RNA–Protein interactions for RNA: ENST00000516400.1

RNU1-48P-201, Transcript of RNA, U1 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU1-48P, Length 162 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-48P-201ENST00000516400 KIF15Q9NS87 1388 aa4□□□□□ -1.77
RNU1-48P-201ENST00000516400 N4BP2Q86UW6 1770 aaPredicted RBP3.99□□□□□ -1.77
RNU1-48P-201ENST00000516400 CLTCL1P53675 1640 aa3.99□□□□□ -1.77
RNU1-48P-201ENST00000516400 PNPLA7Q6ZV29 1317 aa3.99□□□□□ -1.77
RNU1-48P-201ENST00000516400 LAMA3Q16787 3333 aa3.99□□□□□ -1.77
RNU1-48P-201ENST00000516400 NAIPQ13075 1403 aa3.99□□□□□ -1.77
RNU1-48P-201ENST00000516400 A0A0G2JS52 829 aa3.99□□□□□ -1.77
RNU1-48P-201ENST00000516400 MYT1Q01538 1121 aa3.99□□□□□ -1.77
RNU1-48P-201ENST00000516400 CASP8AP2Q9UKL3 1982 aa3.99□□□□□ -1.77
RNU1-48P-201ENST00000516400 RGPD5Q99666 1765 aa3.99□□□□□ -1.77
RNU1-48P-201ENST00000516400 PITPNM2Q9BZ72 1349 aa3.98□□□□□ -1.77
RNU1-48P-201ENST00000516400 TAF1LQ8IZX4 1826 aa3.98□□□□□ -1.77
RNU1-48P-201ENST00000516400 HTTP42858 3142 aa3.98□□□□□ -1.77
RNU1-48P-201ENST00000516400 OVOS2A0A0G2JMS6 1433 aa3.98□□□□□ -1.77
RNU1-48P-201ENST00000516400 OVOS2A0A0J9YW53 1432 aa3.98□□□□□ -1.77
RNU1-48P-201ENST00000516400 OVOS2Q6IE36 1432 aa3.98□□□□□ -1.77
RNU1-48P-201ENST00000516400 SSH2Q76I76 1423 aa3.98□□□□□ -1.77
RNU1-48P-201ENST00000516400 PDE3BQ13370 1112 aa3.98□□□□□ -1.77
RNU1-48P-201ENST00000516400 MARCH10Q8NA82 808 aaPredicted RBP3.98□□□□□ -1.77
RNU1-48P-201ENST00000516400 STK32BQ9NY57 414 aa3.98□□□□□ -1.77
RNU1-48P-201ENST00000516400 MEGF6O75095 1541 aa3.98□□□□□ -1.77
RNU1-48P-201ENST00000516400 PPLO60437 1756 aa3.98□□□□□ -1.77
RNU1-48P-201ENST00000516400 ARHGEF10O15013 1369 aa3.98□□□□□ -1.77
RNU1-48P-201ENST00000516400 THSD7BQ9C0I4 1608 aa3.97□□□□□ -1.77
RNU1-48P-201ENST00000516400 C11orf95C9JLR9 678 aaPredicted RBP3.97□□□□□ -1.77
RNU1-48P-201ENST00000516400 LARP1Q6PKG0 1096 aaKnown RBP3.97□□□□□ -1.77
RNU1-48P-201ENST00000516400 PELP1Q8IZL8 1130 aaKnown RBP3.97□□□□□ -1.77
RNU1-48P-201ENST00000516400 RRP7BPQ9NSQ0 103 aa3.97□□□□□ -1.77
RNU1-48P-201ENST00000516400 WBP1LQ9NX94 342 aa3.97□□□□□ -1.77
RNU1-48P-201ENST00000516400 CD2APQ9Y5K6 639 aa3.97□□□□□ -1.77
RNU1-48P-201ENST00000516400 TOGARAM1Q9Y4F4 1720 aa3.97□□□□□ -1.77
RNU1-48P-201ENST00000516400 KANK1Q14678 1352 aa3.97□□□□□ -1.77
RNU1-48P-201ENST00000516400 KIAA0232Q92628 1395 aa3.97□□□□□ -1.77
RNU1-48P-201ENST00000516400 PLEKHH1Q9ULM0 1364 aa3.97□□□□□ -1.77
RNU1-48P-201ENST00000516400 PRUNE2Q8WUY3 3088 aa3.97□□□□□ -1.77
RNU1-48P-201ENST00000516400 LAMA2P24043 3122 aaKnown RBP3.96□□□□□ -1.78
RNU1-48P-201ENST00000516400 NUTM2FA1L443 756 aa3.96□□□□□ -1.78
RNU1-48P-201ENST00000516400 POTECB2RU33 542 aa3.96□□□□□ -1.78
RNU1-48P-201ENST00000516400 TCP11L2Q8N4U5 519 aa3.96□□□□□ -1.78
RNU1-48P-201ENST00000516400 RNF39Q9H2S5 420 aa3.96□□□□□ -1.78
RNU1-48P-201ENST00000516400 THRAP3Q9Y2W1 955 aaKnown RBP3.96□□□□□ -1.78
RNU1-48P-201ENST00000516400 MYOM3Q5VTT5 1437 aa3.95□□□□□ -1.78
RNU1-48P-201ENST00000516400 TRPM1Q7Z4N2 1603 aa3.95□□□□□ -1.78
RNU1-48P-201ENST00000516400 KIF1BO60333 1816 aa3.95□□□□□ -1.78
RNU1-48P-201ENST00000516400 KAT6BQ8WYB5 2073 aa3.95□□□□□ -1.78
RNU1-48P-201ENST00000516400 DLL1O00548 723 aa3.95□□□□□ -1.78
RNU1-48P-201ENST00000516400 HSPA8P11142 646 aaKnown RBP3.95□□□□□ -1.78
RNU1-48P-201ENST00000516400 LBX1P52954 281 aa3.95□□□□□ -1.78
RNU1-48P-201ENST00000516400 PRPF38BQ5VTL8 546 aaKnown RBP3.95□□□□□ -1.78
RNU1-48P-201ENST00000516400 WAPLQ7Z5K2 1190 aa3.95□□□□□ -1.78
RNU1-48P-201ENST00000516400 PHF8Q9UPP1 1060 aa3.95□□□□□ -1.78
RNU1-48P-201ENST00000516400 LTBP1Q14766 1721 aa3.95□□□□□ -1.78
RNU1-48P-201ENST00000516400 KCPQ6ZWJ8 1503 aa3.95□□□□□ -1.78
RNU1-48P-201ENST00000516400 UBR3Q6ZT12 1888 aa3.94□□□□□ -1.78
RNU1-48P-201ENST00000516400 PIK3C2AO00443 1686 aa3.94□□□□□ -1.78
RNU1-48P-201ENST00000516400 COL5A2P05997 1499 aaPredicted RBP3.94□□□□□ -1.78
RNU1-48P-201ENST00000516400 BRD4O60885 1362 aaPredicted RBP3.94□□□□□ -1.78
RNU1-48P-201ENST00000516400 DICER1Q9UPY3 1922 aaKnown RBP3.94□□□□□ -1.78
RNU1-48P-201ENST00000516400 CTCFP49711 727 aaPredicted RBP3.94□□□□□ -1.78
RNU1-48P-201ENST00000516400 PSME1Q06323 249 aa3.94□□□□□ -1.78
RNU1-48P-201ENST00000516400 CHRNA2Q15822 529 aa3.94□□□□□ -1.78
RNU1-48P-201ENST00000516400 CPDO75976 1380 aa3.93□□□□□ -1.78
RNU1-48P-201ENST00000516400 CCDC85CA6NKD9 419 aa3.93□□□□□ -1.78
RNU1-48P-201ENST00000516400 FXR1P51114 621 aaKnown RBP eCLIP3.93□□□□□ -1.78
RNU1-48P-201ENST00000516400 COL23A1Q86Y22 540 aaPredicted RBP3.93□□□□□ -1.78
RNU1-48P-201ENST00000516400 RRAGCQ9HB90 399 aa3.93□□□□□ -1.78
RNU1-48P-201ENST00000516400 USP35Q9P2H5 1018 aa3.93□□□□□ -1.78
RNU1-48P-201ENST00000516400 DAPK1P53355 1430 aa3.93□□□□□ -1.78
RNU1-48P-201ENST00000516400 CNTNAP1P78357 1384 aa3.92□□□□□ -1.78
RNU1-48P-201ENST00000516400 ABCC11Q96J66 1382 aa3.92□□□□□ -1.78
RNU1-48P-201ENST00000516400 POLD1P28340 1107 aa3.92□□□□□ -1.78
RNU1-48P-201ENST00000516400 HABP4Q5JVS0 413 aaKnown RBP3.92□□□□□ -1.78
RNU1-48P-201ENST00000516400 PPP4R3CPQ6ZMV5 832 aa3.92□□□□□ -1.78
RNU1-48P-201ENST00000516400 SMC1BQ8NDV3 1235 aa3.92□□□□□ -1.78
RNU1-48P-201ENST00000516400 PMFBP1Q8TBY8 1022 aa3.92□□□□□ -1.78
RNU1-48P-201ENST00000516400 SIRT1Q96EB6 747 aa3.92□□□□□ -1.78
RNU1-48P-201ENST00000516400 STRN4Q9NRL3 753 aa3.92□□□□□ -1.78
RNU1-48P-201ENST00000516400 IGSF1Q8N6C5 1336 aa3.92□□□□□ -1.78
RNU1-48P-201ENST00000516400 PRR36Q9H6K5 1346 aa3.92□□□□□ -1.78
RNU1-48P-201ENST00000516400 ADAMTSL1Q8N6G6 1762 aa3.91□□□□□ -1.78
RNU1-48P-201ENST00000516400 KDM6AO15550 1401 aaPredicted RBP3.91□□□□□ -1.78
RNU1-48P-201ENST00000516400 PLEKHG5O94827 1062 aa3.91□□□□□ -1.78
RNU1-48P-201ENST00000516400 UBTFP17480 764 aaKnown RBP3.91□□□□□ -1.78
RNU1-48P-201ENST00000516400 KCNA3P22001 575 aa3.91□□□□□ -1.78
RNU1-48P-201ENST00000516400 VEGFBP49765 207 aa3.91□□□□□ -1.78
RNU1-48P-201ENST00000516400 HAP1P54257 671 aaPredicted RBP3.91□□□□□ -1.78
RNU1-48P-201ENST00000516400 CRB1P82279 1406 aa3.91□□□□□ -1.78
RNU1-48P-201ENST00000516400 KLHL34Q8N239 644 aa3.91□□□□□ -1.78
RNU1-48P-201ENST00000516400 VPS8Q8N3P4 1428 aa3.91□□□□□ -1.78
RNU1-48P-201ENST00000516400 CNKSR2Q8WXI2 1034 aa3.91□□□□□ -1.78
RNU1-48P-201ENST00000516400 PRDM11Q9NQV5 511 aa3.91□□□□□ -1.78
RNU1-48P-201ENST00000516400 CREBZFQ9NS37 354 aa3.91□□□□□ -1.78
RNU1-48P-201ENST00000516400 PASKQ96RG2 1323 aa3.91□□□□□ -1.78
RNU1-48P-201ENST00000516400 C5P01031 1676 aa3.9□□□□□ -1.78
RNU1-48P-201ENST00000516400 SPATA31E1Q6ZUB1 1445 aa3.9□□□□□ -1.78
RNU1-48P-201ENST00000516400 C1QBPQ07021 282 aaKnown RBP3.9□□□□□ -1.79
RNU1-48P-201ENST00000516400 DDB1Q16531 1140 aa3.9□□□□□ -1.79
RNU1-48P-201ENST00000516400 AMIGO3Q86WK7 504 aa3.9□□□□□ -1.79
RNU1-48P-201ENST00000516400 MKRN1Q9UHC7 482 aaKnown RBP3.9□□□□□ -1.79
RNU1-48P-201ENST00000516400 MAP2P11137 1827 aaKnown RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms