RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 EMID1Q96A84 441 aaPredicted RBP5.86□□□□□ -1.47
SKP1-203ENST00000517625 CDK15Q96Q40 435 aa5.86□□□□□ -1.47
SKP1-203ENST00000517625 UCN2Q96RP3 112 aa5.86□□□□□ -1.47
SKP1-203ENST00000517625 RNF135Q8IUD6 432 aa5.85□□□□□ -1.47
SKP1-203ENST00000517625 MAFBQ9Y5Q3 323 aaPredicted RBP5.85□□□□□ -1.47
SKP1-203ENST00000517625 PALM3A6NDB9 673 aaPredicted RBP5.84□□□□□ -1.47
SKP1-203ENST00000517625 CFAP70Q5T0N1 1121 aa5.84□□□□□ -1.47
SKP1-203ENST00000517625 ZNF697Q5TEC3 545 aa5.84□□□□□ -1.47
SKP1-203ENST00000517625 PHTF2Q8N3S3 785 aa5.84□□□□□ -1.47
SKP1-203ENST00000517625 PBXIP1Q96AQ6 731 aa5.84□□□□□ -1.47
SKP1-203ENST00000517625 DHX9Q08211 1270 aaKnown RBP5.83□□□□□ -1.48
SKP1-203ENST00000517625 VASH1Q7L8A9 365 aaPredicted RBP5.83□□□□□ -1.48
SKP1-203ENST00000517625 HOMEZQ8IX15 550 aa5.83□□□□□ -1.48
SKP1-203ENST00000517625 SIRT1Q96EB6 747 aa5.83□□□□□ -1.48
SKP1-203ENST00000517625 KCTD15Q96SI1 283 aaPredicted RBP5.83□□□□□ -1.48
SKP1-203ENST00000517625 PRKD2Q9BZL6 878 aa5.83□□□□□ -1.48
SKP1-203ENST00000517625 USP17L5A8MUK1 530 aa5.82□□□□□ -1.48
SKP1-203ENST00000517625 SIAH2O43255 324 aa5.82□□□□□ -1.48
SKP1-203ENST00000517625 ADH1CP00326 375 aa5.82□□□□□ -1.48
SKP1-203ENST00000517625 SKIP12755 728 aa5.82□□□□□ -1.48
SKP1-203ENST00000517625 PRR20EP86478 221 aa5.82□□□□□ -1.48
SKP1-203ENST00000517625 PRR20CP86479 221 aa5.82□□□□□ -1.48
SKP1-203ENST00000517625 PRR20DP86480 221 aa5.82□□□□□ -1.48
SKP1-203ENST00000517625 PRR20BP86481 221 aa5.82□□□□□ -1.48
SKP1-203ENST00000517625 PRR20AP86496 221 aa5.82□□□□□ -1.48
SKP1-203ENST00000517625 PDE4CQ08493 712 aa5.82□□□□□ -1.48
SKP1-203ENST00000517625 NR5A1Q13285 461 aa5.82□□□□□ -1.48
SKP1-203ENST00000517625 TBC1D9Q6ZT07 1266 aa5.82□□□□□ -1.48
SKP1-203ENST00000517625 PLPP7Q8NBV4 271 aa5.82□□□□□ -1.48
SKP1-203ENST00000517625 ARID3AQ99856 593 aa5.82□□□□□ -1.48
SKP1-203ENST00000517625 TFIP11Q9UBB9 837 aaKnown RBP5.82□□□□□ -1.48
SKP1-203ENST00000517625 USP17L3A6NCW0 530 aa5.81□□□□□ -1.48
SKP1-203ENST00000517625 USP17L4A6NCW7 530 aa5.81□□□□□ -1.48
SKP1-203ENST00000517625 EML3Q32P44 896 aa5.81□□□□□ -1.48
SKP1-203ENST00000517625 USP17L2Q6R6M4 530 aa5.81□□□□□ -1.48
SKP1-203ENST00000517625 USP17L1Q7RTZ2 530 aa5.81□□□□□ -1.48
SKP1-203ENST00000517625 MRGPRX2Q96LB1 330 aa5.81□□□□□ -1.48
SKP1-203ENST00000517625 DOLKQ9UPQ8 538 aa5.81□□□□□ -1.48
SKP1-203ENST00000517625 ATP5J2-PTCD1G3V325 749 aa5.8□□□□□ -1.48
SKP1-203ENST00000517625 PIK3CDO00329 1044 aa5.8□□□□□ -1.48
SKP1-203ENST00000517625 GIGYF1O75420 1035 aaPredicted RBP5.8□□□□□ -1.48
SKP1-203ENST00000517625 LMOD1P29536 600 aaPredicted RBP5.8□□□□□ -1.48
SKP1-203ENST00000517625 INTS6LQ5JSJ4 861 aaKnown RBP5.8□□□□□ -1.48
SKP1-203ENST00000517625 TRAF7Q6Q0C0 670 aa5.8□□□□□ -1.48
SKP1-203ENST00000517625 TRIM50Q86XT4 487 aa5.8□□□□□ -1.48
SKP1-203ENST00000517625 SNIP1Q8TAD8 396 aaKnown RBP5.8□□□□□ -1.48
SKP1-203ENST00000517625 PKD2L1Q9P0L9 805 aa5.8□□□□□ -1.48
SKP1-203ENST00000517625 FSHRP23945 695 aa5.79□□□□□ -1.48
SKP1-203ENST00000517625 ATP1A2P50993 1020 aa5.79□□□□□ -1.48
SKP1-203ENST00000517625 SRPK2P78362 688 aaKnown RBP5.79□□□□□ -1.48
SKP1-203ENST00000517625 USP4Q13107 963 aa5.79□□□□□ -1.48
SKP1-203ENST00000517625 NOD1Q9Y239 953 aa5.79□□□□□ -1.48
SKP1-203ENST00000517625 TLL2Q9Y6L7 1015 aa5.79□□□□□ -1.48
SKP1-203ENST00000517625 ACIN1Q9UKV3 1341 aaKnown RBP5.78□□□□□ -1.48
SKP1-203ENST00000517625 FAM196BA6NMK8 535 aa5.78□□□□□ -1.48
SKP1-203ENST00000517625 GDF9O60383 454 aa5.78□□□□□ -1.48
SKP1-203ENST00000517625 ATG7O95352 703 aa5.78□□□□□ -1.48
SKP1-203ENST00000517625 MYCP01106 439 aaPredicted RBP5.78□□□□□ -1.48
SKP1-203ENST00000517625 GRM5P41594 1212 aa5.78□□□□□ -1.48
SKP1-203ENST00000517625 NCOA4Q13772 614 aa5.78□□□□□ -1.48
SKP1-203ENST00000517625 ELOAQ14241 798 aaKnown RBP5.78□□□□□ -1.48
SKP1-203ENST00000517625 ARID5BQ14865 1188 aa5.78□□□□□ -1.48
SKP1-203ENST00000517625 CCDC116Q8IYX3 515 aa5.78□□□□□ -1.48
SKP1-203ENST00000517625 CCDC85AQ96PX6 553 aaPredicted RBP5.78□□□□□ -1.48
SKP1-203ENST00000517625 VRTNQ9H8Y1 702 aa5.78□□□□□ -1.48
SKP1-203ENST00000517625 PGPEP1Q9NXJ5 209 aa5.78□□□□□ -1.48
SKP1-203ENST00000517625 PCDHB11Q9Y5F2 797 aa5.78□□□□□ -1.48
SKP1-203ENST00000517625 EMILIN1Q9Y6C2 1016 aa5.78□□□□□ -1.48
SKP1-203ENST00000517625 KANK4Q5T7N3 995 aaPredicted RBP5.77□□□□□ -1.49
SKP1-203ENST00000517625 CYP4X1Q8N118 509 aa5.77□□□□□ -1.49
SKP1-203ENST00000517625 USTQ9Y2C2 406 aa5.77□□□□□ -1.49
SKP1-203ENST00000517625 WASF2Q9Y6W5 498 aa5.77□□□□□ -1.49
SKP1-203ENST00000517625 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.76□□□□□ -1.49
SKP1-203ENST00000517625 ERVH48-1M5A8F1 160 aa5.76□□□□□ -1.49
SKP1-203ENST00000517625 ALDH1A1P00352 501 aa5.76□□□□□ -1.49
SKP1-203ENST00000517625 ERVK-9P63128 1117 aa5.76□□□□□ -1.49
SKP1-203ENST00000517625 FOXC1Q12948 553 aa5.76□□□□□ -1.49
SKP1-203ENST00000517625 CC2D2BQ6DHV5 1058 aa5.76□□□□□ -1.49
SKP1-203ENST00000517625 LARP1Q6PKG0 1096 aaKnown RBP5.76□□□□□ -1.49
SKP1-203ENST00000517625 TOR4AQ9NXH8 423 aa5.76□□□□□ -1.49
SKP1-203ENST00000517625 TTC24A2A3L6 582 aaPredicted RBP5.75□□□□□ -1.49
SKP1-203ENST00000517625 RFX1P22670 979 aa5.75□□□□□ -1.49
SKP1-203ENST00000517625 MYT1Q01538 1121 aa5.75□□□□□ -1.49
SKP1-203ENST00000517625 OXLD1Q5BKU9 147 aa5.75□□□□□ -1.49
SKP1-203ENST00000517625 LARGE2Q8N3Y3 721 aa5.75□□□□□ -1.49
SKP1-203ENST00000517625 ESF1Q9H501 851 aaKnown RBP5.75□□□□□ -1.49
SKP1-203ENST00000517625 MKRN1Q9UHC7 482 aaKnown RBP5.75□□□□□ -1.49
SKP1-203ENST00000517625 USP17L15C9J2P7 530 aa5.74□□□□□ -1.49
SKP1-203ENST00000517625 USP17L10C9JJH3 530 aa5.74□□□□□ -1.49
SKP1-203ENST00000517625 USP17L13C9JLJ4 530 aa5.74□□□□□ -1.49
SKP1-203ENST00000517625 USP17L12C9JPN9 530 aa5.74□□□□□ -1.49
SKP1-203ENST00000517625 USP17L11C9JVI0 530 aa5.74□□□□□ -1.49
SKP1-203ENST00000517625 USP17L21D6R901 530 aa5.74□□□□□ -1.49
SKP1-203ENST00000517625 USP17L18D6R9N7 530 aa5.74□□□□□ -1.49
SKP1-203ENST00000517625 USP17L22D6RA61 530 aa5.74□□□□□ -1.49
SKP1-203ENST00000517625 USP17L17D6RBQ6 530 aa5.74□□□□□ -1.49
SKP1-203ENST00000517625 USP17L19D6RCP7 530 aa5.74□□□□□ -1.49
SKP1-203ENST00000517625 USP17L20D6RJB6 530 aa5.74□□□□□ -1.49
SKP1-203ENST00000517625 CSB-PGBD3P0DP91 1061 aa5.74□□□□□ -1.49
SKP1-203ENST00000517625 USP17L24Q0WX57 530 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms