENST00000519848 BARGINQ6ZT62 677 aa12.44□□□□□ -0.42
PABPC1-213ENST00000519848 PROM2Q8N271 834 aa12.44□□□□□ -0.42
PABPC1-213ENST00000519848 EVC2Q86UK5 1308 aa12.43□□□□□ -0.42
PABPC1-213ENST00000519848 TRIM37O94972 964 aa12.43□□□□□ -0.42
PABPC1-213ENST00000519848 NLRP6P59044 892 aa12.43□□□□□ -0.42
PABPC1-213ENST00000519848 TESK2Q96S53 571 aa12.43□□□□□ -0.42
PABPC1-213ENST00000519848 OVOS2A0A0J9YW53 1432 aa12.43□□□□□ -0.42
PABPC1-213ENST00000519848 OVOS2Q6IE36 1432 aa12.43□□□□□ -0.42
PABPC1-213ENST00000519848 RGPD2P0DJD1 1756 aa12.43□□□□□ -0.42
PABPC1-213ENST00000519848 A0A1W2PP64 1363 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms