RNA–Protein interactions for RNA: ENST00000518587.1

NPM1-205, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 670 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-205ENST00000518587 TTLL12Q14166 644 aaPredicted RBP9.78□□□□□ -0.84
NPM1-205ENST00000518587 PARP9Q8IXQ6 854 aa9.78□□□□□ -0.84
NPM1-205ENST00000518587 HPS5Q9UPZ3 1129 aa9.78□□□□□ -0.84
NPM1-205ENST00000518587 MYOM3Q5VTT5 1437 aa9.78□□□□□ -0.84
NPM1-205ENST00000518587 CPS1P31327 1500 aa9.77□□□□□ -0.84
NPM1-205ENST00000518587 RNF40O75150 1001 aa9.77□□□□□ -0.85
NPM1-205ENST00000518587 SLC10A3P09131 477 aa9.77□□□□□ -0.85
NPM1-205ENST00000518587 THEMISQ8N1K5 641 aaPredicted RBP9.77□□□□□ -0.85
NPM1-205ENST00000518587 TSR3Q9UJK0 312 aaKnown RBP9.77□□□□□ -0.85
NPM1-205ENST00000518587 DNMT1P26358 1616 aaKnown RBP9.76□□□□□ -0.85
NPM1-205ENST00000518587 RNF17Q9BXT8 1623 aaKnown RBP9.76□□□□□ -0.85
NPM1-205ENST00000518587 DDX11L8A8MPP1 907 aa9.76□□□□□ -0.85
NPM1-205ENST00000518587 PTPN5P54829 565 aa9.76□□□□□ -0.85
NPM1-205ENST00000518587 WBP1LQ9NX94 342 aa9.76□□□□□ -0.85
NPM1-205ENST00000518587 ZNF644Q9H582 1327 aaPredicted RBP9.76□□□□□ -0.85
NPM1-205ENST00000518587 POLR1AO95602 1720 aaPredicted RBP9.76□□□□□ -0.85
NPM1-205ENST00000518587 SHANK2Q9UPX8 1470 aa9.75□□□□□ -0.85
NPM1-205ENST00000518587 SLC4A3P48751 1232 aa9.75□□□□□ -0.85
NPM1-205ENST00000518587 PPP4CP60510 307 aa9.75□□□□□ -0.85
NPM1-205ENST00000518587 GIGYF2Q6Y7W6 1299 aaKnown RBP9.75□□□□□ -0.85
NPM1-205ENST00000518587 ANKLE2Q86XL3 938 aa9.75□□□□□ -0.85
NPM1-205ENST00000518587 FAM217BQ9NTX9 383 aaPredicted RBP9.75□□□□□ -0.85
NPM1-205ENST00000518587 DEPDC5O75140 1603 aa9.74□□□□□ -0.85
NPM1-205ENST00000518587 DUOX2Q9NRD8 1548 aa9.74□□□□□ -0.85
NPM1-205ENST00000518587 SSTR3P32745 418 aaPredicted RBP9.74□□□□□ -0.85
NPM1-205ENST00000518587 SULF1Q8IWU6 871 aa9.74□□□□□ -0.85
NPM1-205ENST00000518587 UGGT1Q9NYU2 1555 aa9.73□□□□□ -0.85
NPM1-205ENST00000518587 GPBP1L1Q9HC44 474 aaPredicted RBP9.73□□□□□ -0.85
NPM1-205ENST00000518587 ERBINQ96RT1 1412 aa9.73□□□□□ -0.85
NPM1-205ENST00000518587 MED14O60244 1454 aa9.72□□□□□ -0.85
NPM1-205ENST00000518587 SPATA31D1Q6ZQQ2 1576 aa9.72□□□□□ -0.85
NPM1-205ENST00000518587 TOM1O60784 492 aa9.72□□□□□ -0.85
NPM1-205ENST00000518587 RDH13Q8NBN7 331 aa9.72□□□□□ -0.85
NPM1-205ENST00000518587 HCSTQ9UBK5 93 aa9.72□□□□□ -0.85
NPM1-205ENST00000518587 MS4A1P11836 297 aa9.71□□□□□ -0.86
NPM1-205ENST00000518587 CD46P15529 392 aa9.71□□□□□ -0.86
NPM1-205ENST00000518587 BRPF1P55201 1214 aaPredicted RBP9.71□□□□□ -0.86
NPM1-205ENST00000518587 KANK1Q14678 1352 aa9.71□□□□□ -0.86
NPM1-205ENST00000518587 DISP3Q9P2K9 1392 aa9.71□□□□□ -0.86
NPM1-205ENST00000518587 ARHGAP31Q2M1Z3 1444 aa9.71□□□□□ -0.86
NPM1-205ENST00000518587 ABCC3O15438 1527 aa9.71□□□□□ -0.86
NPM1-205ENST00000518587 UBAP1LF5GYI3 381 aa9.7□□□□□ -0.86
NPM1-205ENST00000518587 HOMEZQ8IX15 550 aa9.7□□□□□ -0.86
NPM1-205ENST00000518587 NECTIN2Q92692 538 aa9.7□□□□□ -0.86
NPM1-205ENST00000518587 KDM4CQ9H3R0 1056 aa9.7□□□□□ -0.86
NPM1-205ENST00000518587 PLSCR2Q9NRY7 297 aa9.7□□□□□ -0.86
NPM1-205ENST00000518587 ZNF335Q9H4Z2 1342 aaPredicted RBP9.7□□□□□ -0.86
NPM1-205ENST00000518587 NPHP4O75161 1426 aaPredicted RBP9.69□□□□□ -0.86
NPM1-205ENST00000518587 CFHP08603 1231 aa9.69□□□□□ -0.86
NPM1-205ENST00000518587 APLP1P51693 650 aa9.69□□□□□ -0.86
NPM1-205ENST00000518587 PRDM15P57071 1507 aaPredicted RBP9.69□□□□□ -0.86
NPM1-205ENST00000518587 NEUROD2Q15784 382 aa9.69□□□□□ -0.86
NPM1-205ENST00000518587 SYNMO15061 1565 aa9.68□□□□□ -0.86
NPM1-205ENST00000518587 NEURL4Q96JN8 1562 aa9.68□□□□□ -0.86
NPM1-205ENST00000518587 ERVK-7P63135 1459 aa9.68□□□□□ -0.86
NPM1-205ENST00000518587 ANKRD30AQ9BXX3 1397 aa9.68□□□□□ -0.86
NPM1-205ENST00000518587 GCGRP47871 477 aa9.68□□□□□ -0.86
NPM1-205ENST00000518587 NYAP1Q6ZVC0 841 aa9.68□□□□□ -0.86
NPM1-205ENST00000518587 CROCC2H7BZ55 1655 aa9.67□□□□□ -0.86
NPM1-205ENST00000518587 KDM5AP29375 1690 aaKnown RBP9.67□□□□□ -0.86
NPM1-205ENST00000518587 KIF15Q9NS87 1388 aa9.67□□□□□ -0.86
NPM1-205ENST00000518587 IQGAP1P46940 1657 aa9.67□□□□□ -0.86
NPM1-205ENST00000518587 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.66□□□□□ -0.866e-10■■■□□ 18.9
NPM1-205ENST00000518587 BEGAINQ9BUH8 593 aa9.66□□□□□ -0.86
NPM1-205ENST00000518587 EID1Q9Y6B2 187 aa9.66□□□□□ -0.86
NPM1-205ENST00000518587 PTPN23Q9H3S7 1636 aa9.66□□□□□ -0.86
NPM1-205ENST00000518587 SOCS7O14512 581 aa9.65□□□□□ -0.86
NPM1-205ENST00000518587 KMT5BQ4FZB7 885 aa9.65□□□□□ -0.86
NPM1-205ENST00000518587 FBXO31Q5XUX0 539 aaPredicted RBP9.65□□□□□ -0.86
NPM1-205ENST00000518587 SLIT1O75093 1534 aa9.65□□□□□ -0.86
NPM1-205ENST00000518587 LMTK2Q8IWU2 1503 aa9.65□□□□□ -0.86
NPM1-205ENST00000518587 SCAF11Q99590 1463 aaKnown RBP9.65□□□□□ -0.87
NPM1-205ENST00000518587 DAPK1P53355 1430 aa9.65□□□□□ -0.87
NPM1-205ENST00000518587 FGD6Q6ZV73 1430 aa9.65□□□□□ -0.87
NPM1-205ENST00000518587 MROH1Q8NDA8 1641 aa9.64□□□□□ -0.87
NPM1-205ENST00000518587 ACTN4O43707 911 aaKnown RBP9.64□□□□□ -0.87
NPM1-205ENST00000518587 PRR14Q9BWN1 585 aa9.64□□□□□ -0.87
NPM1-205ENST00000518587 ABCC5O15440 1437 aa9.64□□□□□ -0.87
NPM1-205ENST00000518587 VWDEQ8N2E2 1590 aa9.63□□□□□ -0.87
NPM1-205ENST00000518587 ERICH6Q7L0X2 663 aa9.63□□□□□ -0.87
NPM1-205ENST00000518587 FAM117AQ9C073 453 aa9.63□□□□□ -0.87
NPM1-205ENST00000518587 RPRD2Q5VT52 1461 aaKnown RBP9.63□□□□□ -0.87
NPM1-205ENST00000518587 UBR1Q8IWV7 1749 aa9.62□□□□□ -0.87
NPM1-205ENST00000518587 ADGRL2O95490 1459 aa9.62□□□□□ -0.87
NPM1-205ENST00000518587 ARHGAP23Q9P227 1491 aa9.62□□□□□ -0.87
NPM1-205ENST00000518587 KDM4AO75164 1064 aa9.62□□□□□ -0.87
NPM1-205ENST00000518587 KANK4Q5T7N3 995 aaPredicted RBP9.62□□□□□ -0.87
NPM1-205ENST00000518587 SLC52A1Q9NWF4 448 aa9.62□□□□□ -0.87
NPM1-205ENST00000518587 CEP152O94986 1710 aa9.62□□□□□ -0.87
NPM1-205ENST00000518587 FUT2Q10981 343 aa9.61□□□□□ -0.87
NPM1-205ENST00000518587 NUTM1Q86Y26 1132 aa9.6□□□□□ -0.87
NPM1-205ENST00000518587 SPIRE2Q8WWL2 714 aa9.6□□□□□ -0.87
NPM1-205ENST00000518587 LOC105371045A0A1W2PR82 267 aa9.59□□□□□ -0.87
NPM1-205ENST00000518587 PLEKHG3A1L390 1219 aa9.59□□□□□ -0.87
NPM1-205ENST00000518587 ATP6V1AP38606 617 aa9.59□□□□□ -0.87
NPM1-205ENST00000518587 PUS10Q3MIT2 529 aaKnown RBP9.59□□□□□ -0.87
NPM1-205ENST00000518587 TXNDC2Q86VQ3 553 aa9.59□□□□□ -0.87
NPM1-205ENST00000518587 RRP7BPQ9NSQ0 103 aa9.59□□□□□ -0.87
NPM1-205ENST00000518587 PCDHB3Q9Y5E6 796 aa9.59□□□□□ -0.87
NPM1-205ENST00000518587 GTF3C3Q9Y5Q9 886 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms