RNA–Protein interactions for RNA: ENST00000517484.5

EFCAB13-203, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene EFCAB13, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-203ENST00000517484 NINLQ9Y2I6 1382 aa12.53□□□□□ -0.4
EFCAB13-203ENST00000517484 TOM1L2Q6ZVM7 507 aa12.53□□□□□ -0.4
EFCAB13-203ENST00000517484 AXIN2Q9Y2T1 843 aa12.53□□□□□ -0.4
EFCAB13-203ENST00000517484 SETBP1Q9Y6X0 1596 aa12.53□□□□□ -0.4
EFCAB13-203ENST00000517484 CPS1P31327 1500 aa12.53□□□□□ -0.4
EFCAB13-203ENST00000517484 FAM135BQ49AJ0 1406 aa12.53□□□□□ -0.4
EFCAB13-203ENST00000517484 ANKRD24Q8TF21 1146 aa12.53□□□□□ -0.4
EFCAB13-203ENST00000517484 SYTL4Q96C24 671 aaPredicted RBP12.53□□□□□ -0.4
EFCAB13-203ENST00000517484 REREQ9P2R6 1566 aa12.53□□□□□ -0.4
EFCAB13-203ENST00000517484 FANCIQ9NVI1 1328 aa12.52□□□□□ -0.4
EFCAB13-203ENST00000517484 NPC1L1Q9UHC9 1359 aa12.52□□□□□ -0.41
EFCAB13-203ENST00000517484 CEP170BQ9Y4F5 1589 aaPredicted RBP12.52□□□□□ -0.41
EFCAB13-203ENST00000517484 ZNF530Q6P9A1 599 aaPredicted RBP12.52□□□□□ -0.41
EFCAB13-203ENST00000517484 SSH1Q8WYL5 1049 aa12.52□□□□□ -0.41
EFCAB13-203ENST00000517484 C1orf115Q9H7X2 142 aa12.52□□□□□ -0.41
EFCAB13-203ENST00000517484 USP6P35125 1406 aa12.51□□□□□ -0.41
EFCAB13-203ENST00000517484 ANXA1P04083 346 aa12.51□□□□□ -0.41
EFCAB13-203ENST00000517484 TEFQ10587 303 aa12.51□□□□□ -0.41
EFCAB13-203ENST00000517484 RAPGEF4Q8WZA2 1011 aa12.51□□□□□ -0.41
EFCAB13-203ENST00000517484 NOB1Q9ULX3 412 aaKnown RBP12.51□□□□□ -0.41
EFCAB13-203ENST00000517484 NSD2O96028 1365 aa12.51□□□□□ -0.41
EFCAB13-203ENST00000517484 CD163L1Q9NR16 1453 aa12.5□□□□□ -0.41
EFCAB13-203ENST00000517484 C8orf58Q8NAV2 365 aa12.5□□□□□ -0.41
EFCAB13-203ENST00000517484 C1orf141Q5JVX7 400 aa12.5□□□□□ -0.41
EFCAB13-203ENST00000517484 PLEKHF1Q96S99 279 aa12.5□□□□□ -0.41
EFCAB13-203ENST00000517484 MBIPQ9NS73 344 aa12.5□□□□□ -0.41
EFCAB13-203ENST00000517484 PIP4K2AP48426 406 aaPredicted RBP12.49□□□□□ -0.41
EFCAB13-203ENST00000517484 RARSP54136 660 aaKnown RBP12.49□□□□□ -0.41
EFCAB13-203ENST00000517484 TWISTNBQ3B726 338 aaPredicted RBP12.49□□□□□ -0.41
EFCAB13-203ENST00000517484 TTC21AQ8NDW8 1320 aa12.49□□□□□ -0.41
EFCAB13-203ENST00000517484 ATP7BP35670 1465 aa12.49□□□□□ -0.41
EFCAB13-203ENST00000517484 LGR6Q9HBX8 967 aa12.49□□□□□ -0.41
EFCAB13-203ENST00000517484 UBAP1LF5GYI3 381 aa12.48□□□□□ -0.41
EFCAB13-203ENST00000517484 BRINP3Q76B58 766 aa12.48□□□□□ -0.41
EFCAB13-203ENST00000517484 RLBP1P12271 317 aa12.48□□□□□ -0.41
EFCAB13-203ENST00000517484 KCNH5Q8NCM2 988 aa12.48□□□□□ -0.41
EFCAB13-203ENST00000517484 KAT6BQ8WYB5 2073 aa12.48□□□□□ -0.41
EFCAB13-203ENST00000517484 WDR63Q8IWG1 891 aa12.47□□□□□ -0.41
EFCAB13-203ENST00000517484 ARHGEF28Q8N1W1 1705 aaKnown RBP12.47□□□□□ -0.41
EFCAB13-203ENST00000517484 GNAI1P63096 354 aa12.47□□□□□ -0.41
EFCAB13-203ENST00000517484 AIMP1Q12904 312 aaKnown RBP12.47□□□□□ -0.41
EFCAB13-203ENST00000517484 SLC39A6Q13433 755 aa12.47□□□□□ -0.41
EFCAB13-203ENST00000517484 NPHP3Q7Z494 1330 aa12.47□□□□□ -0.41
EFCAB13-203ENST00000517484 UBR1Q8IWV7 1749 aa12.47□□□□□ -0.41
EFCAB13-203ENST00000517484 CPSF1Q10570 1443 aaKnown RBP12.47□□□□□ -0.41
EFCAB13-203ENST00000517484 TSHZ2Q9NRE2 1034 aa12.46□□□□□ -0.41
EFCAB13-203ENST00000517484 NKTRP30414 1462 aaKnown RBP12.46□□□□□ -0.41
EFCAB13-203ENST00000517484 F6X3S4 739 aa12.46□□□□□ -0.41
EFCAB13-203ENST00000517484 LAMC1P11047 1609 aa12.46□□□□□ -0.41
EFCAB13-203ENST00000517484 LMTK3Q96Q04 1460 aa12.46□□□□□ -0.42
EFCAB13-203ENST00000517484 SLC4A2P04920 1241 aa12.46□□□□□ -0.42
EFCAB13-203ENST00000517484 LMOD3Q0VAK6 560 aa12.46□□□□□ -0.42
EFCAB13-203ENST00000517484 ZKSCAN2Q63HK3 967 aa12.46□□□□□ -0.42
EFCAB13-203ENST00000517484 PTCD1O75127 700 aaKnown RBP12.45□□□□□ -0.42
EFCAB13-203ENST00000517484 DZIP1LQ8IYY4 767 aaKnown RBP12.45□□□□□ -0.42
EFCAB13-203ENST00000517484 IP6K1Q92551 441 aa12.45□□□□□ -0.42
EFCAB13-203ENST00000517484 IFT172Q9UG01 1749 aa12.45□□□□□ -0.42
EFCAB13-203ENST00000517484 FLT4P35916 1363 aa12.44□□□□□ -0.42
EFCAB13-203ENST00000517484 GNAT3A8MTJ3 354 aa12.44□□□□□ -0.42
EFCAB13-203ENST00000517484 ARHGAP23Q9P227 1491 aa12.44□□□□□ -0.42
EFCAB13-203ENST00000517484 KCNQ3O43525 872 aa12.44□□□□□ -0.42
EFCAB13-203ENST00000517484 CALD1Q05682 793 aaKnown RBP12.43□□□□□ -0.42
EFCAB13-203ENST00000517484 RTL5Q5HYW3 569 aaPredicted RBP12.43□□□□□ -0.42
EFCAB13-203ENST00000517484 KIAA1210Q9ULL0 1709 aa12.43□□□□□ -0.42
EFCAB13-203ENST00000517484 GAS2L2Q8NHY3 880 aa12.43□□□□□ -0.42
EFCAB13-203ENST00000517484 FKBP5Q13451 457 aaPredicted RBP12.43□□□□□ -0.42
EFCAB13-203ENST00000517484 BLMP54132 1417 aaPredicted RBP12.43□□□□□ -0.42
EFCAB13-203ENST00000517484 ZNF521Q96K83 1311 aa12.42□□□□□ -0.42
EFCAB13-203ENST00000517484 PLEKHO1Q53GL0 409 aaPredicted RBP12.42□□□□□ -0.42
EFCAB13-203ENST00000517484 TMEM57Q8N5G2 664 aa12.42□□□□□ -0.42
EFCAB13-203ENST00000517484 STK31Q9BXU1 1019 aa12.42□□□□□ -0.42
EFCAB13-203ENST00000517484 TECPR2O15040 1411 aa12.42□□□□□ -0.42
EFCAB13-203ENST00000517484 BTG4Q9NY30 223 aa12.42□□□□□ -0.42
EFCAB13-203ENST00000517484 TRIM27P14373 513 aa12.41□□□□□ -0.42
EFCAB13-203ENST00000517484 MYL6BP14649 208 aa12.41□□□□□ -0.42
EFCAB13-203ENST00000517484 TATP17735 454 aaPredicted RBP12.41□□□□□ -0.42
EFCAB13-203ENST00000517484 ARHGEF25Q86VW2 580 aa12.41□□□□□ -0.42
EFCAB13-203ENST00000517484 NEURL4Q96JN8 1562 aa12.41□□□□□ -0.42
EFCAB13-203ENST00000517484 ADGRL3Q9HAR2 1447 aa12.41□□□□□ -0.42
EFCAB13-203ENST00000517484 IL17REQ8NFR9 667 aa12.41□□□□□ -0.42
EFCAB13-203ENST00000517484 SLIT1O75093 1534 aa12.41□□□□□ -0.42
EFCAB13-203ENST00000517484 KIAA0232Q92628 1395 aa12.41□□□□□ -0.42
EFCAB13-203ENST00000517484 MYO3AQ8NEV4 1616 aa12.41□□□□□ -0.42
EFCAB13-203ENST00000517484 NRXN3Q9Y4C0 1643 aa12.4□□□□□ -0.42
EFCAB13-203ENST00000517484 BTBD11A6QL63 1104 aa12.4□□□□□ -0.42
EFCAB13-203ENST00000517484 IPO8O15397 1037 aaKnown RBP12.4□□□□□ -0.42
EFCAB13-203ENST00000517484 CFAP44Q96MT7 982 aa12.4□□□□□ -0.42
EFCAB13-203ENST00000517484 ZBTB47Q9UFB7 747 aaPredicted RBP12.4□□□□□ -0.42
EFCAB13-203ENST00000517484 PIK3R4Q99570 1358 aa12.4□□□□□ -0.42
EFCAB13-203ENST00000517484 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.4□□□□□ -0.42
EFCAB13-203ENST00000517484 MYOM1P52179 1685 aa12.39□□□□□ -0.43
EFCAB13-203ENST00000517484 SBNO1A3KN83 1393 aa12.39□□□□□ -0.43
EFCAB13-203ENST00000517484 NFATC2IPQ8NCF5 419 aa12.39□□□□□ -0.43
EFCAB13-203ENST00000517484 RBM19Q9Y4C8 960 aaKnown RBP12.39□□□□□ -0.43
EFCAB13-203ENST00000517484 LARP1Q6PKG0 1096 aaKnown RBP12.39□□□□□ -0.43
EFCAB13-203ENST00000517484 HDGFL1Q5TGJ6 251 aa12.39□□□□□ -0.43
EFCAB13-203ENST00000517484 MED14O60244 1454 aa12.39□□□□□ -0.43
EFCAB13-203ENST00000517484 PRAMEF22A3QJZ6 481 aa12.38□□□□□ -0.43
EFCAB13-203ENST00000517484 ATF7IPQ6VMQ6 1270 aa12.38□□□□□ -0.43
EFCAB13-203ENST00000517484 G2E3Q7L622 706 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms