RNA–Protein interactions for RNA: ENST00000518842.1

LAMA4-211, Transcript of laminin subunit alpha 4, humanhuman

TSL 3

Gene LAMA4, Length 480 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-211ENST00000518842 CABLES1Q8TDN4 633 aa12.93□□□□□ -0.34
LAMA4-211ENST00000518842 CENPJQ9HC77 1338 aaPredicted RBP12.92□□□□□ -0.34
LAMA4-211ENST00000518842 PLEKHG3A1L390 1219 aa12.92□□□□□ -0.34
LAMA4-211ENST00000518842 ST18O60284 1047 aa12.92□□□□□ -0.34
LAMA4-211ENST00000518842 UNC5CLQ8IV45 518 aa12.92□□□□□ -0.34
LAMA4-211ENST00000518842 ALS2Q96Q42 1657 aa12.92□□□□□ -0.34
LAMA4-211ENST00000518842 MARF1Q9Y4F3 1742 aaKnown RBP12.91□□□□□ -0.34
LAMA4-211ENST00000518842 NGDNQ8NEJ9 315 aaKnown RBP12.91□□□□□ -0.34
LAMA4-211ENST00000518842 ABCA3Q99758 1704 aa12.91□□□□□ -0.34
LAMA4-211ENST00000518842 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.91□□□□□ -0.34
LAMA4-211ENST00000518842 TOPAZ1Q8N9V7 1692 aa12.9□□□□□ -0.34
LAMA4-211ENST00000518842 SNPHO15079 494 aa12.9□□□□□ -0.34
LAMA4-211ENST00000518842 GJD4Q96KN9 370 aaPredicted RBP12.9□□□□□ -0.34
LAMA4-211ENST00000518842 RALGAPBQ86X10 1494 aa12.9□□□□□ -0.34
LAMA4-211ENST00000518842 TRPM1Q7Z4N2 1603 aa12.89□□□□□ -0.35
LAMA4-211ENST00000518842 NEUROD1Q13562 356 aa12.89□□□□□ -0.35
LAMA4-211ENST00000518842 NBPF8Q3BBV2 869 aa12.89□□□□□ -0.35
LAMA4-211ENST00000518842 LMOD2Q6P5Q4 547 aa12.89□□□□□ -0.35
LAMA4-211ENST00000518842 GLI3P10071 1580 aa12.89□□□□□ -0.35
LAMA4-211ENST00000518842 ACEP12821 1306 aa12.88□□□□□ -0.35
LAMA4-211ENST00000518842 FAM83GA6ND36 823 aa12.88□□□□□ -0.35
LAMA4-211ENST00000518842 GSE1Q14687 1217 aa12.88□□□□□ -0.35
LAMA4-211ENST00000518842 VPS72Q15906 364 aa12.88□□□□□ -0.35
LAMA4-211ENST00000518842 TMEM121BQ9BXQ6 578 aaPredicted RBP12.88□□□□□ -0.35
LAMA4-211ENST00000518842 ROCK2O75116 1388 aaKnown RBP12.87□□□□□ -0.35
LAMA4-211ENST00000518842 TRIM26Q12899 539 aaPredicted RBP12.87□□□□□ -0.35
LAMA4-211ENST00000518842 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.87□□□□□ -0.35
LAMA4-211ENST00000518842 ITSN1Q15811 1721 aa12.87□□□□□ -0.35
LAMA4-211ENST00000518842 ATAD2Q6PL18 1390 aa12.86□□□□□ -0.35
LAMA4-211ENST00000518842 CRYBG1Q9Y4K1 1723 aa12.86□□□□□ -0.35
LAMA4-211ENST00000518842 HAP1P54257 671 aaPredicted RBP12.86□□□□□ -0.35
LAMA4-211ENST00000518842 ZNF467Q7Z7K2 595 aaPredicted RBP12.86□□□□□ -0.35
LAMA4-211ENST00000518842 CABP2Q9NPB3 220 aa12.86□□□□□ -0.35
LAMA4-211ENST00000518842 PCDHB8Q9UN66 801 aa12.86□□□□□ -0.35
LAMA4-211ENST00000518842 ONECUT3O60422 494 aaPredicted RBP12.85□□□□□ -0.35
LAMA4-211ENST00000518842 PPIP5K1Q6PFW1 1433 aa12.85□□□□□ -0.35
LAMA4-211ENST00000518842 USP19O94966 1318 aa12.85□□□□□ -0.35
LAMA4-211ENST00000518842 NWD2Q9ULI1 1742 aa12.85□□□□□ -0.35
LAMA4-211ENST00000518842 BRD4O60885 1362 aaPredicted RBP12.84□□□□□ -0.35
LAMA4-211ENST00000518842 SRPK2P78362 688 aaKnown RBP12.84□□□□□ -0.35
LAMA4-211ENST00000518842 SSH2Q76I76 1423 aa12.84□□□□□ -0.35
LAMA4-211ENST00000518842 PLCH1Q4KWH8 1693 aa12.83□□□□□ -0.35
LAMA4-211ENST00000518842 QRICH2Q9H0J4 1663 aa12.83□□□□□ -0.35
LAMA4-211ENST00000518842 SBNO2Q9Y2G9 1366 aa12.83□□□□□ -0.36
LAMA4-211ENST00000518842 NRAPQ86VF7 1730 aa12.82□□□□□ -0.36
LAMA4-211ENST00000518842 BTG4Q9NY30 223 aa12.82□□□□□ -0.36
LAMA4-211ENST00000518842 EVC2Q86UK5 1308 aa12.82□□□□□ -0.36
LAMA4-211ENST00000518842 KIAA0232Q92628 1395 aa12.81□□□□□ -0.36
LAMA4-211ENST00000518842 COL14A1Q05707 1796 aaKnown RBP12.81□□□□□ -0.36
LAMA4-211ENST00000518842 USP6P35125 1406 aa12.81□□□□□ -0.36
LAMA4-211ENST00000518842 KLHL34Q8N239 644 aa12.81□□□□□ -0.36
LAMA4-211ENST00000518842 CABP1Q9NZU7 370 aa12.81□□□□□ -0.36
LAMA4-211ENST00000518842 CPDO75976 1380 aa12.81□□□□□ -0.36
LAMA4-211ENST00000518842 TONSLQ96HA7 1378 aa12.81□□□□□ -0.36
LAMA4-211ENST00000518842 SEPT12Q8IYM1 358 aa12.8□□□□□ -0.36
LAMA4-211ENST00000518842 PRDM11Q9NQV5 511 aa12.8□□□□□ -0.36
LAMA4-211ENST00000518842 NRKQ7Z2Y5 1582 aa12.8□□□□□ -0.36
LAMA4-211ENST00000518842 SPATA31A5Q5VU36 1347 aa12.8□□□□□ -0.36
LAMA4-211ENST00000518842 SPATA31A7Q8IWB4 1347 aa12.8□□□□□ -0.36
LAMA4-211ENST00000518842 PHRF1Q9P1Y6 1649 aaKnown RBP12.8□□□□□ -0.36
LAMA4-211ENST00000518842 EP400Q96L91 3159 aa12.79□□□□□ -0.36
LAMA4-211ENST00000518842 CHRM1P11229 460 aaPredicted RBP12.79□□□□□ -0.36
LAMA4-211ENST00000518842 GOLGA2Q08379 1002 aa12.79□□□□□ -0.36
LAMA4-211ENST00000518842 NUTM2GQ5VZR2 741 aa12.79□□□□□ -0.36
LAMA4-211ENST00000518842 VASPP50552 380 aaPredicted RBP12.78□□□□□ -0.36
LAMA4-211ENST00000518842 ABTB2Q8N961 1025 aa12.78□□□□□ -0.36
LAMA4-211ENST00000518842 CARD11Q9BXL7 1154 aa12.78□□□□□ -0.36
LAMA4-211ENST00000518842 CPSF1Q10570 1443 aaKnown RBP12.78□□□□□ -0.36
LAMA4-211ENST00000518842 MKRN3Q13064 507 aaKnown RBP12.77□□□□□ -0.37
LAMA4-211ENST00000518842 CHRNA2Q15822 529 aa12.77□□□□□ -0.37
LAMA4-211ENST00000518842 CCDC125Q86Z20 511 aa12.77□□□□□ -0.37
LAMA4-211ENST00000518842 L3MBTL3Q96JM7 780 aaPredicted RBP12.77□□□□□ -0.37
LAMA4-211ENST00000518842 SLIT3O75094 1523 aa12.77□□□□□ -0.37
LAMA4-211ENST00000518842 GCP02774 474 aa12.76□□□□□ -0.37
LAMA4-211ENST00000518842 ZC3H6P61129 1189 aaKnown RBP12.76□□□□□ -0.37
LAMA4-211ENST00000518842 NLRP13Q86W25 1043 aa12.76□□□□□ -0.37
LAMA4-211ENST00000518842 CCDC9Q9Y3X0 531 aaKnown RBP12.76□□□□□ -0.37
LAMA4-211ENST00000518842 BLMP54132 1417 aaPredicted RBP12.75□□□□□ -0.37
LAMA4-211ENST00000518842 FAM98CQ17RN3 349 aaKnown RBP12.75□□□□□ -0.37
LAMA4-211ENST00000518842 SPATA31A1Q5TZJ5 1347 aa12.75□□□□□ -0.37
LAMA4-211ENST00000518842 C3orf67Q6ZVT6 689 aa12.75□□□□□ -0.37
LAMA4-211ENST00000518842 TTC21BQ7Z4L5 1316 aa12.75□□□□□ -0.37
LAMA4-211ENST00000518842 PDCD7Q8N8D1 485 aaKnown RBP12.75□□□□□ -0.37
LAMA4-211ENST00000518842 LMO7Q8WWI1 1683 aa12.75□□□□□ -0.37
LAMA4-211ENST00000518842 THSD7AQ9UPZ6 1657 aa12.74□□□□□ -0.37
LAMA4-211ENST00000518842 CAMTA1Q9Y6Y1 1673 aa12.74□□□□□ -0.37
LAMA4-211ENST00000518842 KRT27Q7Z3Y8 459 aa12.74□□□□□ -0.37
LAMA4-211ENST00000518842 CD163L1Q9NR16 1453 aa12.73□□□□□ -0.37
LAMA4-211ENST00000518842 PUS7Q96PZ0 661 aaKnown RBP12.73□□□□□ -0.37
LAMA4-211ENST00000518842 TESK2Q96S53 571 aa12.73□□□□□ -0.37
LAMA4-211ENST00000518842 PIK3C2AO00443 1686 aa12.73□□□□□ -0.37
LAMA4-211ENST00000518842 AATKQ6ZMQ8 1374 aa12.72□□□□□ -0.37
LAMA4-211ENST00000518842 TTC21AQ8NDW8 1320 aa12.72□□□□□ -0.37
LAMA4-211ENST00000518842 NLRP6P59044 892 aa12.72□□□□□ -0.37
LAMA4-211ENST00000518842 BRWD3Q6RI45 1802 aa12.72□□□□□ -0.37
LAMA4-211ENST00000518842 BARGINQ6ZT62 677 aa12.71□□□□□ -0.37
LAMA4-211ENST00000518842 COL5A2P05997 1499 aaPredicted RBP12.71□□□□□ -0.38
LAMA4-211ENST00000518842 USP31Q70CQ4 1352 aa12.7□□□□□ -0.38
LAMA4-211ENST00000518842 LARP1Q6PKG0 1096 aaKnown RBP12.7□□□□□ -0.38
LAMA4-211ENST00000518842 STRN4Q9NRL3 753 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms