RNA–Protein interactions for RNA: ENST00000519524.1

POLB-206, Transcript of DNA polymerase beta, humanhuman

TSL 5

Gene POLB, Length 655 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-206ENST00000519524 VPS8Q8N3P4 1428 aa12.9□□□□□ -0.34
POLB-206ENST00000519524 TBC1D2Q9BYX2 928 aa12.9□□□□□ -0.34
POLB-206ENST00000519524 RSPH6AQ9H0K4 717 aa12.9□□□□□ -0.34
POLB-206ENST00000519524 ZNF142P52746 1687 aaPredicted RBP12.89□□□□□ -0.35
POLB-206ENST00000519524 WNT2BQ93097 391 aa12.89□□□□□ -0.35
POLB-206ENST00000519524 PCMTD1Q96MG8 357 aaPredicted RBP12.89□□□□□ -0.35
POLB-206ENST00000519524 RABGEF1Q9UJ41 708 aa12.89□□□□□ -0.35
POLB-206ENST00000519524 LRRC9Q6ZRR7 1453 aa12.89□□□□□ -0.35
POLB-206ENST00000519524 ITGBL1O95965 494 aaPredicted RBP12.88□□□□□ -0.35
POLB-206ENST00000519524 POLR3EQ9NVU0 708 aa12.88□□□□□ -0.35
POLB-206ENST00000519524 TCOF1Q13428 1488 aaKnown RBP12.88□□□□□ -0.35
POLB-206ENST00000519524 SPIRE2Q8WWL2 714 aa12.87□□□□□ -0.35
POLB-206ENST00000519524 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.87□□□□□ -0.35
POLB-206ENST00000519524 A2ML1A8K2U0 1454 aa12.86□□□□□ -0.35
POLB-206ENST00000519524 PLA2R1Q13018 1463 aa12.86□□□□□ -0.35
POLB-206ENST00000519524 TNRQ92752 1358 aa12.86□□□□□ -0.35
POLB-206ENST00000519524 DDX11L8A8MPP1 907 aa12.86□□□□□ -0.35
POLB-206ENST00000519524 BHMG1C9JSJ3 638 aaPredicted RBP12.86□□□□□ -0.35
POLB-206ENST00000519524 KDM5DQ9BY66 1539 aa12.86□□□□□ -0.35
POLB-206ENST00000519524 DNMT1P26358 1616 aaKnown RBP12.85□□□□□ -0.35
POLB-206ENST00000519524 DISP3Q9P2K9 1392 aa12.85□□□□□ -0.35
POLB-206ENST00000519524 GOLGA8CPA6NN73 597 aa12.85□□□□□ -0.35
POLB-206ENST00000519524 SEPT9Q9UHD8 586 aaPredicted RBP12.85□□□□□ -0.35
POLB-206ENST00000519524 ARHGEF5Q12774 1597 aa12.85□□□□□ -0.35
POLB-206ENST00000519524 PZPP20742 1482 aa12.85□□□□□ -0.35
POLB-206ENST00000519524 ILDR2Q71H61 639 aa12.84□□□□□ -0.35
POLB-206ENST00000519524 LIMD1Q9UGP4 676 aa12.84□□□□□ -0.35
POLB-206ENST00000519524 WASHC2CQ9Y4E1 1318 aa12.84□□□□□ -0.35
POLB-206ENST00000519524 GFRA3O60609 400 aa12.83□□□□□ -0.36
POLB-206ENST00000519524 SULF1Q8IWU6 871 aa12.83□□□□□ -0.36
POLB-206ENST00000519524 NEURL4Q96JN8 1562 aa12.82□□□□□ -0.36
POLB-206ENST00000519524 SLC10A3P09131 477 aa12.82□□□□□ -0.36
POLB-206ENST00000519524 TSPY4P0CV99 314 aa12.82□□□□□ -0.36
POLB-206ENST00000519524 TSPY10P0CW01 314 aa12.82□□□□□ -0.36
POLB-206ENST00000519524 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.81□□□□□ -0.36
POLB-206ENST00000519524 UBAP1LF5GYI3 381 aa12.81□□□□□ -0.36
POLB-206ENST00000519524 SWT1Q5T5J6 900 aaKnown RBP12.81□□□□□ -0.36
POLB-206ENST00000519524 ABCC3O15438 1527 aa12.81□□□□□ -0.36
POLB-206ENST00000519524 MYOM3Q5VTT5 1437 aa12.8□□□□□ -0.36
POLB-206ENST00000519524 CLK2P49760 499 aaKnown RBP12.8□□□□□ -0.36
POLB-206ENST00000519524 IQSEC2Q5JU85 1478 aa12.79□□□□□ -0.36
POLB-206ENST00000519524 SPATA31D1Q6ZQQ2 1576 aa12.79□□□□□ -0.36
POLB-206ENST00000519524 MAST1Q9Y2H9 1570 aa12.79□□□□□ -0.36
POLB-206ENST00000519524 RSPH4AQ5TD94 716 aa12.79□□□□□ -0.36
POLB-206ENST00000519524 MROH1Q8NDA8 1641 aa12.79□□□□□ -0.36
POLB-206ENST00000519524 MIA2Q96PC5 1412 aa12.79□□□□□ -0.36
POLB-206ENST00000519524 RNF17Q9BXT8 1623 aaKnown RBP12.78□□□□□ -0.36
POLB-206ENST00000519524 MOXD2PA6NHM9 499 aa12.78□□□□□ -0.36
POLB-206ENST00000519524 SPTLC1O15269 473 aa12.78□□□□□ -0.36
POLB-206ENST00000519524 DIXDC1Q155Q3 683 aa12.78□□□□□ -0.36
POLB-206ENST00000519524 FAM98CQ17RN3 349 aaKnown RBP12.78□□□□□ -0.36
POLB-206ENST00000519524 RIC3Q7Z5B4 369 aa12.78□□□□□ -0.36
POLB-206ENST00000519524 MRPL50Q8N5N7 158 aaKnown RBP12.78□□□□□ -0.36
POLB-206ENST00000519524 ZNF775Q96BV0 537 aaPredicted RBP12.77□□□□□ -0.37
POLB-206ENST00000519524 ZMYND15Q9H091 742 aa12.77□□□□□ -0.37
POLB-206ENST00000519524 ERVK-7P63135 1459 aa12.77□□□□□ -0.37
POLB-206ENST00000519524 FAM135AQ9P2D6 1515 aa12.77□□□□□ -0.37
POLB-206ENST00000519524 UGGT1Q9NYU2 1555 aa12.77□□□□□ -0.37
POLB-206ENST00000519524 CEP152O94986 1710 aa12.76□□□□□ -0.37
POLB-206ENST00000519524 POLR1AO95602 1720 aaPredicted RBP12.76□□□□□ -0.37
POLB-206ENST00000519524 GCGRP47871 477 aa12.76□□□□□ -0.37
POLB-206ENST00000519524 TUSC1Q2TAM9 212 aa12.76□□□□□ -0.37
POLB-206ENST00000519524 ZNF787Q6DD87 383 aa12.76□□□□□ -0.37
POLB-206ENST00000519524 RSBN1LQ6PCB5 846 aaPredicted RBP12.76□□□□□ -0.37
POLB-206ENST00000519524 ABCC5O15440 1437 aa12.76□□□□□ -0.37
POLB-206ENST00000519524 MAP3K1Q13233 1512 aa12.76□□□□□ -0.37
POLB-206ENST00000519524 NDUFV2P19404 249 aa12.75□□□□□ -0.37
POLB-206ENST00000519524 KIF15Q9NS87 1388 aa12.75□□□□□ -0.37
POLB-206ENST00000519524 RRP7BPQ9NSQ0 103 aa12.75□□□□□ -0.37
POLB-206ENST00000519524 NLRP1Q9C000 1473 aa12.74□□□□□ -0.37
POLB-206ENST00000519524 NPHP4O75161 1426 aaPredicted RBP12.74□□□□□ -0.37
POLB-206ENST00000519524 PIP4K2BP78356 416 aa12.74□□□□□ -0.37
POLB-206ENST00000519524 FLIIQ13045 1269 aa12.74□□□□□ -0.37
POLB-206ENST00000519524 PPP2R2DQ66LE6 453 aa12.74□□□□□ -0.37
POLB-206ENST00000519524 RDH13Q8NBN7 331 aa12.74□□□□□ -0.37
POLB-206ENST00000519524 PTPN23Q9H3S7 1636 aa12.73□□□□□ -0.37
POLB-206ENST00000519524 VWDEQ8N2E2 1590 aa12.73□□□□□ -0.37
POLB-206ENST00000519524 SHANK2Q9UPX8 1470 aa12.73□□□□□ -0.37
POLB-206ENST00000519524 SAMD7Q7Z3H4 446 aa12.73□□□□□ -0.37
POLB-206ENST00000519524 LAPTM4BQ86VI4 370 aa12.73□□□□□ -0.37
POLB-206ENST00000519524 ANKLE2Q86XL3 938 aa12.73□□□□□ -0.37
POLB-206ENST00000519524 NUTM1Q86Y26 1132 aa12.73□□□□□ -0.37
POLB-206ENST00000519524 PCDHB15Q9Y5E8 787 aa12.73□□□□□ -0.37
POLB-206ENST00000519524 EIF2AK4Q9P2K8 1649 aaKnown RBP12.73□□□□□ -0.37
POLB-206ENST00000519524 DUOX2Q9NRD8 1548 aa12.72□□□□□ -0.37
POLB-206ENST00000519524 CFAP65Q6ZU64 1925 aaKnown RBP12.72□□□□□ -0.37
POLB-206ENST00000519524 KDM4AO75164 1064 aa12.72□□□□□ -0.37
POLB-206ENST00000519524 GJA5P36382 358 aa12.72□□□□□ -0.37
POLB-206ENST00000519524 MCM6Q14566 821 aa12.72□□□□□ -0.37
POLB-206ENST00000519524 CHIC2Q9UKJ5 165 aa12.72□□□□□ -0.37
POLB-206ENST00000519524 DAPK1P53355 1430 aa12.71□□□□□ -0.37
POLB-206ENST00000519524 CROCC2H7BZ55 1655 aa12.71□□□□□ -0.37
POLB-206ENST00000519524 ZC3H13Q5T200 1668 aaKnown RBP12.71□□□□□ -0.37
POLB-206ENST00000519524 HSPA1LP34931 641 aa12.71□□□□□ -0.37
POLB-206ENST00000519524 RFC5P40937 340 aa12.71□□□□□ -0.37
POLB-206ENST00000519524 THEMISQ8N1K5 641 aaPredicted RBP12.71□□□□□ -0.37
POLB-206ENST00000519524 FGD6Q6ZV73 1430 aa12.71□□□□□ -0.38
POLB-206ENST00000519524 QPCTQ16769 361 aa12.7□□□□□ -0.38
POLB-206ENST00000519524 CPS1P31327 1500 aa12.69□□□□□ -0.38
POLB-206ENST00000519524 PRDM15P57071 1507 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms