RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 EVA1BQ9NVM1 165 aa5.3□□□□□ -1.56
SCARNA15.2-201ENST00000516409 DNAAF2Q9NVR5 837 aaKnown RBP5.3□□□□□ -1.56
SCARNA15.2-201ENST00000516409 BIN2Q9UBW5 565 aaPredicted RBP5.3□□□□□ -1.56
SCARNA15.2-201ENST00000516409 KIAA1024Q9UPX6 916 aa5.3□□□□□ -1.56
SCARNA15.2-201ENST00000516409 FAM205CA6NFA0 338 aa5.29□□□□□ -1.56
SCARNA15.2-201ENST00000516409 PRMT3O60678 531 aa5.29□□□□□ -1.56
SCARNA15.2-201ENST00000516409 MARSP56192 900 aaKnown RBP5.29□□□□□ -1.56
SCARNA15.2-201ENST00000516409 MCCD1P59942 119 aaPredicted RBP5.29□□□□□ -1.56
SCARNA15.2-201ENST00000516409 MSS51Q4VC12 460 aa5.29□□□□□ -1.56
SCARNA15.2-201ENST00000516409 NBPF14Q5TI25 921 aa5.29□□□□□ -1.56
SCARNA15.2-201ENST00000516409 ADGRD1Q6QNK2 874 aa5.29□□□□□ -1.56
SCARNA15.2-201ENST00000516409 FAM160A2Q8N612 972 aaPredicted RBP5.29□□□□□ -1.56
SCARNA15.2-201ENST00000516409 ARMC2Q8NEN0 867 aa5.29□□□□□ -1.56
SCARNA15.2-201ENST00000516409 ANKK1Q8NFD2 765 aa5.29□□□□□ -1.56
SCARNA15.2-201ENST00000516409 ZNF592Q92610 1267 aa5.29□□□□□ -1.56
SCARNA15.2-201ENST00000516409 GPKOWQ92917 476 aaPredicted RBP eCLIP5.29□□□□□ -1.56
SCARNA15.2-201ENST00000516409 MRRFQ96E11 262 aaKnown RBP5.29□□□□□ -1.56
SCARNA15.2-201ENST00000516409 CCDC85AQ96PX6 553 aaPredicted RBP5.29□□□□□ -1.56
SCARNA15.2-201ENST00000516409 KIAA1522Q9P206 1035 aaPredicted RBP5.29□□□□□ -1.56
SCARNA15.2-201ENST00000516409 CHIC2Q9UKJ5 165 aa5.29□□□□□ -1.56
SCARNA15.2-201ENST00000516409 SOWAHBA6NEL2 793 aa5.28□□□□□ -1.56
SCARNA15.2-201ENST00000516409 LZTS3O60299 673 aaPredicted RBP5.28□□□□□ -1.56
SCARNA15.2-201ENST00000516409 LGR5O75473 907 aa5.28□□□□□ -1.56
SCARNA15.2-201ENST00000516409 DKK1O94907 266 aa5.28□□□□□ -1.56
SCARNA15.2-201ENST00000516409 ZNF211Q13398 564 aaPredicted RBP5.28□□□□□ -1.56
SCARNA15.2-201ENST00000516409 SWI5Q1ZZU3 235 aa5.28□□□□□ -1.56
SCARNA15.2-201ENST00000516409 MAP7D1Q3KQU3 841 aa5.28□□□□□ -1.56
SCARNA15.2-201ENST00000516409 OXLD1Q5BKU9 147 aa5.28□□□□□ -1.56
SCARNA15.2-201ENST00000516409 ZBTB33Q86T24 672 aa5.28□□□□□ -1.56
SCARNA15.2-201ENST00000516409 TRIM50Q86XT4 487 aa5.28□□□□□ -1.56
SCARNA15.2-201ENST00000516409 DZIP3Q86Y13 1208 aaKnown RBP5.28□□□□□ -1.56
SCARNA15.2-201ENST00000516409 OTUD5Q96G74 571 aa5.28□□□□□ -1.56
SCARNA15.2-201ENST00000516409 PRIMPOLQ96LW4 560 aa5.28□□□□□ -1.56
SCARNA15.2-201ENST00000516409 CARD14Q9BXL6 1004 aa5.28□□□□□ -1.56
SCARNA15.2-201ENST00000516409 TSR3Q9UJK0 312 aaKnown RBP5.28□□□□□ -1.56
SCARNA15.2-201ENST00000516409 DOLKQ9UPQ8 538 aa5.28□□□□□ -1.56
SCARNA15.2-201ENST00000516409 NOD1Q9Y239 953 aa5.28□□□□□ -1.56
SCARNA15.2-201ENST00000516409 MAGEB6P1A0A0J9YX57 407 aa5.27□□□□□ -1.57
SCARNA15.2-201ENST00000516409 GOLGA8CPA6NN73 597 aa5.27□□□□□ -1.57
SCARNA15.2-201ENST00000516409 ZBTB7BO15156 539 aaPredicted RBP5.27□□□□□ -1.57
SCARNA15.2-201ENST00000516409 HRO43593 1189 aa5.27□□□□□ -1.57
SCARNA15.2-201ENST00000516409 ST18O60284 1047 aa5.27□□□□□ -1.57
SCARNA15.2-201ENST00000516409 ABL1P00519 1130 aa5.27□□□□□ -1.57
SCARNA15.2-201ENST00000516409 ZNF16P17020 682 aaPredicted RBP5.27□□□□□ -1.57
SCARNA15.2-201ENST00000516409 ERCC3P19447 782 aa5.27□□□□□ -1.57
SCARNA15.2-201ENST00000516409 ATP1A2P50993 1020 aa5.27□□□□□ -1.57
SCARNA15.2-201ENST00000516409 MMP16P51512 607 aa5.27□□□□□ -1.57
SCARNA15.2-201ENST00000516409 COPS2P61201 443 aa5.27□□□□□ -1.57
SCARNA15.2-201ENST00000516409 GTF2IP78347 998 aa5.27□□□□□ -1.57
SCARNA15.2-201ENST00000516409 PTCRAQ6ISU1 281 aaPredicted RBP5.27□□□□□ -1.57
SCARNA15.2-201ENST00000516409 SH3BP5LQ7L8J4 393 aa5.27□□□□□ -1.57
SCARNA15.2-201ENST00000516409 SPSB2Q99619 263 aa5.27□□□□□ -1.57
SCARNA15.2-201ENST00000516409 BCL2L13Q9BXK5 485 aa5.27□□□□□ -1.57
SCARNA15.2-201ENST00000516409 UNC93B1Q9H1C4 597 aa5.27□□□□□ -1.57
SCARNA15.2-201ENST00000516409 ANO2Q9NQ90 1003 aa5.27□□□□□ -1.57
SCARNA15.2-201ENST00000516409 USP35Q9P2H5 1018 aa5.27□□□□□ -1.57
SCARNA15.2-201ENST00000516409 POTEB3A0JP26 581 aa5.26□□□□□ -1.57
SCARNA15.2-201ENST00000516409 SFI1A8K8P3 1242 aa5.26□□□□□ -1.57
SCARNA15.2-201ENST00000516409 TLL1O43897 1013 aa5.26□□□□□ -1.57
SCARNA15.2-201ENST00000516409 LSM11P83369 360 aaKnown RBP eCLIP5.26□□□□□ -1.57
SCARNA15.2-201ENST00000516409 POTEBQ6S5H4 581 aa5.26□□□□□ -1.57
SCARNA15.2-201ENST00000516409 SIX5Q8N196 739 aa5.26□□□□□ -1.57
SCARNA15.2-201ENST00000516409 LARGE2Q8N3Y3 721 aa5.26□□□□□ -1.57
SCARNA15.2-201ENST00000516409 CCDC24Q8N4L8 307 aa5.26□□□□□ -1.57
SCARNA15.2-201ENST00000516409 GIPC2Q8TF65 315 aa5.26□□□□□ -1.57
SCARNA15.2-201ENST00000516409 IGSF5Q9NSI5 407 aa5.26□□□□□ -1.57
SCARNA15.2-201ENST00000516409 CXXC1Q9P0U4 656 aaPredicted RBP5.26□□□□□ -1.57
SCARNA15.2-201ENST00000516409 ANKRD33BA6NCL7 494 aa5.25□□□□□ -1.57
SCARNA15.2-201ENST00000516409 H3BRB1 525 aa5.25□□□□□ -1.57
SCARNA15.2-201ENST00000516409 GIGYF1O75420 1035 aaPredicted RBP5.25□□□□□ -1.57
SCARNA15.2-201ENST00000516409 SEC13P55735 322 aa5.25□□□□□ -1.57
SCARNA15.2-201ENST00000516409 PSME1Q06323 249 aa5.25□□□□□ -1.57
SCARNA15.2-201ENST00000516409 OCLNQ16625 522 aa5.25□□□□□ -1.57
SCARNA15.2-201ENST00000516409 CCDC102BQ68D86 513 aa5.25□□□□□ -1.57
SCARNA15.2-201ENST00000516409 NPAS4Q8IUM7 802 aa5.25□□□□□ -1.57
SCARNA15.2-201ENST00000516409 TPCN2Q8NHX9 752 aa5.25□□□□□ -1.57
SCARNA15.2-201ENST00000516409 C1orf216Q8TAB5 229 aa5.25□□□□□ -1.57
SCARNA15.2-201ENST00000516409 WNT2BQ93097 391 aa5.25□□□□□ -1.57
SCARNA15.2-201ENST00000516409 TUT1Q9H6E5 874 aaKnown RBP5.25□□□□□ -1.57
SCARNA15.2-201ENST00000516409 LINC01559Q495D7 138 aa5.24□□□□□ -1.57
SCARNA15.2-201ENST00000516409 TAS1R3Q7RTX0 852 aa5.24□□□□□ -1.57
SCARNA15.2-201ENST00000516409 SIRT1Q96EB6 747 aa5.24□□□□□ -1.57
SCARNA15.2-201ENST00000516409 STAC3Q96MF2 364 aa5.24□□□□□ -1.57
SCARNA15.2-201ENST00000516409 HS3ST6Q96QI5 342 aa5.24□□□□□ -1.57
SCARNA15.2-201ENST00000516409 MKNK1Q9BUB5 465 aa5.24□□□□□ -1.57
SCARNA15.2-201ENST00000516409 WBP1LQ9NX94 342 aa5.24□□□□□ -1.57
SCARNA15.2-201ENST00000516409 ERFEQ4G0M1 354 aa5.23□□□□□ -1.57
SCARNA15.2-201ENST00000516409 SH3RF1Q7Z6J0 888 aa5.23□□□□□ -1.57
SCARNA15.2-201ENST00000516409 GLYCTKQ8IVS8 523 aa5.23□□□□□ -1.57
SCARNA15.2-201ENST00000516409 FOXJ1Q92949 421 aa5.23□□□□□ -1.57
SCARNA15.2-201ENST00000516409 SEPT3Q9UH03 358 aa5.23□□□□□ -1.57
SCARNA15.2-201ENST00000516409 RBM19Q9Y4C8 960 aaKnown RBP5.23□□□□□ -1.57
SCARNA15.2-201ENST00000516409 SHROOM4Q9ULL8 1493 aa5.22□□□□□ -1.57
SCARNA15.2-201ENST00000516409 ICMTO60725 284 aa5.22□□□□□ -1.57
SCARNA15.2-201ENST00000516409 TAGLNQ01995 201 aaKnown RBP5.22□□□□□ -1.57
SCARNA15.2-201ENST00000516409 MTMR3Q13615 1198 aa5.22□□□□□ -1.57
SCARNA15.2-201ENST00000516409 AGERQ15109 404 aa5.22□□□□□ -1.57
SCARNA15.2-201ENST00000516409 CAPN12Q6ZSI9 719 aa5.22□□□□□ -1.57
SCARNA15.2-201ENST00000516409 ANKRD13DQ6ZTN6 518 aa5.22□□□□□ -1.57
SCARNA15.2-201ENST00000516409 GAS2L2Q8NHY3 880 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms