RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 ERFEQ4G0M1 354 aa0.68□□□□□ -2.3
RNU6-1238P-201ENST00000517215 NUDT18Q6ZVK8 323 aa0.68□□□□□ -2.3
RNU6-1238P-201ENST00000517215 CILP2Q8IUL8 1156 aa0.68□□□□□ -2.3
RNU6-1238P-201ENST00000517215 MPNDQ8N594 471 aa0.68□□□□□ -2.3
RNU6-1238P-201ENST00000517215 FAM160A2Q8N612 972 aaPredicted RBP0.68□□□□□ -2.3
RNU6-1238P-201ENST00000517215 MEIOBQ8N635 442 aa0.68□□□□□ -2.3
RNU6-1238P-201ENST00000517215 EHBP1Q8NDI1 1231 aa0.68□□□□□ -2.3
RNU6-1238P-201ENST00000517215 GMCL1Q96IK5 515 aa0.68□□□□□ -2.3
RNU6-1238P-201ENST00000517215 ZFP91Q96JP5 570 aaPredicted RBP0.68□□□□□ -2.3
RNU6-1238P-201ENST00000517215 C20orf173Q96LM9 149 aa0.68□□□□□ -2.3
RNU6-1238P-201ENST00000517215 NACC1Q96RE7 527 aa0.68□□□□□ -2.3
RNU6-1238P-201ENST00000517215 PRDM9Q9NQV7 894 aa0.68□□□□□ -2.3
RNU6-1238P-201ENST00000517215 GDF2Q9UK05 429 aaPredicted RBP0.68□□□□□ -2.3
RNU6-1238P-201ENST00000517215 SENP3-EIF4A1A0A087X0R7 540 aa0.67□□□□□ -2.3
RNU6-1238P-201ENST00000517215 GPR25O00155 361 aa0.67□□□□□ -2.3
RNU6-1238P-201ENST00000517215 FARP2O94887 1054 aaPredicted RBP0.67□□□□□ -2.3
RNU6-1238P-201ENST00000517215 CFHP08603 1231 aa0.67□□□□□ -2.3
RNU6-1238P-201ENST00000517215 INHBBP09529 407 aa0.67□□□□□ -2.3
RNU6-1238P-201ENST00000517215 JUNBP17275 347 aaPredicted RBP0.67□□□□□ -2.3
RNU6-1238P-201ENST00000517215 ITGB5P18084 799 aa0.67□□□□□ -2.3
RNU6-1238P-201ENST00000517215 MSS51Q4VC12 460 aa0.67□□□□□ -2.3
RNU6-1238P-201ENST00000517215 FOXR1Q6PIV2 292 aa0.67□□□□□ -2.3
RNU6-1238P-201ENST00000517215 BHLHA9Q7RTU4 235 aa0.67□□□□□ -2.3
RNU6-1238P-201ENST00000517215 SLC51AQ86UW1 340 aa0.67□□□□□ -2.3
RNU6-1238P-201ENST00000517215 C1QL4Q86Z23 238 aa0.67□□□□□ -2.3
RNU6-1238P-201ENST00000517215 ZSCAN18Q8TBC5 510 aaPredicted RBP0.67□□□□□ -2.3
RNU6-1238P-201ENST00000517215 VWCEQ96DN2 955 aa0.67□□□□□ -2.3
RNU6-1238P-201ENST00000517215 THAP11Q96EK4 314 aa0.67□□□□□ -2.3
RNU6-1238P-201ENST00000517215 TOX2Q96NM4 488 aa0.67□□□□□ -2.3
RNU6-1238P-201ENST00000517215 TNFRSF18Q9Y5U5 241 aa0.67□□□□□ -2.3
RNU6-1238P-201ENST00000517215 PLEKHG3A1L390 1219 aa0.66□□□□□ -2.3
RNU6-1238P-201ENST00000517215 FOXD2O60548 495 aaPredicted RBP0.66□□□□□ -2.3
RNU6-1238P-201ENST00000517215 ZIC2O95409 532 aaPredicted RBP0.66□□□□□ -2.3
RNU6-1238P-201ENST00000517215 ZSCAN22P10073 491 aaPredicted RBP0.66□□□□□ -2.3
RNU6-1238P-201ENST00000517215 SPINK2P20155 84 aa0.66□□□□□ -2.3
RNU6-1238P-201ENST00000517215 MX2P20592 715 aa0.66□□□□□ -2.3
RNU6-1238P-201ENST00000517215 CBLBQ13191 982 aa0.66□□□□□ -2.3
RNU6-1238P-201ENST00000517215 ZXDCQ2QGD7 858 aaPredicted RBP0.66□□□□□ -2.3
RNU6-1238P-201ENST00000517215 KSR1Q8IVT5 923 aa0.66□□□□□ -2.3
RNU6-1238P-201ENST00000517215 CERKQ8TCT0 537 aa0.66□□□□□ -2.3
RNU6-1238P-201ENST00000517215 TRIM41Q8WV44 630 aa0.66□□□□□ -2.3
RNU6-1238P-201ENST00000517215 TP53INP1Q96A56 240 aa0.66□□□□□ -2.3
RNU6-1238P-201ENST00000517215 ZNF837Q96EG3 531 aaPredicted RBP0.66□□□□□ -2.3
RNU6-1238P-201ENST00000517215 TSEN34Q9BSV6 310 aaKnown RBP0.66□□□□□ -2.3
RNU6-1238P-201ENST00000517215 ZFAND3Q9H8U3 227 aa0.66□□□□□ -2.3
RNU6-1238P-201ENST00000517215 CUEDC1Q9NWM3 386 aaPredicted RBP0.66□□□□□ -2.3
RNU6-1238P-201ENST00000517215 RBM27Q9P2N5 1060 aaKnown RBP0.66□□□□□ -2.3
RNU6-1238P-201ENST00000517215 TLL2Q9Y6L7 1015 aa0.66□□□□□ -2.3
RNU6-1238P-201ENST00000517215 SPDYE3A6NKU9 549 aa0.65□□□□□ -2.31
RNU6-1238P-201ENST00000517215 VGFO15240 615 aaPredicted RBP0.65□□□□□ -2.31
RNU6-1238P-201ENST00000517215 WNT11O96014 354 aa0.65□□□□□ -2.31
RNU6-1238P-201ENST00000517215 PRRT3Q5FWE3 981 aa0.65□□□□□ -2.31
RNU6-1238P-201ENST00000517215 PPP1R15BQ5SWA1 713 aa0.65□□□□□ -2.31
RNU6-1238P-201ENST00000517215 SLCO4C1Q6ZQN7 724 aa0.65□□□□□ -2.31
RNU6-1238P-201ENST00000517215 GOLGA6L1Q8N7Z2 621 aa0.65□□□□□ -2.31
RNU6-1238P-201ENST00000517215 BHLHE22Q8NFJ8 381 aaPredicted RBP0.65□□□□□ -2.31
RNU6-1238P-201ENST00000517215 ITPKCQ96DU7 683 aa0.65□□□□□ -2.31
RNU6-1238P-201ENST00000517215 RBM33Q96EV2 1170 aaKnown RBP0.65□□□□□ -2.31
RNU6-1238P-201ENST00000517215 TRIM11Q96F44 468 aa0.65□□□□□ -2.31
RNU6-1238P-201ENST00000517215 BTBD6Q96KE9 485 aa0.65□□□□□ -2.31
RNU6-1238P-201ENST00000517215 PLVAPQ9BX97 442 aa0.65□□□□□ -2.31
RNU6-1238P-201ENST00000517215 FAM53CQ9NYF3 392 aa0.65□□□□□ -2.31
RNU6-1238P-201ENST00000517215 NOTCH2Q04721 2471 aa0.64□□□□□ -2.31
RNU6-1238P-201ENST00000517215 RIOK3O14730 519 aaKnown RBP0.64□□□□□ -2.31
RNU6-1238P-201ENST00000517215 FMNL1O95466 1100 aaPredicted RBP0.64□□□□□ -2.31
RNU6-1238P-201ENST00000517215 HOXA5P20719 270 aa0.64□□□□□ -2.31
RNU6-1238P-201ENST00000517215 MMP16P51512 607 aa0.64□□□□□ -2.31
RNU6-1238P-201ENST00000517215 EN1Q05925 392 aaPredicted RBP0.64□□□□□ -2.31
RNU6-1238P-201ENST00000517215 ADGRE1Q14246 886 aa0.64□□□□□ -2.31
RNU6-1238P-201ENST00000517215 TSR1Q2NL82 804 aaKnown RBP0.64□□□□□ -2.31
RNU6-1238P-201ENST00000517215 LRCH2Q5VUJ6 765 aa0.64□□□□□ -2.31
RNU6-1238P-201ENST00000517215 CBLL1Q75N03 491 aa0.64□□□□□ -2.31
RNU6-1238P-201ENST00000517215 PRRT2Q7Z6L0 340 aaPredicted RBP0.64□□□□□ -2.31
RNU6-1238P-201ENST00000517215 TXNRD3Q86VQ6 643 aa0.64□□□□□ -2.31
RNU6-1238P-201ENST00000517215 LRRC56Q8IYG6 542 aaPredicted RBP0.64□□□□□ -2.31
RNU6-1238P-201ENST00000517215 TRIM22Q8IYM9 498 aa0.64□□□□□ -2.31
RNU6-1238P-201ENST00000517215 ABI1Q8IZP0 508 aa0.64□□□□□ -2.31
RNU6-1238P-201ENST00000517215 SLC38A3Q99624 504 aa0.64□□□□□ -2.31
RNU6-1238P-201ENST00000517215 SALL2Q9Y467 1007 aaPredicted RBP0.64□□□□□ -2.31
RNU6-1238P-201ENST00000517215 SPINT1O43278 529 aa0.63□□□□□ -2.31
RNU6-1238P-201ENST00000517215 MAP3K7O43318 606 aa0.63□□□□□ -2.31
RNU6-1238P-201ENST00000517215 PPP1R37O75864 691 aa0.63□□□□□ -2.31
RNU6-1238P-201ENST00000517215 ADRB1P08588 477 aa0.63□□□□□ -2.31
RNU6-1238P-201ENST00000517215 HMGA2P52926 109 aa0.63□□□□□ -2.31
RNU6-1238P-201ENST00000517215 MBTPS1Q14703 1052 aa0.63□□□□□ -2.31
RNU6-1238P-201ENST00000517215 PUS10Q3MIT2 529 aaKnown RBP0.63□□□□□ -2.31
RNU6-1238P-201ENST00000517215 KLRG1Q96E93 195 aa0.63□□□□□ -2.31
RNU6-1238P-201ENST00000517215 ZNF764Q96H86 408 aaPredicted RBP0.63□□□□□ -2.31
RNU6-1238P-201ENST00000517215 SORCS2Q96PQ0 1159 aa0.63□□□□□ -2.31
RNU6-1238P-201ENST00000517215 SLC4A9Q96Q91 983 aa0.63□□□□□ -2.31
RNU6-1238P-201ENST00000517215 SSBP4Q9BWG4 385 aaPredicted RBP0.63□□□□□ -2.31
RNU6-1238P-201ENST00000517215 SLITRK6Q9H5Y7 841 aa0.63□□□□□ -2.31
RNU6-1238P-201ENST00000517215 MEGF11A6BM72 1044 aa0.62□□□□□ -2.31
RNU6-1238P-201ENST00000517215 C9orf172C9J069 976 aa0.62□□□□□ -2.31
RNU6-1238P-201ENST00000517215 SPTLC1O15269 473 aa0.62□□□□□ -2.31
RNU6-1238P-201ENST00000517215 EPXP11678 715 aa0.62□□□□□ -2.31
RNU6-1238P-201ENST00000517215 SYN1P17600 705 aa0.62□□□□□ -2.31
RNU6-1238P-201ENST00000517215 FECHP22830 423 aa0.62□□□□□ -2.31
RNU6-1238P-201ENST00000517215 GRNP28799 593 aaKnown RBP0.62□□□□□ -2.31
RNU6-1238P-201ENST00000517215 CRB2Q5IJ48 1285 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms