RNA–Protein interactions for RNA: ENST00000517608.5

UBE2W-203, Transcript of ubiquitin conjugating enzyme E2 W, humanhuman

TSL 1 (best) BASIC

Gene UBE2W, Length 8,426 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2W-203ENST00000517608 PAPPAQ13219 1627 aa4.59□□□□□ -1.67
UBE2W-203ENST00000517608 FBXO31Q5XUX0 539 aaPredicted RBP4.59□□□□□ -1.68
UBE2W-203ENST00000517608 NHSL1Q5SYE7 1610 aa4.58□□□□□ -1.68
UBE2W-203ENST00000517608 WDR81Q562E7 1941 aa4.58□□□□□ -1.68
UBE2W-203ENST00000517608 ABCA3Q99758 1704 aa4.58□□□□□ -1.68
UBE2W-203ENST00000517608 PNNQ9H307 717 aaKnown RBP4.58□□□□□ -1.68
UBE2W-203ENST00000517608 DCCP43146 1447 aa4.58□□□□□ -1.68
UBE2W-203ENST00000517608 SHANK1Q9Y566 2161 aa4.58□□□□□ -1.68
UBE2W-203ENST00000517608 USP19O94966 1318 aa4.58□□□□□ -1.68
UBE2W-203ENST00000517608 INTS1Q8N201 2190 aaKnown RBP4.58□□□□□ -1.68
UBE2W-203ENST00000517608 PKNOX2Q96KN3 472 aa4.58□□□□□ -1.68
UBE2W-203ENST00000517608 SHANK3Q9BYB0 1731 aa4.58□□□□□ -1.68
UBE2W-203ENST00000517608 TCERG1O14776 1098 aaKnown RBP4.58□□□□□ -1.68
UBE2W-203ENST00000517608 NUP205Q92621 2012 aa4.58□□□□□ -1.68
UBE2W-203ENST00000517608 RREB1Q92766 1687 aa4.58□□□□□ -1.68
UBE2W-203ENST00000517608 CRB1P82279 1406 aa4.58□□□□□ -1.68
UBE2W-203ENST00000517608 SUPT16HQ9Y5B9 1047 aaKnown RBP4.57□□□□□ -1.68
UBE2W-203ENST00000517608 BRPF1P55201 1214 aaPredicted RBP4.57□□□□□ -1.68
UBE2W-203ENST00000517608 CKAP5Q14008 2032 aa4.57□□□□□ -1.68
UBE2W-203ENST00000517608 CACNA1GO43497 2377 aa4.57□□□□□ -1.68
UBE2W-203ENST00000517608 TDRD6O60522 2096 aaKnown RBP4.57□□□□□ -1.68
UBE2W-203ENST00000517608 SIPA1L3O60292 1781 aaPredicted RBP4.57□□□□□ -1.68
UBE2W-203ENST00000517608 WNK2Q9Y3S1 2297 aa4.57□□□□□ -1.68
UBE2W-203ENST00000517608 SCN10AQ9Y5Y9 1956 aa4.57□□□□□ -1.68
UBE2W-203ENST00000517608 PARP4Q9UKK3 1724 aaKnown RBP4.57□□□□□ -1.68
UBE2W-203ENST00000517608 USP6P35125 1406 aa4.56□□□□□ -1.68
UBE2W-203ENST00000517608 TSPY4P0CV99 314 aa4.56□□□□□ -1.68
UBE2W-203ENST00000517608 TSPY10P0CW01 314 aa4.56□□□□□ -1.68
UBE2W-203ENST00000517608 CCDC136Q96JN2 1154 aa4.56□□□□□ -1.68
UBE2W-203ENST00000517608 KLHL34Q8N239 644 aa4.56□□□□□ -1.68
UBE2W-203ENST00000517608 SCN9AQ15858 1988 aa4.56□□□□□ -1.68
UBE2W-203ENST00000517608 CCDC27Q2M243 656 aa4.56□□□□□ -1.68
UBE2W-203ENST00000517608 MED12LQ86YW9 2145 aa4.56□□□□□ -1.68
UBE2W-203ENST00000517608 CDK5RAP2Q96SN8 1893 aa4.56□□□□□ -1.68
UBE2W-203ENST00000517608 ZNF407Q9C0G0 2248 aa4.56□□□□□ -1.68
UBE2W-203ENST00000517608 ARID3CA6NKF2 412 aa4.56□□□□□ -1.68
UBE2W-203ENST00000517608 RBM19Q9Y4C8 960 aaKnown RBP4.56□□□□□ -1.68
UBE2W-203ENST00000517608 MSH6P52701 1360 aa4.56□□□□□ -1.68
UBE2W-203ENST00000517608 ADGRL3Q9HAR2 1447 aa4.56□□□□□ -1.68
UBE2W-203ENST00000517608 AKAP6Q13023 2319 aa4.56□□□□□ -1.68
UBE2W-203ENST00000517608 GOLGA6L22H0YM25 854 aa4.56□□□□□ -1.68
UBE2W-203ENST00000517608 TBX22Q9Y458 520 aa4.56□□□□□ -1.68
UBE2W-203ENST00000517608 EIF4G2P78344 907 aaKnown RBP eCLIP4.56□□□□□ -1.68
UBE2W-203ENST00000517608 PDE3BQ13370 1112 aa4.56□□□□□ -1.68
UBE2W-203ENST00000517608 TRPM6Q9BX84 2022 aa4.55□□□□□ -1.68
UBE2W-203ENST00000517608 MAP2P11137 1827 aaKnown RBP4.55□□□□□ -1.68
UBE2W-203ENST00000517608 TNRQ92752 1358 aa4.55□□□□□ -1.68
UBE2W-203ENST00000517608 CDCA8Q53HL2 280 aa4.55□□□□□ -1.68
UBE2W-203ENST00000517608 MDC1Q14676 2089 aaKnown RBP4.55□□□□□ -1.68
UBE2W-203ENST00000517608 CHD3Q12873 2000 aaKnown RBP4.55□□□□□ -1.68
UBE2W-203ENST00000517608 COL16A1Q07092 1604 aaPredicted RBP4.55□□□□□ -1.68
UBE2W-203ENST00000517608 CEMIPQ8WUJ3 1361 aa4.55□□□□□ -1.68
UBE2W-203ENST00000517608 ZGRF1Q86YA3 2104 aa4.55□□□□□ -1.68
UBE2W-203ENST00000517608 EDC4Q6P2E9 1401 aaKnown RBP4.54□□□□□ -1.68
UBE2W-203ENST00000517608 A0A0U1RQG5 324 aaPredicted RBP4.54□□□□□ -1.68
UBE2W-203ENST00000517608 DISP2A7MBM2 1401 aa4.54□□□□□ -1.68
UBE2W-203ENST00000517608 TUBGCP6Q96RT7 1819 aa4.54□□□□□ -1.68
UBE2W-203ENST00000517608 MYBBP1AQ9BQG0 1328 aaKnown RBP4.54□□□□□ -1.68
UBE2W-203ENST00000517608 PPP2R1AP30153 589 aa4.54□□□□□ -1.68
UBE2W-203ENST00000517608 DUSP27Q5VZP5 1158 aa4.54□□□□□ -1.68
UBE2W-203ENST00000517608 KIF24Q5T7B8 1368 aa4.54□□□□□ -1.68
UBE2W-203ENST00000517608 KIAA2026Q5HYC2 2103 aa4.54□□□□□ -1.68
UBE2W-203ENST00000517608 KIF3BO15066 747 aa4.54□□□□□ -1.68
UBE2W-203ENST00000517608 PDIA4P13667 645 aaKnown RBP4.54□□□□□ -1.68
UBE2W-203ENST00000517608 HAP1P54257 671 aaPredicted RBP4.54□□□□□ -1.68
UBE2W-203ENST00000517608 POLR3GLQ9BT43 218 aa4.54□□□□□ -1.68
UBE2W-203ENST00000517608 WNK1Q9H4A3 2382 aa4.54□□□□□ -1.68
UBE2W-203ENST00000517608 CALRP27797 417 aaKnown RBP4.54□□□□□ -1.68
UBE2W-203ENST00000517608 FBLN2P98095 1184 aa4.54□□□□□ -1.68
UBE2W-203ENST00000517608 IL17RAQ96F46 866 aa4.54□□□□□ -1.68
UBE2W-203ENST00000517608 IPO9Q96P70 1041 aaKnown RBP4.54□□□□□ -1.68
UBE2W-203ENST00000517608 TERF1P54274 439 aa4.53□□□□□ -1.68
UBE2W-203ENST00000517608 CHD5Q8TDI0 1954 aa4.53□□□□□ -1.68
UBE2W-203ENST00000517608 MIA3Q5JRA6 1907 aa4.53□□□□□ -1.68
UBE2W-203ENST00000517608 PKD1L3Q7Z443 1732 aa4.53□□□□□ -1.68
UBE2W-203ENST00000517608 DOCK11Q5JSL3 2073 aa4.53□□□□□ -1.68
UBE2W-203ENST00000517608 CREBRFQ8IUR6 639 aa4.53□□□□□ -1.68
UBE2W-203ENST00000517608 APC2O95996 2303 aa4.53□□□□□ -1.68
UBE2W-203ENST00000517608 HSP90AA2PQ14568 343 aaPredicted RBP4.53□□□□□ -1.68
UBE2W-203ENST00000517608 LRP10Q7Z4F1 713 aa4.53□□□□□ -1.68
UBE2W-203ENST00000517608 ARXQ96QS3 562 aa4.53□□□□□ -1.68
UBE2W-203ENST00000517608 AHDC1Q5TGY3 1603 aaPredicted RBP4.53□□□□□ -1.68
UBE2W-203ENST00000517608 ATP10DQ9P241 1426 aa4.53□□□□□ -1.69
UBE2W-203ENST00000517608 FYB1O15117 783 aa4.52□□□□□ -1.69
UBE2W-203ENST00000517608 TSPYL1Q9H0U9 437 aa4.52□□□□□ -1.69
UBE2W-203ENST00000517608 PLCE1Q9P212 2302 aa4.52□□□□□ -1.69
UBE2W-203ENST00000517608 HSP90AA1P07900 732 aaKnown RBP4.52□□□□□ -1.69
UBE2W-203ENST00000517608 DHX8Q14562 1220 aaKnown RBP4.52□□□□□ -1.69
UBE2W-203ENST00000517608 PLCH1Q4KWH8 1693 aa4.52□□□□□ -1.69
UBE2W-203ENST00000517608 EIF3AQ14152 1382 aaKnown RBP4.52□□□□□ -1.69
UBE2W-203ENST00000517608 PRKCSHP14314 528 aaPredicted RBP4.52□□□□□ -1.69
UBE2W-203ENST00000517608 CNGB1Q14028 1251 aaPredicted RBP4.52□□□□□ -1.69
UBE2W-203ENST00000517608 ZNF831Q5JPB2 1677 aa4.52□□□□□ -1.69
UBE2W-203ENST00000517608 DEKP35659 375 aaKnown RBP4.52□□□□□ -1.69
UBE2W-203ENST00000517608 ATP1B4Q9UN42 357 aaPredicted RBP4.52□□□□□ -1.69
UBE2W-203ENST00000517608 MYLKQ15746 1914 aa4.52□□□□□ -1.69
UBE2W-203ENST00000517608 FKBP8Q14318 412 aa4.52□□□□□ -1.69
UBE2W-203ENST00000517608 KDM3BQ7LBC6 1761 aa4.52□□□□□ -1.69
UBE2W-203ENST00000517608 HMGN5P82970 282 aaKnown RBP4.51□□□□□ -1.69
UBE2W-203ENST00000517608 LRP5O75197 1615 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms