RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 EDARADDQ8WWZ3 215 aa2.79□□□□□ -1.96
RNU6-539P-201ENST00000516665 AVENQ9NQS1 362 aaPredicted RBP2.79□□□□□ -1.96
RNU6-539P-201ENST00000516665 PIK3R2O00459 728 aa2.78□□□□□ -1.96
RNU6-539P-201ENST00000516665 MX2P20592 715 aa2.78□□□□□ -1.96
RNU6-539P-201ENST00000516665 CSRNP1Q96S65 589 aa2.78□□□□□ -1.96
RNU6-539P-201ENST00000516665 DGKGP49619 791 aa2.77□□□□□ -1.97
RNU6-539P-201ENST00000516665 GP2P55259 537 aaKnown RBP2.77□□□□□ -1.97
RNU6-539P-201ENST00000516665 POU5F2Q8N7G0 328 aa2.77□□□□□ -1.97
RNU6-539P-201ENST00000516665 WDR26Q9H7D7 661 aa2.77□□□□□ -1.97
RNU6-539P-201ENST00000516665 SPATA31C1P0DKV0 1188 aa2.76□□□□□ -1.97
RNU6-539P-201ENST00000516665 SSTR4P31391 388 aa2.76□□□□□ -1.97
RNU6-539P-201ENST00000516665 LINC01559Q495D7 138 aa2.76□□□□□ -1.97
RNU6-539P-201ENST00000516665 GRXCR2A6NFK2 248 aa2.75□□□□□ -1.97
RNU6-539P-201ENST00000516665 SPINT1O43278 529 aa2.75□□□□□ -1.97
RNU6-539P-201ENST00000516665 RBM46Q8TBY0 533 aaKnown RBP2.75□□□□□ -1.97
RNU6-539P-201ENST00000516665 GTPBP3Q969Y2 492 aaKnown RBP2.75□□□□□ -1.97
RNU6-539P-201ENST00000516665 VARSP26640 1264 aaKnown RBP2.74□□□□□ -1.97
RNU6-539P-201ENST00000516665 CTSOP43234 321 aaPredicted RBP2.74□□□□□ -1.97
RNU6-539P-201ENST00000516665 CAMK2BQ13554 666 aa2.74□□□□□ -1.97
RNU6-539P-201ENST00000516665 PDIA6Q15084 440 aa2.74□□□□□ -1.97
RNU6-539P-201ENST00000516665 FAM161AQ3B820 660 aa2.74□□□□□ -1.97
RNU6-539P-201ENST00000516665 FOXR1Q6PIV2 292 aa2.74□□□□□ -1.97
RNU6-539P-201ENST00000516665 NSFL1CQ9UNZ2 370 aaKnown RBP2.74□□□□□ -1.97
RNU6-539P-201ENST00000516665 COL9A3Q14050 684 aaPredicted RBP2.73□□□□□ -1.97
RNU6-539P-201ENST00000516665 ARID5BQ14865 1188 aa2.73□□□□□ -1.97
RNU6-539P-201ENST00000516665 TRIM11Q96F44 468 aa2.73□□□□□ -1.97
RNU6-539P-201ENST00000516665 USB1Q9BQ65 265 aaKnown RBP2.73□□□□□ -1.97
RNU6-539P-201ENST00000516665 ADGRG1Q9Y653 693 aa2.73□□□□□ -1.97
RNU6-539P-201ENST00000516665 SPTLC1O15269 473 aa2.72□□□□□ -1.97
RNU6-539P-201ENST00000516665 MAP2K3P46734 347 aa2.72□□□□□ -1.97
RNU6-539P-201ENST00000516665 RGS19P49795 217 aa2.72□□□□□ -1.97
RNU6-539P-201ENST00000516665 ZNF124Q15973 351 aa2.72□□□□□ -1.97
RNU6-539P-201ENST00000516665 DBN1Q16643 649 aa2.72□□□□□ -1.97
RNU6-539P-201ENST00000516665 TRIM22Q8IYM9 498 aa2.72□□□□□ -1.97
RNU6-539P-201ENST00000516665 KLRG1Q96E93 195 aa2.72□□□□□ -1.97
RNU6-539P-201ENST00000516665 DBX1A6NMT0 343 aa2.71□□□□□ -1.98
RNU6-539P-201ENST00000516665 RNF217Q8TC41 542 aa2.71□□□□□ -1.98
RNU6-539P-201ENST00000516665 BAP1Q92560 729 aa2.71□□□□□ -1.98
RNU6-539P-201ENST00000516665 CDK15Q96Q40 435 aa2.71□□□□□ -1.98
RNU6-539P-201ENST00000516665 GRM5P41594 1212 aa2.7□□□□□ -1.98
RNU6-539P-201ENST00000516665 CD97P48960 835 aa2.7□□□□□ -1.98
RNU6-539P-201ENST00000516665 NR5A1Q13285 461 aa2.7□□□□□ -1.98
RNU6-539P-201ENST00000516665 RSPH4AQ5TD94 716 aa2.7□□□□□ -1.98
RNU6-539P-201ENST00000516665 BTBD6Q96KE9 485 aa2.7□□□□□ -1.98
RNU6-539P-201ENST00000516665 TRERF1Q96PN7 1200 aa2.7□□□□□ -1.98
RNU6-539P-201ENST00000516665 PLVAPQ9BX97 442 aa2.7□□□□□ -1.98
RNU6-539P-201ENST00000516665 GDF2Q9UK05 429 aaPredicted RBP2.7□□□□□ -1.98
RNU6-539P-201ENST00000516665 FCHSD2O94868 740 aa2.69□□□□□ -1.98
RNU6-539P-201ENST00000516665 APBA3O96018 575 aa2.69□□□□□ -1.98
RNU6-539P-201ENST00000516665 RDH13Q8NBN7 331 aa2.69□□□□□ -1.98
RNU6-539P-201ENST00000516665 INSM2Q96T92 566 aaPredicted RBP2.69□□□□□ -1.98
RNU6-539P-201ENST00000516665 NUDT12Q9BQG2 462 aa2.69□□□□□ -1.98
RNU6-539P-201ENST00000516665 ADAMTS4O75173 837 aa2.68□□□□□ -1.98
RNU6-539P-201ENST00000516665 CBLBQ13191 982 aa2.68□□□□□ -1.98
RNU6-539P-201ENST00000516665 Q3C1V9 767 aa2.68□□□□□ -1.98
RNU6-539P-201ENST00000516665 ZNF511Q8NB15 262 aa2.68□□□□□ -1.98
RNU6-539P-201ENST00000516665 GMCL1Q96IK5 515 aa2.68□□□□□ -1.98
RNU6-539P-201ENST00000516665 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP2.67□□□□□ -1.98
RNU6-539P-201ENST00000516665 RGL2O15211 777 aa2.67□□□□□ -1.98
RNU6-539P-201ENST00000516665 MED26O95402 600 aa2.67□□□□□ -1.98
RNU6-539P-201ENST00000516665 ZNF648Q5T619 568 aaPredicted RBP2.67□□□□□ -1.98
RNU6-539P-201ENST00000516665 RIPOR1Q6ZS17 1223 aa2.67□□□□□ -1.98
RNU6-539P-201ENST00000516665 GOLGA6L1Q8N7Z2 621 aa2.67□□□□□ -1.98
RNU6-539P-201ENST00000516665 FAM174AQ8TBP5 190 aa2.67□□□□□ -1.98
RNU6-539P-201ENST00000516665 POLMQ9NP87 494 aaPredicted RBP2.67□□□□□ -1.98
RNU6-539P-201ENST00000516665 JUNDP17535 347 aa2.66□□□□□ -1.98
RNU6-539P-201ENST00000516665 SLCO4C1Q6ZQN7 724 aa2.66□□□□□ -1.98
RNU6-539P-201ENST00000516665 MICALL1Q8N3F8 863 aa2.66□□□□□ -1.98
RNU6-539P-201ENST00000516665 TP53INP1Q96A56 240 aa2.66□□□□□ -1.98
RNU6-539P-201ENST00000516665 UNC93B1Q9H1C4 597 aa2.66□□□□□ -1.98
RNU6-539P-201ENST00000516665 ADGRE2Q9UHX3 823 aa2.66□□□□□ -1.98
RNU6-539P-201ENST00000516665 FAM229AH3BQW9 127 aa2.65□□□□□ -1.99
RNU6-539P-201ENST00000516665 PRPF38BQ5VTL8 546 aaKnown RBP2.65□□□□□ -1.99
RNU6-539P-201ENST00000516665 GGA1Q9UJY5 639 aa2.65□□□□□ -1.99
RNU6-539P-201ENST00000516665 EPXP11678 715 aa2.64□□□□□ -1.99
RNU6-539P-201ENST00000516665 FSHRP23945 695 aa2.64□□□□□ -1.99
RNU6-539P-201ENST00000516665 GCGRP47871 477 aa2.64□□□□□ -1.99
RNU6-539P-201ENST00000516665 CHSY3Q70JA7 882 aa2.64□□□□□ -1.99
RNU6-539P-201ENST00000516665 AGBL1Q96MI9 1066 aa2.64□□□□□ -1.99
RNU6-539P-201ENST00000516665 KIAA1324LA8MWY0 1029 aaPredicted RBP2.63□□□□□ -1.99
RNU6-539P-201ENST00000516665 RHOQP17081 205 aa2.63□□□□□ -1.99
RNU6-539P-201ENST00000516665 NKX1-1Q15270 411 aaPredicted RBP2.63□□□□□ -1.99
RNU6-539P-201ENST00000516665 FOXD4L5Q5VV16 416 aaPredicted RBP2.63□□□□□ -1.99
RNU6-539P-201ENST00000516665 Q6ZVU0 165 aa2.63□□□□□ -1.99
RNU6-539P-201ENST00000516665 SPDYE16A6NNV3 312 aaPredicted RBP2.62□□□□□ -1.99
RNU6-539P-201ENST00000516665 GRIK4Q16099 956 aa2.62□□□□□ -1.99
RNU6-539P-201ENST00000516665 PRRT3Q5FWE3 981 aa2.62□□□□□ -1.99
RNU6-539P-201ENST00000516665 DDX11L8A8MPP1 907 aa2.61□□□□□ -1.99
RNU6-539P-201ENST00000516665 ECM2O94769 699 aaPredicted RBP2.61□□□□□ -1.99
RNU6-539P-201ENST00000516665 RELBQ01201 579 aa2.61□□□□□ -1.99
RNU6-539P-201ENST00000516665 MBTPS1Q14703 1052 aa2.61□□□□□ -1.99
RNU6-539P-201ENST00000516665 RNF135Q8IUD6 432 aa2.61□□□□□ -1.99
RNU6-539P-201ENST00000516665 EMILIN1Q9Y6C2 1016 aa2.61□□□□□ -1.99
RNU6-539P-201ENST00000516665 OVOL3O00110 214 aa2.6□□□□□ -1.99
RNU6-539P-201ENST00000516665 C2CD2LO14523 706 aa2.6□□□□□ -1.99
RNU6-539P-201ENST00000516665 SUV39H1O43463 412 aa2.6□□□□□ -1.99
RNU6-539P-201ENST00000516665 ADGRE1Q14246 886 aa2.6□□□□□ -1.99
RNU6-539P-201ENST00000516665 FOXJ1Q92949 421 aa2.6□□□□□ -1.99
RNU6-539P-201ENST00000516665 NACC1Q96RE7 527 aa2.6□□□□□ -1.99
RNU6-539P-201ENST00000516665 ZNF395Q9H8N7 513 aaPredicted RBP2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms