RNA–Protein interactions for RNA: ENST00000517164.1

RNU6-1028P-201, Transcript of RNA, U6 small nuclear 1028, pseudogene, humanhuman

BASIC

Gene RNU6-1028P, Length 93 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1028P-201ENST00000517164 TFIP11Q9UBB9 837 aaKnown RBP9.08□□□□□ -0.96
RNU6-1028P-201ENST00000517164 VASH1Q7L8A9 365 aaPredicted RBP9.07□□□□□ -0.96
RNU6-1028P-201ENST00000517164 RNF135Q8IUD6 432 aa9.07□□□□□ -0.96
RNU6-1028P-201ENST00000517164 CDV3Q9UKY7 258 aaKnown RBP9.07□□□□□ -0.96
RNU6-1028P-201ENST00000517164 MAP4K5Q9Y4K4 846 aa9.07□□□□□ -0.96
RNU6-1028P-201ENST00000517164 ESPNB1AK53 854 aa9.06□□□□□ -0.96
RNU6-1028P-201ENST00000517164 ATP9BO43861 1147 aa9.06□□□□□ -0.96
RNU6-1028P-201ENST00000517164 SKIP12755 728 aa9.06□□□□□ -0.96
RNU6-1028P-201ENST00000517164 RFX1P22670 979 aa9.06□□□□□ -0.96
RNU6-1028P-201ENST00000517164 CDK15Q96Q40 435 aa9.06□□□□□ -0.96
RNU6-1028P-201ENST00000517164 KCTD15Q96SI1 283 aaPredicted RBP9.06□□□□□ -0.96
RNU6-1028P-201ENST00000517164 MAFBQ9Y5Q3 323 aaPredicted RBP9.06□□□□□ -0.96
RNU6-1028P-201ENST00000517164 LMOD1P29536 600 aaPredicted RBP9.05□□□□□ -0.96
RNU6-1028P-201ENST00000517164 RAB15P59190 212 aa9.05□□□□□ -0.96
RNU6-1028P-201ENST00000517164 TSGA10IPQ3SY00 556 aa9.05□□□□□ -0.96
RNU6-1028P-201ENST00000517164 NFATC2IPQ8NCF5 419 aa9.05□□□□□ -0.96
RNU6-1028P-201ENST00000517164 FSHRP23945 695 aa9.04□□□□□ -0.96
RNU6-1028P-201ENST00000517164 GRM5P41594 1212 aa9.04□□□□□ -0.96
RNU6-1028P-201ENST00000517164 INTS6LQ5JSJ4 861 aaKnown RBP9.04□□□□□ -0.96
RNU6-1028P-201ENST00000517164 MPNDQ8N594 471 aa9.04□□□□□ -0.96
RNU6-1028P-201ENST00000517164 PLPP7Q8NBV4 271 aa9.04□□□□□ -0.96
RNU6-1028P-201ENST00000517164 CCDC85AQ96PX6 553 aaPredicted RBP9.04□□□□□ -0.96
RNU6-1028P-201ENST00000517164 USP17L5A8MUK1 530 aa9.03□□□□□ -0.96
RNU6-1028P-201ENST00000517164 TNFRSF10AO00220 468 aa9.03□□□□□ -0.96
RNU6-1028P-201ENST00000517164 GDF9O60383 454 aa9.03□□□□□ -0.96
RNU6-1028P-201ENST00000517164 DEPDC4Q8N2C3 294 aa9.03□□□□□ -0.96
RNU6-1028P-201ENST00000517164 CHIC2Q9UKJ5 165 aa9.03□□□□□ -0.96
RNU6-1028P-201ENST00000517164 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.02□□□□□ -0.97
RNU6-1028P-201ENST00000517164 USP17L3A6NCW0 530 aa9.02□□□□□ -0.97
RNU6-1028P-201ENST00000517164 USP17L4A6NCW7 530 aa9.02□□□□□ -0.97
RNU6-1028P-201ENST00000517164 ADH1CP00326 375 aa9.02□□□□□ -0.97
RNU6-1028P-201ENST00000517164 RNF20Q5VTR2 975 aa9.02□□□□□ -0.97
RNU6-1028P-201ENST00000517164 TRAF7Q6Q0C0 670 aa9.02□□□□□ -0.97
RNU6-1028P-201ENST00000517164 USP17L2Q6R6M4 530 aa9.02□□□□□ -0.97
RNU6-1028P-201ENST00000517164 TRIM67Q6ZTA4 783 aa9.02□□□□□ -0.97
RNU6-1028P-201ENST00000517164 USP17L1Q7RTZ2 530 aa9.02□□□□□ -0.97
RNU6-1028P-201ENST00000517164 SEPT12Q8IYM1 358 aa9.02□□□□□ -0.97
RNU6-1028P-201ENST00000517164 ALDH1A1P00352 501 aa9.01□□□□□ -0.97
RNU6-1028P-201ENST00000517164 DOLKQ9UPQ8 538 aa9.01□□□□□ -0.97
RNU6-1028P-201ENST00000517164 NCOA4Q13772 614 aa9□□□□□ -0.97
RNU6-1028P-201ENST00000517164 PLEKHM2Q8IWE5 1019 aa9□□□□□ -0.97
RNU6-1028P-201ENST00000517164 SNIP1Q8TAD8 396 aaKnown RBP9□□□□□ -0.97
RNU6-1028P-201ENST00000517164 CDCA7Q9BWT1 371 aaPredicted RBP9□□□□□ -0.97
RNU6-1028P-201ENST00000517164 PCDHB11Q9Y5F2 797 aa9□□□□□ -0.97
RNU6-1028P-201ENST00000517164 ERVH48-1M5A8F1 160 aa8.99□□□□□ -0.97
RNU6-1028P-201ENST00000517164 NR3C2P08235 984 aa8.99□□□□□ -0.97
RNU6-1028P-201ENST00000517164 SRPK2P78362 688 aaKnown RBP8.99□□□□□ -0.97
RNU6-1028P-201ENST00000517164 MAP7D1Q3KQU3 841 aa8.99□□□□□ -0.97
RNU6-1028P-201ENST00000517164 OXLD1Q5BKU9 147 aa8.99□□□□□ -0.97
RNU6-1028P-201ENST00000517164 J3QL48 77 aa8.98□□□□□ -0.97
RNU6-1028P-201ENST00000517164 NR5A1Q13285 461 aa8.98□□□□□ -0.97
RNU6-1028P-201ENST00000517164 CDCA8Q53HL2 280 aa8.98□□□□□ -0.97
RNU6-1028P-201ENST00000517164 CYP4X1Q8N118 509 aa8.98□□□□□ -0.97
RNU6-1028P-201ENST00000517164 PBXIP1Q96AQ6 731 aa8.98□□□□□ -0.97
RNU6-1028P-201ENST00000517164 TOR4AQ9NXH8 423 aa8.98□□□□□ -0.97
RNU6-1028P-201ENST00000517164 TTC24A2A3L6 582 aaPredicted RBP8.97□□□□□ -0.97
RNU6-1028P-201ENST00000517164 RGS20O76081 388 aa8.97□□□□□ -0.97
RNU6-1028P-201ENST00000517164 PRR20EP86478 221 aa8.97□□□□□ -0.97
RNU6-1028P-201ENST00000517164 PRR20CP86479 221 aa8.97□□□□□ -0.97
RNU6-1028P-201ENST00000517164 PRR20DP86480 221 aa8.97□□□□□ -0.97
RNU6-1028P-201ENST00000517164 PRR20BP86481 221 aa8.97□□□□□ -0.97
RNU6-1028P-201ENST00000517164 PRR20AP86496 221 aa8.97□□□□□ -0.97
RNU6-1028P-201ENST00000517164 KANK4Q5T7N3 995 aaPredicted RBP8.97□□□□□ -0.97
RNU6-1028P-201ENST00000517164 CCDC116Q8IYX3 515 aa8.97□□□□□ -0.97
RNU6-1028P-201ENST00000517164 TMPRSS4Q9NRS4 437 aa8.97□□□□□ -0.97
RNU6-1028P-201ENST00000517164 WASF2Q9Y6W5 498 aa8.97□□□□□ -0.97
RNU6-1028P-201ENST00000517164 NNTQ13423 1086 aa8.96□□□□□ -0.98
RNU6-1028P-201ENST00000517164 EML3Q32P44 896 aa8.96□□□□□ -0.98
RNU6-1028P-201ENST00000517164 LZTS3O60299 673 aaPredicted RBP8.95□□□□□ -0.98
RNU6-1028P-201ENST00000517164 PPP1R15AO75807 674 aaPredicted RBP8.95□□□□□ -0.98
RNU6-1028P-201ENST00000517164 SCTRP47872 440 aa8.95□□□□□ -0.98
RNU6-1028P-201ENST00000517164 DHX9Q08211 1270 aaKnown RBP8.95□□□□□ -0.98
RNU6-1028P-201ENST00000517164 PPP1R26Q5T8A7 1209 aaPredicted RBP8.95□□□□□ -0.98
RNU6-1028P-201ENST00000517164 CCDC125Q86Z20 511 aa8.95□□□□□ -0.98
RNU6-1028P-201ENST00000517164 VRTNQ9H8Y1 702 aa8.95□□□□□ -0.98
RNU6-1028P-201ENST00000517164 MKRN1Q9UHC7 482 aaKnown RBP8.95□□□□□ -0.98
RNU6-1028P-201ENST00000517164 SMPD1P17405 629 aa8.94□□□□□ -0.98
RNU6-1028P-201ENST00000517164 ZNF784Q8NCA9 323 aaPredicted RBP8.94□□□□□ -0.98
RNU6-1028P-201ENST00000517164 ARXQ96QS3 562 aa8.94□□□□□ -0.98
RNU6-1028P-201ENST00000517164 CYLDQ9NQC7 956 aa8.93□□□□□ -0.98
RNU6-1028P-201ENST00000517164 ERVK-9P63128 1117 aa8.92□□□□□ -0.98
RNU6-1028P-201ENST00000517164 PDZRN3Q9UPQ7 1066 aa8.92□□□□□ -0.98
RNU6-1028P-201ENST00000517164 NOD1Q9Y239 953 aa8.92□□□□□ -0.98
RNU6-1028P-201ENST00000517164 EMILIN1Q9Y6C2 1016 aa8.92□□□□□ -0.98
RNU6-1028P-201ENST00000517164 ATP5J2-PTCD1G3V325 749 aa8.91□□□□□ -0.98
RNU6-1028P-201ENST00000517164 LILRA1O75019 489 aa8.91□□□□□ -0.98
RNU6-1028P-201ENST00000517164 CLDN10P78369 228 aa8.91□□□□□ -0.98
RNU6-1028P-201ENST00000517164 USP4Q13107 963 aa8.91□□□□□ -0.98
RNU6-1028P-201ENST00000517164 CRTC2Q53ET0 693 aaPredicted RBP8.91□□□□□ -0.98
RNU6-1028P-201ENST00000517164 CC2D2BQ6DHV5 1058 aa8.91□□□□□ -0.98
RNU6-1028P-201ENST00000517164 ATG7O95352 703 aa8.9□□□□□ -0.98
RNU6-1028P-201ENST00000517164 MYCP01106 439 aaPredicted RBP8.9□□□□□ -0.98
RNU6-1028P-201ENST00000517164 RASA1P20936 1047 aa8.9□□□□□ -0.98
RNU6-1028P-201ENST00000517164 GTF2IP78347 998 aa8.9□□□□□ -0.98
RNU6-1028P-201ENST00000517164 MYT1Q01538 1121 aa8.9□□□□□ -0.98
RNU6-1028P-201ENST00000517164 HOMEZQ8IX15 550 aa8.9□□□□□ -0.98
RNU6-1028P-201ENST00000517164 OGFOD1Q8N543 542 aa8.9□□□□□ -0.98
RNU6-1028P-201ENST00000517164 HPS1Q92902 700 aa8.9□□□□□ -0.98
RNU6-1028P-201ENST00000517164 ITPKCQ96DU7 683 aa8.9□□□□□ -0.98
RNU6-1028P-201ENST00000517164 SIRT1Q96EB6 747 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms