RNA–Protein interactions for RNA: ENST00000518043.5

CPS1-210, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 2

Gene CPS1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-210ENST00000518043 SPHKAPQ2M3C7 1700 aa10.07□□□□□ -0.8
CPS1-210ENST00000518043 FAM98CQ17RN3 349 aaKnown RBP10.07□□□□□ -0.8
CPS1-210ENST00000518043 LAPTM4BQ86VI4 370 aa10.07□□□□□ -0.8
CPS1-210ENST00000518043 CDAN1Q8IWY9 1227 aa10.07□□□□□ -0.8
CPS1-210ENST00000518043 TMEM134Q9H6X4 195 aa10.07□□□□□ -0.8
CPS1-210ENST00000518043 MRPL50Q8N5N7 158 aaKnown RBP10.06□□□□□ -0.8
CPS1-210ENST00000518043 SIN3AQ96ST3 1273 aa10.06□□□□□ -0.8
CPS1-210ENST00000518043 DAXXQ9UER7 740 aaPredicted RBP10.06□□□□□ -0.8
CPS1-210ENST00000518043 MYT1LQ9UL68 1186 aa10.06□□□□□ -0.8
CPS1-210ENST00000518043 TRPM2O94759 1503 aa10.06□□□□□ -0.8
CPS1-210ENST00000518043 PTPRTO14522 1441 aa10.06□□□□□ -0.8
CPS1-210ENST00000518043 RPRD2Q5VT52 1461 aaKnown RBP10.05□□□□□ -0.8
CPS1-210ENST00000518043 NPATQ14207 1427 aa10.05□□□□□ -0.8
CPS1-210ENST00000518043 CLTCQ00610 1675 aaKnown RBP10.05□□□□□ -0.8
CPS1-210ENST00000518043 CLTCL1P53675 1640 aa10.04□□□□□ -0.8
CPS1-210ENST00000518043 SSTR3P32745 418 aaPredicted RBP10.04□□□□□ -0.8
CPS1-210ENST00000518043 FAM217BQ9NTX9 383 aaPredicted RBP10.04□□□□□ -0.8
CPS1-210ENST00000518043 SYNMO15061 1565 aa10.03□□□□□ -0.8
CPS1-210ENST00000518043 MS4A1P11836 297 aa10.03□□□□□ -0.8
CPS1-210ENST00000518043 ARHGAP31Q2M1Z3 1444 aa10.03□□□□□ -0.8
CPS1-210ENST00000518043 STAC3Q96MF2 364 aa10.03□□□□□ -0.8
CPS1-210ENST00000518043 PIK3C2BO00750 1634 aa10.03□□□□□ -0.8
CPS1-210ENST00000518043 PREX1Q8TCU6 1659 aa10.02□□□□□ -0.8
CPS1-210ENST00000518043 UGGT1Q9NYU2 1555 aa10.02□□□□□ -0.81
CPS1-210ENST00000518043 SWT1Q5T5J6 900 aaKnown RBP10.02□□□□□ -0.81
CPS1-210ENST00000518043 ZFRQ96KR1 1074 aaKnown RBP10.02□□□□□ -0.81
CPS1-210ENST00000518043 FAM117AQ9C073 453 aa10.02□□□□□ -0.81
CPS1-210ENST00000518043 KANK1Q14678 1352 aa10.01□□□□□ -0.81
CPS1-210ENST00000518043 NOS1P29475 1434 aa10.01□□□□□ -0.81
CPS1-210ENST00000518043 HDGFP51858 240 aaKnown RBP10.01□□□□□ -0.81
CPS1-210ENST00000518043 MROH2AA6NES4 1674 aa10.01□□□□□ -0.81
CPS1-210ENST00000518043 CFAP65Q6ZU64 1925 aaKnown RBP10.01□□□□□ -0.81
CPS1-210ENST00000518043 ZEB1P37275 1124 aaPredicted RBP10□□□□□ -0.81
CPS1-210ENST00000518043 TMEM132AQ24JP5 1023 aa10□□□□□ -0.81
CPS1-210ENST00000518043 GGT6Q6P531 493 aa10□□□□□ -0.81
CPS1-210ENST00000518043 SAMD7Q7Z3H4 446 aa10□□□□□ -0.81
CPS1-210ENST00000518043 IL27Q8NEV9 243 aa10□□□□□ -0.81
CPS1-210ENST00000518043 FER1L4A9Z1Z3 1794 aa10□□□□□ -0.81
CPS1-210ENST00000518043 ADAMTSL3P82987 1691 aa9.99□□□□□ -0.81
CPS1-210ENST00000518043 DDX11L8A8MPP1 907 aa9.99□□□□□ -0.81
CPS1-210ENST00000518043 SULF1Q8IWU6 871 aa9.99□□□□□ -0.81
CPS1-210ENST00000518043 DDRGK1Q96HY6 314 aa9.99□□□□□ -0.81
CPS1-210ENST00000518043 SPATA31D1Q6ZQQ2 1576 aa9.99□□□□□ -0.81
CPS1-210ENST00000518043 NEURL4Q96JN8 1562 aa9.99□□□□□ -0.81
CPS1-210ENST00000518043 SPATA31E1Q6ZUB1 1445 aa9.99□□□□□ -0.81
CPS1-210ENST00000518043 GOLGA8CPA6NN73 597 aa9.98□□□□□ -0.81
CPS1-210ENST00000518043 CNTLNQ9NXG0 1405 aa9.98□□□□□ -0.81
CPS1-210ENST00000518043 ERVK-7P63135 1459 aa9.98□□□□□ -0.81
CPS1-210ENST00000518043 ADGRB3O60242 1522 aa9.97□□□□□ -0.81
CPS1-210ENST00000518043 MADDQ8WXG6 1647 aa9.97□□□□□ -0.81
CPS1-210ENST00000518043 IFT172Q9UG01 1749 aa9.97□□□□□ -0.81
CPS1-210ENST00000518043 PLEKHG3A1L390 1219 aa9.97□□□□□ -0.81
CPS1-210ENST00000518043 BEGAINQ9BUH8 593 aa9.97□□□□□ -0.81
CPS1-210ENST00000518043 C3P01024 1663 aa9.96□□□□□ -0.81
CPS1-210ENST00000518043 CD46P15529 392 aa9.96□□□□□ -0.82
CPS1-210ENST00000518043 SLC4A3P48751 1232 aa9.96□□□□□ -0.82
CPS1-210ENST00000518043 NEUROD1Q13562 356 aa9.96□□□□□ -0.82
CPS1-210ENST00000518043 WASHC2CQ9Y4E1 1318 aa9.96□□□□□ -0.82
CPS1-210ENST00000518043 CCDC144AA2RUR9 1427 aa9.96□□□□□ -0.82
CPS1-210ENST00000518043 MYO5BQ9ULV0 1848 aa9.96□□□□□ -0.82
CPS1-210ENST00000518043 SLF2Q8IX21 1173 aa9.95□□□□□ -0.82
CPS1-210ENST00000518043 RDH13Q8NBN7 331 aa9.95□□□□□ -0.82
CPS1-210ENST00000518043 LRCH3Q96II8 777 aa9.95□□□□□ -0.82
CPS1-210ENST00000518043 KIF1BO60333 1816 aa9.95□□□□□ -0.82
CPS1-210ENST00000518043 RIMS1Q86UR5 1692 aaKnown RBP9.94□□□□□ -0.82
CPS1-210ENST00000518043 RNF40O75150 1001 aa9.94□□□□□ -0.82
CPS1-210ENST00000518043 MLECQ14165 292 aa9.94□□□□□ -0.82
CPS1-210ENST00000518043 ANKK1Q8NFD2 765 aa9.94□□□□□ -0.82
CPS1-210ENST00000518043 WNT2BQ93097 391 aa9.94□□□□□ -0.82
CPS1-210ENST00000518043 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.94□□□□□ -0.82
CPS1-210ENST00000518043 TIMELESSQ9UNS1 1208 aa9.94□□□□□ -0.82
CPS1-210ENST00000518043 TMEM131LA2VDJ0 1609 aa9.93□□□□□ -0.82
CPS1-210ENST00000518043 TONSLQ96HA7 1378 aa9.93□□□□□ -0.82
CPS1-210ENST00000518043 SLC10A3P09131 477 aa9.93□□□□□ -0.82
CPS1-210ENST00000518043 L3MBTL2Q969R5 705 aa9.93□□□□□ -0.82
CPS1-210ENST00000518043 PPLO60437 1756 aa9.93□□□□□ -0.82
CPS1-210ENST00000518043 PPP1R15AO75807 674 aaPredicted RBP9.92□□□□□ -0.82
CPS1-210ENST00000518043 PCDH10Q9P2E7 1040 aa9.92□□□□□ -0.82
CPS1-210ENST00000518043 UHRF1BP1Q6BDS2 1440 aa9.91□□□□□ -0.82
CPS1-210ENST00000518043 ZMYM3Q14202 1370 aa9.91□□□□□ -0.82
CPS1-210ENST00000518043 ARID4BQ4LE39 1312 aaPredicted RBP9.91□□□□□ -0.82
CPS1-210ENST00000518043 SOWAHBA6NEL2 793 aa9.91□□□□□ -0.82
CPS1-210ENST00000518043 FBXO31Q5XUX0 539 aaPredicted RBP9.91□□□□□ -0.82
CPS1-210ENST00000518043 BCAMP50895 628 aa9.9□□□□□ -0.82
CPS1-210ENST00000518043 NEXMIFQ5QGS0 1516 aa9.9□□□□□ -0.82
CPS1-210ENST00000518043 GCGRP47871 477 aa9.89□□□□□ -0.83
CPS1-210ENST00000518043 NBPF8Q3BBV2 869 aa9.89□□□□□ -0.83
CPS1-210ENST00000518043 MYOM2P54296 1465 aa9.89□□□□□ -0.83
CPS1-210ENST00000518043 NRXN1Q9ULB1 1477 aa9.89□□□□□ -0.83
CPS1-210ENST00000518043 KDM5AP29375 1690 aaKnown RBP9.89□□□□□ -0.83
CPS1-210ENST00000518043 TRPM1Q7Z4N2 1603 aa9.89□□□□□ -0.83
CPS1-210ENST00000518043 MYO3AQ8NEV4 1616 aa9.89□□□□□ -0.83
CPS1-210ENST00000518043 UBR1Q8IWV7 1749 aa9.88□□□□□ -0.83
CPS1-210ENST00000518043 NECTIN2Q92692 538 aa9.88□□□□□ -0.83
CPS1-210ENST00000518043 TBC1D2Q9BYX2 928 aa9.88□□□□□ -0.83
CPS1-210ENST00000518043 HPS5Q9UPZ3 1129 aa9.88□□□□□ -0.83
CPS1-210ENST00000518043 PRAG1Q86YV5 1406 aa9.88□□□□□ -0.83
CPS1-210ENST00000518043 A2ML1A8K2U0 1454 aa9.87□□□□□ -0.83
CPS1-210ENST00000518043 RALGAPBQ86X10 1494 aa9.87□□□□□ -0.83
CPS1-210ENST00000518043 CFHP08603 1231 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms