RNA–Protein interactions for RNA: ENST00000517276.1

SCARNA11.3-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 130 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.3-201ENST00000517276 SCAMP3O14828 347 aaKnown RBP3.93□□□□□ -1.78
SCARNA11.3-201ENST00000517276 ZBTB7BO15156 539 aaPredicted RBP3.93□□□□□ -1.78
SCARNA11.3-201ENST00000517276 C21orf2O43822 256 aa3.93□□□□□ -1.78
SCARNA11.3-201ENST00000517276 ARHGAP4P98171 946 aa3.93□□□□□ -1.78
SCARNA11.3-201ENST00000517276 EML3Q32P44 896 aa3.93□□□□□ -1.78
SCARNA11.3-201ENST00000517276 NT5DC4Q86YG4 428 aa3.93□□□□□ -1.78
SCARNA11.3-201ENST00000517276 ZSCAN29Q8IWY8 852 aaPredicted RBP3.93□□□□□ -1.78
SCARNA11.3-201ENST00000517276 TMEM87AQ8NBN3 555 aa3.93□□□□□ -1.78
SCARNA11.3-201ENST00000517276 PURBQ96QR8 312 aaKnown RBP3.93□□□□□ -1.78
SCARNA11.3-201ENST00000517276 TINF2Q9BSI4 451 aa3.93□□□□□ -1.78
SCARNA11.3-201ENST00000517276 MAP10Q9P2G4 905 aa3.93□□□□□ -1.78
SCARNA11.3-201ENST00000517276 PCDHB9Q9Y5E1 797 aa3.93□□□□□ -1.78
SCARNA11.3-201ENST00000517276 LZTS3O60299 673 aaPredicted RBP3.92□□□□□ -1.78
SCARNA11.3-201ENST00000517276 FMNL1O95466 1100 aaPredicted RBP3.92□□□□□ -1.78
SCARNA11.3-201ENST00000517276 CFHP08603 1231 aa3.92□□□□□ -1.78
SCARNA11.3-201ENST00000517276 EVX2Q03828 476 aa3.92□□□□□ -1.78
SCARNA11.3-201ENST00000517276 PUS10Q3MIT2 529 aaKnown RBP3.92□□□□□ -1.78
SCARNA11.3-201ENST00000517276 TRAF7Q6Q0C0 670 aa3.92□□□□□ -1.78
SCARNA11.3-201ENST00000517276 LYPD8Q6UX82 237 aa3.92□□□□□ -1.78
SCARNA11.3-201ENST00000517276 RETREG3Q86VR2 466 aa3.92□□□□□ -1.78
SCARNA11.3-201ENST00000517276 METTL16Q86W50 562 aaKnown RBP3.92□□□□□ -1.78
SCARNA11.3-201ENST00000517276 OCSTAMPQ9BR26 566 aa3.92□□□□□ -1.78
SCARNA11.3-201ENST00000517276 PIF1Q9H611 641 aa3.92□□□□□ -1.78
SCARNA11.3-201ENST00000517276 BCL2L12Q9HB09 334 aa3.92□□□□□ -1.78
SCARNA11.3-201ENST00000517276 CAPN10Q9HC96 672 aa3.92□□□□□ -1.78
SCARNA11.3-201ENST00000517276 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.92□□□□□ -1.78
SCARNA11.3-201ENST00000517276 LHX6Q9UPM6 363 aa3.92□□□□□ -1.78
SCARNA11.3-201ENST00000517276 ARID4BQ4LE39 1312 aaPredicted RBP3.92□□□□□ -1.78
SCARNA11.3-201ENST00000517276 MARCH6O60337 910 aa3.91□□□□□ -1.78
SCARNA11.3-201ENST00000517276 PTPREP23469 700 aa3.91□□□□□ -1.78
SCARNA11.3-201ENST00000517276 GTF2F1P35269 517 aaKnown RBP eCLIP3.91□□□□□ -1.78
SCARNA11.3-201ENST00000517276 ATP6V1AP38606 617 aa3.91□□□□□ -1.78
SCARNA11.3-201ENST00000517276 TNNI2P48788 182 aa3.91□□□□□ -1.78
SCARNA11.3-201ENST00000517276 NAA30Q147X3 362 aaPredicted RBP3.91□□□□□ -1.78
SCARNA11.3-201ENST00000517276 CCDC144BQ3MJ40 725 aa3.91□□□□□ -1.78
SCARNA11.3-201ENST00000517276 TMC7Q7Z402 723 aa3.91□□□□□ -1.78
SCARNA11.3-201ENST00000517276 CERS3Q8IU89 383 aa3.91□□□□□ -1.78
SCARNA11.3-201ENST00000517276 RGL4Q8IZJ4 473 aa3.91□□□□□ -1.78
SCARNA11.3-201ENST00000517276 PMFBP1Q8TBY8 1022 aa3.91□□□□□ -1.78
SCARNA11.3-201ENST00000517276 ACBD3Q9H3P7 528 aa3.91□□□□□ -1.78
SCARNA11.3-201ENST00000517276 KIAA1468Q9P260 1216 aa3.91□□□□□ -1.78
SCARNA11.3-201ENST00000517276 PRKAG2Q9UGJ0 569 aa3.91□□□□□ -1.78
SCARNA11.3-201ENST00000517276 SBNO2Q9Y2G9 1366 aa3.9□□□□□ -1.78
SCARNA11.3-201ENST00000517276 F12P00748 615 aaPredicted RBP3.9□□□□□ -1.79
SCARNA11.3-201ENST00000517276 ATP1A2P50993 1020 aa3.9□□□□□ -1.79
SCARNA11.3-201ENST00000517276 SEC13P55735 322 aa3.9□□□□□ -1.79
SCARNA11.3-201ENST00000517276 GTF2IP78347 998 aa3.9□□□□□ -1.79
SCARNA11.3-201ENST00000517276 FKBP4Q02790 459 aaKnown RBP eCLIP3.9□□□□□ -1.79
SCARNA11.3-201ENST00000517276 FKBP5Q13451 457 aaPredicted RBP3.9□□□□□ -1.79
SCARNA11.3-201ENST00000517276 COL19A1Q14993 1142 aa3.9□□□□□ -1.79
SCARNA11.3-201ENST00000517276 GRIPAP1Q4V328 841 aa3.9□□□□□ -1.79
SCARNA11.3-201ENST00000517276 OXLD1Q5BKU9 147 aa3.9□□□□□ -1.79
SCARNA11.3-201ENST00000517276 PPP4R3BQ5MIZ7 849 aa3.9□□□□□ -1.79
SCARNA11.3-201ENST00000517276 RNF19BQ6ZMZ0 732 aa3.9□□□□□ -1.79
SCARNA11.3-201ENST00000517276 NOL8Q76FK4 1167 aaKnown RBP3.9□□□□□ -1.79
SCARNA11.3-201ENST00000517276 TRIM50Q86XT4 487 aa3.9□□□□□ -1.79
SCARNA11.3-201ENST00000517276 SIX5Q8N196 739 aa3.9□□□□□ -1.79
SCARNA11.3-201ENST00000517276 LARGE2Q8N3Y3 721 aa3.9□□□□□ -1.79
SCARNA11.3-201ENST00000517276 TPCN2Q8NHX9 752 aa3.9□□□□□ -1.79
SCARNA11.3-201ENST00000517276 GPATCH3Q96I76 525 aa3.9□□□□□ -1.79
SCARNA11.3-201ENST00000517276 CCDC85AQ96PX6 553 aaPredicted RBP3.9□□□□□ -1.79
SCARNA11.3-201ENST00000517276 SETDB2Q96T68 719 aa3.9□□□□□ -1.79
SCARNA11.3-201ENST00000517276 HINFPQ9BQA5 517 aa3.9□□□□□ -1.79
SCARNA11.3-201ENST00000517276 SEPT9Q9UHD8 586 aaPredicted RBP3.9□□□□□ -1.79
SCARNA11.3-201ENST00000517276 NOD1Q9Y239 953 aa3.9□□□□□ -1.79
SCARNA11.3-201ENST00000517276 SLC27A5Q9Y2P5 690 aa3.9□□□□□ -1.79
SCARNA11.3-201ENST00000517276 TLDC2A0PJX2 215 aa3.89□□□□□ -1.79
SCARNA11.3-201ENST00000517276 RAB11FIP3O75154 756 aa3.89□□□□□ -1.79
SCARNA11.3-201ENST00000517276 ATP2B1P20020 1258 aa3.89□□□□□ -1.79
SCARNA11.3-201ENST00000517276 DNAJA1P31689 397 aaKnown RBP3.89□□□□□ -1.79
SCARNA11.3-201ENST00000517276 CTHP32929 405 aa3.89□□□□□ -1.79
SCARNA11.3-201ENST00000517276 MAPK8P45983 427 aa3.89□□□□□ -1.79
SCARNA11.3-201ENST00000517276 XPCQ01831 940 aaPredicted RBP3.89□□□□□ -1.79
SCARNA11.3-201ENST00000517276 CCDC102BQ68D86 513 aa3.89□□□□□ -1.79
SCARNA11.3-201ENST00000517276 DESI1Q6ICB0 168 aa3.89□□□□□ -1.79
SCARNA11.3-201ENST00000517276 BLOC1S3Q6QNY0 202 aa3.89□□□□□ -1.79
SCARNA11.3-201ENST00000517276 NOP9Q86U38 636 aaKnown RBP3.89□□□□□ -1.79
SCARNA11.3-201ENST00000517276 DUSP9Q99956 384 aaKnown RBP3.89□□□□□ -1.79
SCARNA11.3-201ENST00000517276 CCSER2Q9H7U1 834 aa3.89□□□□□ -1.79
SCARNA11.3-201ENST00000517276 PARP2Q9UGN5 583 aa3.89□□□□□ -1.79
SCARNA11.3-201ENST00000517276 CHIC2Q9UKJ5 165 aa3.89□□□□□ -1.79
SCARNA11.3-201ENST00000517276 WWC3Q9ULE0 1092 aa3.89□□□□□ -1.79
SCARNA11.3-201ENST00000517276 TMA7Q9Y2S6 64 aaKnown RBP3.89□□□□□ -1.79
SCARNA11.3-201ENST00000517276 RNF40O75150 1001 aa3.88□□□□□ -1.79
SCARNA11.3-201ENST00000517276 FANCCQ00597 558 aa3.88□□□□□ -1.79
SCARNA11.3-201ENST00000517276 PSME1Q06323 249 aa3.88□□□□□ -1.79
SCARNA11.3-201ENST00000517276 SF3B2Q13435 895 aaKnown RBP3.88□□□□□ -1.79
SCARNA11.3-201ENST00000517276 MAP7D1Q3KQU3 841 aa3.88□□□□□ -1.79
SCARNA11.3-201ENST00000517276 MORN1Q5T089 497 aa3.88□□□□□ -1.79
SCARNA11.3-201ENST00000517276 SDE2Q6IQ49 451 aa3.88□□□□□ -1.79
SCARNA11.3-201ENST00000517276 GPR153Q6NV75 609 aa3.88□□□□□ -1.79
SCARNA11.3-201ENST00000517276 FAM9AQ8IZU1 332 aaPredicted RBP3.88□□□□□ -1.79
SCARNA11.3-201ENST00000517276 NLGN1Q8N2Q7 840 aa3.88□□□□□ -1.79
SCARNA11.3-201ENST00000517276 TSEN2Q8NCE0 465 aaKnown RBP3.88□□□□□ -1.79
SCARNA11.3-201ENST00000517276 MICAL1Q8TDZ2 1067 aa3.88□□□□□ -1.79
SCARNA11.3-201ENST00000517276 RNF34Q969K3 372 aa3.88□□□□□ -1.79
SCARNA11.3-201ENST00000517276 VTI1AQ96AJ9 217 aa3.88□□□□□ -1.79
SCARNA11.3-201ENST00000517276 KCNK17Q96T54 332 aa3.88□□□□□ -1.79
SCARNA11.3-201ENST00000517276 BCL11AQ9H165 835 aa3.88□□□□□ -1.79
SCARNA11.3-201ENST00000517276 CUEDC1Q9NWM3 386 aaPredicted RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms