RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 GRM5P41594 1212 aa12.29□□□□□ -0.44
PTPN12-213ENST00000519553 NBPF20Q3BBV1 942 aa12.29□□□□□ -0.44
PTPN12-213ENST00000519553 VASH1Q7L8A9 365 aaPredicted RBP12.29□□□□□ -0.44
PTPN12-213ENST00000519553 TOR4AQ9NXH8 423 aa12.29□□□□□ -0.44
PTPN12-213ENST00000519553 ARID5BQ14865 1188 aa12.28□□□□□ -0.44
PTPN12-213ENST00000519553 SNIP1Q8TAD8 396 aaKnown RBP12.28□□□□□ -0.44
PTPN12-213ENST00000519553 KCTD15Q96SI1 283 aaPredicted RBP12.28□□□□□ -0.44
PTPN12-213ENST00000519553 PIK3CDO00329 1044 aa12.27□□□□□ -0.45
PTPN12-213ENST00000519553 GIGYF1O75420 1035 aaPredicted RBP12.27□□□□□ -0.45
PTPN12-213ENST00000519553 ADH1CP00326 375 aa12.27□□□□□ -0.45
PTPN12-213ENST00000519553 PHTF2Q8N3S3 785 aa12.27□□□□□ -0.45
PTPN12-213ENST00000519553 FSHRP23945 695 aa12.26□□□□□ -0.45
PTPN12-213ENST00000519553 INTS6LQ5JSJ4 861 aaKnown RBP12.26□□□□□ -0.45
PTPN12-213ENST00000519553 ALDH1A1P00352 501 aa12.25□□□□□ -0.45
PTPN12-213ENST00000519553 CCDC82Q8N4S0 544 aa12.25□□□□□ -0.45
PTPN12-213ENST00000519553 J3QL48 77 aa12.24□□□□□ -0.45
PTPN12-213ENST00000519553 CYP4X1Q8N118 509 aa12.24□□□□□ -0.45
PTPN12-213ENST00000519553 CHIC2Q9UKJ5 165 aa12.24□□□□□ -0.45
PTPN12-213ENST00000519553 SEPT12Q8IYM1 358 aa12.23□□□□□ -0.45
PTPN12-213ENST00000519553 PDZRN3Q9UPQ7 1066 aa12.23□□□□□ -0.45
PTPN12-213ENST00000519553 TTC24A2A3L6 582 aaPredicted RBP12.22□□□□□ -0.45
PTPN12-213ENST00000519553 NR3C2P08235 984 aa12.22□□□□□ -0.45
PTPN12-213ENST00000519553 SMPD1P17405 629 aa12.22□□□□□ -0.45
PTPN12-213ENST00000519553 SLFNL1Q499Z3 407 aa12.22□□□□□ -0.45
PTPN12-213ENST00000519553 CCDC85AQ96PX6 553 aaPredicted RBP12.22□□□□□ -0.45
PTPN12-213ENST00000519553 NR5A1Q13285 461 aa12.21□□□□□ -0.45
PTPN12-213ENST00000519553 TBC1D9Q6ZT07 1266 aa12.21□□□□□ -0.45
PTPN12-213ENST00000519553 RNF135Q8IUD6 432 aa12.21□□□□□ -0.45
PTPN12-213ENST00000519553 NFATC2IPQ8NCF5 419 aa12.21□□□□□ -0.45
PTPN12-213ENST00000519553 PPP1R12CQ9BZL4 782 aa12.2□□□□□ -0.46
PTPN12-213ENST00000519553 RAB15P59190 212 aa12.19□□□□□ -0.46
PTPN12-213ENST00000519553 NNTQ13423 1086 aa12.19□□□□□ -0.46
PTPN12-213ENST00000519553 TSGA10IPQ3SY00 556 aa12.19□□□□□ -0.46
PTPN12-213ENST00000519553 WASF2Q9Y6W5 498 aa12.19□□□□□ -0.46
PTPN12-213ENST00000519553 PALM3A6NDB9 673 aaPredicted RBP12.18□□□□□ -0.46
PTPN12-213ENST00000519553 ATP9BO43861 1147 aa12.18□□□□□ -0.46
PTPN12-213ENST00000519553 RNF20Q5VTR2 975 aa12.18□□□□□ -0.46
PTPN12-213ENST00000519553 TRAF7Q6Q0C0 670 aa12.18□□□□□ -0.46
PTPN12-213ENST00000519553 CCDC116Q8IYX3 515 aa12.18□□□□□ -0.46
PTPN12-213ENST00000519553 CCDC97Q96F63 343 aaPredicted RBP12.18□□□□□ -0.46
PTPN12-213ENST00000519553 SERPINA10Q9UK55 444 aa12.18□□□□□ -0.46
PTPN12-213ENST00000519553 ERVH48-1M5A8F1 160 aa12.17□□□□□ -0.46
PTPN12-213ENST00000519553 CFAP70Q5T0N1 1121 aa12.17□□□□□ -0.46
PTPN12-213ENST00000519553 PLPP7Q8NBV4 271 aa12.17□□□□□ -0.46
PTPN12-213ENST00000519553 TFIP11Q9UBB9 837 aaKnown RBP12.17□□□□□ -0.46
PTPN12-213ENST00000519553 MAFBQ9Y5Q3 323 aaPredicted RBP12.17□□□□□ -0.46
PTPN12-213ENST00000519553 SKIP12755 728 aa12.16□□□□□ -0.46
PTPN12-213ENST00000519553 USP17L5A8MUK1 530 aa12.15□□□□□ -0.46
PTPN12-213ENST00000519553 PPP1R26Q5T8A7 1209 aaPredicted RBP12.15□□□□□ -0.46
PTPN12-213ENST00000519553 CCDC125Q86Z20 511 aa12.15□□□□□ -0.46
PTPN12-213ENST00000519553 KLF16Q9BXK1 252 aaPredicted RBP12.15□□□□□ -0.46
PTPN12-213ENST00000519553 HPS1Q92902 700 aa12.14□□□□□ -0.47
PTPN12-213ENST00000519553 CDCA7Q9BWT1 371 aaPredicted RBP12.14□□□□□ -0.47
PTPN12-213ENST00000519553 TMPRSS4Q9NRS4 437 aa12.14□□□□□ -0.47
PTPN12-213ENST00000519553 DOLKQ9UPQ8 538 aa12.14□□□□□ -0.47
PTPN12-213ENST00000519553 PCDHB11Q9Y5F2 797 aa12.14□□□□□ -0.47
PTPN12-213ENST00000519553 DHX9Q08211 1270 aaKnown RBP12.13□□□□□ -0.47
PTPN12-213ENST00000519553 MAP7D1Q3KQU3 841 aa12.13□□□□□ -0.47
PTPN12-213ENST00000519553 PLEKHM2Q8IWE5 1019 aa12.13□□□□□ -0.47
PTPN12-213ENST00000519553 USP17L3A6NCW0 530 aa12.12□□□□□ -0.47
PTPN12-213ENST00000519553 USP17L4A6NCW7 530 aa12.12□□□□□ -0.47
PTPN12-213ENST00000519553 NRG2O14511 850 aaPredicted RBP12.12□□□□□ -0.47
PTPN12-213ENST00000519553 GFRA3O60609 400 aa12.12□□□□□ -0.47
PTPN12-213ENST00000519553 USP17L2Q6R6M4 530 aa12.12□□□□□ -0.47
PTPN12-213ENST00000519553 USP17L1Q7RTZ2 530 aa12.12□□□□□ -0.47
PTPN12-213ENST00000519553 ZNF784Q8NCA9 323 aaPredicted RBP12.12□□□□□ -0.47
PTPN12-213ENST00000519553 SCTRP47872 440 aa12.11□□□□□ -0.47
PTPN12-213ENST00000519553 NCOA4Q13772 614 aa12.11□□□□□ -0.47
PTPN12-213ENST00000519553 DEPDC4Q8N2C3 294 aa12.11□□□□□ -0.47
PTPN12-213ENST00000519553 ARID3AQ99856 593 aa12.11□□□□□ -0.47
PTPN12-213ENST00000519553 EMILIN1Q9Y6C2 1016 aa12.11□□□□□ -0.47
PTPN12-213ENST00000519553 FAM187AA6NFU0 413 aa12.1□□□□□ -0.47
PTPN12-213ENST00000519553 LILRA1O75019 489 aa12.1□□□□□ -0.47
PTPN12-213ENST00000519553 TIMP2P16035 220 aa12.1□□□□□ -0.47
PTPN12-213ENST00000519553 ERVK-9P63128 1117 aa12.1□□□□□ -0.47
PTPN12-213ENST00000519553 ITPKCQ96DU7 683 aa12.1□□□□□ -0.47
PTPN12-213ENST00000519553 LMOD1P29536 600 aaPredicted RBP12.09□□□□□ -0.47
PTPN12-213ENST00000519553 OXLD1Q5BKU9 147 aa12.09□□□□□ -0.47
PTPN12-213ENST00000519553 WDR4P57081 412 aaKnown RBP12.08□□□□□ -0.48
PTPN12-213ENST00000519553 ZFAND3Q9H8U3 227 aa12.08□□□□□ -0.48
PTPN12-213ENST00000519553 CYLDQ9NQC7 956 aa12.08□□□□□ -0.48
PTPN12-213ENST00000519553 LZTS3O60299 673 aaPredicted RBP12.07□□□□□ -0.48
PTPN12-213ENST00000519553 ZIC2O95409 532 aaPredicted RBP12.07□□□□□ -0.48
PTPN12-213ENST00000519553 AVPP01185 164 aa12.07□□□□□ -0.48
PTPN12-213ENST00000519553 PGPEP1Q9NXJ5 209 aa12.07□□□□□ -0.48
PTPN12-213ENST00000519553 RFX1P22670 979 aa12.06□□□□□ -0.48
PTPN12-213ENST00000519553 SRPK2P78362 688 aaKnown RBP12.06□□□□□ -0.48
PTPN12-213ENST00000519553 EML3Q32P44 896 aa12.06□□□□□ -0.48
PTPN12-213ENST00000519553 CC2D2BQ6DHV5 1058 aa12.06□□□□□ -0.48
PTPN12-213ENST00000519553 MYT1Q01538 1121 aa12.05□□□□□ -0.48
PTPN12-213ENST00000519553 LAPTM4AQ15012 233 aa12.05□□□□□ -0.48
PTPN12-213ENST00000519553 KANK4Q5T7N3 995 aaPredicted RBP12.05□□□□□ -0.48
PTPN12-213ENST00000519553 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.04□□□□□ -0.48
PTPN12-213ENST00000519553 DGAT1O75907 488 aa12.04□□□□□ -0.48
PTPN12-213ENST00000519553 ADD1P35611 737 aaKnown RBP12.04□□□□□ -0.48
PTPN12-213ENST00000519553 IRX2Q9BZI1 471 aaPredicted RBP12.04□□□□□ -0.48
PTPN12-213ENST00000519553 OSBPL3Q9H4L5 887 aa12.04□□□□□ -0.48
PTPN12-213ENST00000519553 USP4Q13107 963 aa12.03□□□□□ -0.48
PTPN12-213ENST00000519553 CBLBQ13191 982 aa12.03□□□□□ -0.48
PTPN12-213ENST00000519553 PKDCCQ504Y2 493 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms