RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 RIPK4P57078 832 aa7.09□□□□□ -1.27
SCARNA20.4-201ENST00000516969 NFE2L2Q16236 605 aa7.09□□□□□ -1.27
SCARNA20.4-201ENST00000516969 HSP90AB2PQ58FF8 381 aa7.09□□□□□ -1.27
SCARNA20.4-201ENST00000516969 LTN1O94822 1766 aa7.09□□□□□ -1.27
SCARNA20.4-201ENST00000516969 PHRF1Q9P1Y6 1649 aaKnown RBP7.09□□□□□ -1.28
SCARNA20.4-201ENST00000516969 NFAT5O94916 1531 aa7.08□□□□□ -1.28
SCARNA20.4-201ENST00000516969 FOXO3O43524 673 aa7.08□□□□□ -1.28
SCARNA20.4-201ENST00000516969 PAK3O75914 559 aaPredicted RBP7.08□□□□□ -1.28
SCARNA20.4-201ENST00000516969 HMOX1P09601 288 aa7.08□□□□□ -1.28
SCARNA20.4-201ENST00000516969 ATF3P18847 181 aa7.08□□□□□ -1.28
SCARNA20.4-201ENST00000516969 MYH16Q9H6N6 1097 aa7.08□□□□□ -1.28
SCARNA20.4-201ENST00000516969 ALS2Q96Q42 1657 aa7.08□□□□□ -1.28
SCARNA20.4-201ENST00000516969 ARHGEF10O15013 1369 aa7.08□□□□□ -1.28
SCARNA20.4-201ENST00000516969 PLIN1O60240 522 aa7.07□□□□□ -1.28
SCARNA20.4-201ENST00000516969 NEFMP07197 916 aa7.07□□□□□ -1.28
SCARNA20.4-201ENST00000516969 CT47B1P0C2W7 299 aaPredicted RBP7.07□□□□□ -1.28
SCARNA20.4-201ENST00000516969 HOXC9P31274 260 aa7.07□□□□□ -1.28
SCARNA20.4-201ENST00000516969 AMPHP49418 695 aa7.07□□□□□ -1.28
SCARNA20.4-201ENST00000516969 NUTM2GQ5VZR2 741 aa7.07□□□□□ -1.28
SCARNA20.4-201ENST00000516969 KRT28Q7Z3Y7 464 aa7.07□□□□□ -1.28
SCARNA20.4-201ENST00000516969 CADPS2Q86UW7 1296 aa7.07□□□□□ -1.28
SCARNA20.4-201ENST00000516969 RTL1A6NKG5 1358 aa7.07□□□□□ -1.28
SCARNA20.4-201ENST00000516969 KDRP35968 1356 aa7.07□□□□□ -1.28
SCARNA20.4-201ENST00000516969 SLIT3O75094 1523 aa7.06□□□□□ -1.28
SCARNA20.4-201ENST00000516969 USP19O94966 1318 aa7.06□□□□□ -1.28
SCARNA20.4-201ENST00000516969 IGSF1Q8N6C5 1336 aa7.06□□□□□ -1.28
SCARNA20.4-201ENST00000516969 SOX12O15370 315 aa7.06□□□□□ -1.28
SCARNA20.4-201ENST00000516969 ZNF853P0CG23 659 aa7.06□□□□□ -1.28
SCARNA20.4-201ENST00000516969 RARSP54136 660 aaKnown RBP7.06□□□□□ -1.28
SCARNA20.4-201ENST00000516969 SULT6B1Q6IMI4 303 aa7.06□□□□□ -1.28
SCARNA20.4-201ENST00000516969 AEBP1Q8IUX7 1158 aa7.06□□□□□ -1.28
SCARNA20.4-201ENST00000516969 KCNH5Q8NCM2 988 aa7.06□□□□□ -1.28
SCARNA20.4-201ENST00000516969 EXOC6Q8TAG9 804 aa7.06□□□□□ -1.28
SCARNA20.4-201ENST00000516969 IP6K1Q92551 441 aa7.06□□□□□ -1.28
SCARNA20.4-201ENST00000516969 EYA1Q99502 592 aa7.06□□□□□ -1.28
SCARNA20.4-201ENST00000516969 MSH6P52701 1360 aa7.06□□□□□ -1.28
SCARNA20.4-201ENST00000516969 FANCIQ9NVI1 1328 aa7.05□□□□□ -1.28
SCARNA20.4-201ENST00000516969 BCAR3O75815 825 aa7.05□□□□□ -1.28
SCARNA20.4-201ENST00000516969 LMOD3Q0VAK6 560 aa7.05□□□□□ -1.28
SCARNA20.4-201ENST00000516969 C20orf194Q5TEA3 1177 aa7.05□□□□□ -1.28
SCARNA20.4-201ENST00000516969 B4GALNT3Q6L9W6 998 aa7.05□□□□□ -1.28
SCARNA20.4-201ENST00000516969 ARHGEF25Q86VW2 580 aa7.05□□□□□ -1.28
SCARNA20.4-201ENST00000516969 PELP1Q8IZL8 1130 aaKnown RBP7.05□□□□□ -1.28
SCARNA20.4-201ENST00000516969 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.05□□□□□ -1.28
SCARNA20.4-201ENST00000516969 RGPD2P0DJD1 1756 aa7.05□□□□□ -1.28
SCARNA20.4-201ENST00000516969 ZNF335Q9H4Z2 1342 aaPredicted RBP7.04□□□□□ -1.28
SCARNA20.4-201ENST00000516969 GCP02774 474 aa7.04□□□□□ -1.28
SCARNA20.4-201ENST00000516969 XPCQ01831 940 aaPredicted RBP7.04□□□□□ -1.28
SCARNA20.4-201ENST00000516969 CALD1Q05682 793 aaKnown RBP7.04□□□□□ -1.28
SCARNA20.4-201ENST00000516969 PDE3AQ14432 1141 aa7.04□□□□□ -1.28
SCARNA20.4-201ENST00000516969 TSR2Q969E8 191 aaKnown RBP7.04□□□□□ -1.28
SCARNA20.4-201ENST00000516969 CRBNQ96SW2 442 aa7.04□□□□□ -1.28
SCARNA20.4-201ENST00000516969 IFT57Q9NWB7 429 aa7.04□□□□□ -1.28
SCARNA20.4-201ENST00000516969 RGPD5Q99666 1765 aa7.04□□□□□ -1.28
SCARNA20.4-201ENST00000516969 PXDNQ92626 1479 aa7.04□□□□□ -1.28
SCARNA20.4-201ENST00000516969 NPHP3Q7Z494 1330 aa7.03□□□□□ -1.28
SCARNA20.4-201ENST00000516969 GNAI1P63096 354 aa7.03□□□□□ -1.28
SCARNA20.4-201ENST00000516969 EXOSC9Q06265 439 aaKnown RBP7.03□□□□□ -1.28
SCARNA20.4-201ENST00000516969 CFAP44Q96MT7 982 aa7.03□□□□□ -1.28
SCARNA20.4-201ENST00000516969 MED1Q15648 1581 aaPredicted RBP7.03□□□□□ -1.28
SCARNA20.4-201ENST00000516969 COL18A1P39060 1754 aa7.03□□□□□ -1.28
SCARNA20.4-201ENST00000516969 CRYBG1Q9Y4K1 1723 aa7.02□□□□□ -1.29
SCARNA20.4-201ENST00000516969 FAM83GA6ND36 823 aa7.02□□□□□ -1.29
SCARNA20.4-201ENST00000516969 HTATSF1O43719 755 aaKnown RBP7.02□□□□□ -1.29
SCARNA20.4-201ENST00000516969 BRPF1P55201 1214 aaPredicted RBP7.02□□□□□ -1.29
SCARNA20.4-201ENST00000516969 BRINP3Q76B58 766 aa7.02□□□□□ -1.29
SCARNA20.4-201ENST00000516969 ZNF428Q96B54 188 aa7.02□□□□□ -1.29
SCARNA20.4-201ENST00000516969 CCDC136Q96JN2 1154 aa7.02□□□□□ -1.29
SCARNA20.4-201ENST00000516969 THUMPD2Q9BTF0 503 aaKnown RBP7.02□□□□□ -1.29
SCARNA20.4-201ENST00000516969 SLAIN2Q9P270 581 aa7.02□□□□□ -1.29
SCARNA20.4-201ENST00000516969 CACNA1FO60840 1977 aa7.02□□□□□ -1.29
SCARNA20.4-201ENST00000516969 SPATA31A3Q5VYP0 1347 aa7.01□□□□□ -1.29
SCARNA20.4-201ENST00000516969 CRB1P82279 1406 aa7.01□□□□□ -1.29
SCARNA20.4-201ENST00000516969 NCAPD2Q15021 1401 aa7.01□□□□□ -1.29
SCARNA20.4-201ENST00000516969 CHL1O00533 1208 aa7.01□□□□□ -1.29
SCARNA20.4-201ENST00000516969 VAMP4O75379 141 aa7.01□□□□□ -1.29
SCARNA20.4-201ENST00000516969 MTHFSDQ2M296 383 aaKnown RBP7.01□□□□□ -1.29
SCARNA20.4-201ENST00000516969 NBPF6Q5VWK0 638 aa7.01□□□□□ -1.29
SCARNA20.4-201ENST00000516969 GAS2L2Q8NHY3 880 aa7.01□□□□□ -1.29
SCARNA20.4-201ENST00000516969 DDX17Q92841 729 aaKnown RBP7.01□□□□□ -1.29
SCARNA20.4-201ENST00000516969 NBPF4Q96M43 638 aa7.01□□□□□ -1.29
SCARNA20.4-201ENST00000516969 MBIPQ9NS73 344 aa7.01□□□□□ -1.29
SCARNA20.4-201ENST00000516969 VIRMAQ69YN4 1812 aaKnown RBP7.01□□□□□ -1.29
SCARNA20.4-201ENST00000516969 TNS3Q68CZ2 1445 aa7.01□□□□□ -1.29
SCARNA20.4-201ENST00000516969 SOS2Q07890 1332 aaPredicted RBP7.01□□□□□ -1.29
SCARNA20.4-201ENST00000516969 CAMTA1Q9Y6Y1 1673 aa7□□□□□ -1.29
SCARNA20.4-201ENST00000516969 DCTN1Q14203 1278 aa7□□□□□ -1.29
SCARNA20.4-201ENST00000516969 ALDH1L2Q3SY69 923 aa7□□□□□ -1.29
SCARNA20.4-201ENST00000516969 LMOD2Q6P5Q4 547 aa7□□□□□ -1.29
SCARNA20.4-201ENST00000516969 SSH1Q8WYL5 1049 aa7□□□□□ -1.29
SCARNA20.4-201ENST00000516969 LTV1Q96GA3 475 aaPredicted RBP7□□□□□ -1.29
SCARNA20.4-201ENST00000516969 AXIN2Q9Y2T1 843 aa7□□□□□ -1.29
SCARNA20.4-201ENST00000516969 RLBP1P12271 317 aa6.99□□□□□ -1.29
SCARNA20.4-201ENST00000516969 AAMPQ13685 434 aa6.99□□□□□ -1.29
SCARNA20.4-201ENST00000516969 MCM10Q7L590 875 aa6.99□□□□□ -1.29
SCARNA20.4-201ENST00000516969 TSPYL6Q8N831 410 aa6.99□□□□□ -1.29
SCARNA20.4-201ENST00000516969 C8orf58Q8NAV2 365 aa6.99□□□□□ -1.29
SCARNA20.4-201ENST00000516969 TSHZ2Q9NRE2 1034 aa6.99□□□□□ -1.29
SCARNA20.4-201ENST00000516969 LAS1LQ9Y4W2 734 aaKnown RBP6.99□□□□□ -1.29
SCARNA20.4-201ENST00000516969 ABCC6O95255 1503 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms