RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 PLEKHF1Q96S99 279 aa10.04□□□□□ -0.8
SCARNA20.1-201ENST00000516009 RSPH6AQ9H0K4 717 aa10.04□□□□□ -0.8
SCARNA20.1-201ENST00000516009 TNS3Q68CZ2 1445 aa10.04□□□□□ -0.8
SCARNA20.1-201ENST00000516009 USP19O94966 1318 aa10.04□□□□□ -0.8
SCARNA20.1-201ENST00000516009 HMOX1P09601 288 aa10.03□□□□□ -0.8
SCARNA20.1-201ENST00000516009 HOXC9P31274 260 aa10.03□□□□□ -0.8
SCARNA20.1-201ENST00000516009 PRKAR2BP31323 418 aa10.03□□□□□ -0.8
SCARNA20.1-201ENST00000516009 NEUROD2Q15784 382 aa10.03□□□□□ -0.8
SCARNA20.1-201ENST00000516009 CCDC27Q2M243 656 aa10.03□□□□□ -0.8
SCARNA20.1-201ENST00000516009 DDX17Q92841 729 aaKnown RBP10.03□□□□□ -0.8
SCARNA20.1-201ENST00000516009 RRP7AQ9Y3A4 280 aaKnown RBP10.03□□□□□ -0.8
SCARNA20.1-201ENST00000516009 SUPT16HQ9Y5B9 1047 aaKnown RBP10.03□□□□□ -0.8
SCARNA20.1-201ENST00000516009 DLG5Q8TDM6 1919 aa10.03□□□□□ -0.8
SCARNA20.1-201ENST00000516009 ARHGEF10O15013 1369 aa10.02□□□□□ -0.8
SCARNA20.1-201ENST00000516009 CRYBG1Q9Y4K1 1723 aa10.02□□□□□ -0.8
SCARNA20.1-201ENST00000516009 TMPOP42166 694 aaKnown RBP10.02□□□□□ -0.81
SCARNA20.1-201ENST00000516009 WWC1Q8IX03 1113 aa10.02□□□□□ -0.81
SCARNA20.1-201ENST00000516009 PHF23Q9BUL5 403 aaPredicted RBP10.02□□□□□ -0.81
SCARNA20.1-201ENST00000516009 MED1Q15648 1581 aaPredicted RBP10.01□□□□□ -0.81
SCARNA20.1-201ENST00000516009 E9PSI1 815 aa10.01□□□□□ -0.81
SCARNA20.1-201ENST00000516009 GCP02774 474 aa10.01□□□□□ -0.81
SCARNA20.1-201ENST00000516009 SLFN5Q08AF3 891 aa10.01□□□□□ -0.81
SCARNA20.1-201ENST00000516009 WDR63Q8IWG1 891 aa10.01□□□□□ -0.81
SCARNA20.1-201ENST00000516009 IP6K1Q92551 441 aa10.01□□□□□ -0.81
SCARNA20.1-201ENST00000516009 SPATA31A3Q5VYP0 1347 aa10.01□□□□□ -0.81
SCARNA20.1-201ENST00000516009 RGPD5Q99666 1765 aa10.01□□□□□ -0.81
SCARNA20.1-201ENST00000516009 ZBTB7CA1YPR0 619 aa10□□□□□ -0.81
SCARNA20.1-201ENST00000516009 PLEKHG5O94827 1062 aa10□□□□□ -0.81
SCARNA20.1-201ENST00000516009 SULT6B1Q6IMI4 303 aa10□□□□□ -0.81
SCARNA20.1-201ENST00000516009 ARHGEF25Q86VW2 580 aa10□□□□□ -0.81
SCARNA20.1-201ENST00000516009 RGPD2P0DJD1 1756 aa10□□□□□ -0.81
SCARNA20.1-201ENST00000516009 SOS2Q07890 1332 aaPredicted RBP10□□□□□ -0.81
SCARNA20.1-201ENST00000516009 ROBO1Q9Y6N7 1651 aa9.99□□□□□ -0.81
SCARNA20.1-201ENST00000516009 RIPK4P57078 832 aa9.99□□□□□ -0.81
SCARNA20.1-201ENST00000516009 FKBP8Q14318 412 aa9.99□□□□□ -0.81
SCARNA20.1-201ENST00000516009 NFE2L2Q16236 605 aa9.99□□□□□ -0.81
SCARNA20.1-201ENST00000516009 DUSP27Q5VZP5 1158 aa9.99□□□□□ -0.81
SCARNA20.1-201ENST00000516009 AEBP1Q8IUX7 1158 aa9.99□□□□□ -0.81
SCARNA20.1-201ENST00000516009 IGSF1Q8N6C5 1336 aa9.99□□□□□ -0.81
SCARNA20.1-201ENST00000516009 KDRP35968 1356 aa9.99□□□□□ -0.81
SCARNA20.1-201ENST00000516009 TRMT2AQ8IZ69 625 aaKnown RBP9.98□□□□□ -0.81
SCARNA20.1-201ENST00000516009 LTV1Q96GA3 475 aaPredicted RBP9.98□□□□□ -0.81
SCARNA20.1-201ENST00000516009 PHACTR3Q96KR7 559 aa9.98□□□□□ -0.81
SCARNA20.1-201ENST00000516009 RCAN3Q9UKA8 241 aa9.98□□□□□ -0.81
SCARNA20.1-201ENST00000516009 ABCA3Q99758 1704 aa9.98□□□□□ -0.81
SCARNA20.1-201ENST00000516009 ABCC6O95255 1503 aa9.97□□□□□ -0.81
SCARNA20.1-201ENST00000516009 COL18A1P39060 1754 aa9.97□□□□□ -0.81
SCARNA20.1-201ENST00000516009 LMOD3Q0VAK6 560 aa9.97□□□□□ -0.81
SCARNA20.1-201ENST00000516009 AEBP2Q6ZN18 517 aaPredicted RBP9.97□□□□□ -0.81
SCARNA20.1-201ENST00000516009 EYA1Q99502 592 aa9.97□□□□□ -0.81
SCARNA20.1-201ENST00000516009 SPINK5Q9NQ38 1064 aaPredicted RBP9.97□□□□□ -0.81
SCARNA20.1-201ENST00000516009 TRIM35Q9UPQ4 493 aa9.97□□□□□ -0.81
SCARNA20.1-201ENST00000516009 AHDC1Q5TGY3 1603 aaPredicted RBP9.96□□□□□ -0.81
SCARNA20.1-201ENST00000516009 FAM208AQ9UK61 1670 aaKnown RBP9.96□□□□□ -0.81
SCARNA20.1-201ENST00000516009 ZC3H6P61129 1189 aaKnown RBP9.96□□□□□ -0.82
SCARNA20.1-201ENST00000516009 MYH16Q9H6N6 1097 aa9.96□□□□□ -0.82
SCARNA20.1-201ENST00000516009 IL16Q14005 1332 aa9.96□□□□□ -0.82
SCARNA20.1-201ENST00000516009 RNF123Q5XPI4 1314 aa9.96□□□□□ -0.82
SCARNA20.1-201ENST00000516009 CALD1Q05682 793 aaKnown RBP9.95□□□□□ -0.82
SCARNA20.1-201ENST00000516009 CABLES1Q8TDN4 633 aa9.95□□□□□ -0.82
SCARNA20.1-201ENST00000516009 CAMTA1Q9Y6Y1 1673 aa9.95□□□□□ -0.82
SCARNA20.1-201ENST00000516009 CPDO75976 1380 aa9.94□□□□□ -0.82
SCARNA20.1-201ENST00000516009 IRX6P78412 446 aaPredicted RBP9.94□□□□□ -0.82
SCARNA20.1-201ENST00000516009 ANKRD24Q8TF21 1146 aa9.94□□□□□ -0.82
SCARNA20.1-201ENST00000516009 PHLPP1O60346 1717 aa9.93□□□□□ -0.82
SCARNA20.1-201ENST00000516009 KIAA0232Q92628 1395 aa9.93□□□□□ -0.82
SCARNA20.1-201ENST00000516009 HAP1P54257 671 aaPredicted RBP9.93□□□□□ -0.82
SCARNA20.1-201ENST00000516009 RRP1P56182 461 aaKnown RBP9.93□□□□□ -0.82
SCARNA20.1-201ENST00000516009 NBPF6Q5VWK0 638 aa9.93□□□□□ -0.82
SCARNA20.1-201ENST00000516009 ERICH6BQ5W0A0 696 aa9.93□□□□□ -0.82
SCARNA20.1-201ENST00000516009 GAS2L2Q8NHY3 880 aa9.93□□□□□ -0.82
SCARNA20.1-201ENST00000516009 NBPF4Q96M43 638 aa9.93□□□□□ -0.82
SCARNA20.1-201ENST00000516009 LMO7Q8WWI1 1683 aa9.93□□□□□ -0.82
SCARNA20.1-201ENST00000516009 FANCIQ9NVI1 1328 aa9.92□□□□□ -0.82
SCARNA20.1-201ENST00000516009 USHBP1Q8N6Y0 703 aa9.92□□□□□ -0.82
SCARNA20.1-201ENST00000516009 LRRC59Q96AG4 307 aaKnown RBP9.92□□□□□ -0.82
SCARNA20.1-201ENST00000516009 AXIN2Q9Y2T1 843 aa9.92□□□□□ -0.82
SCARNA20.1-201ENST00000516009 COL22A1Q8NFW1 1626 aaPredicted RBP9.92□□□□□ -0.82
SCARNA20.1-201ENST00000516009 NCAPD2Q15021 1401 aa9.91□□□□□ -0.82
SCARNA20.1-201ENST00000516009 VIRMAQ69YN4 1812 aaKnown RBP9.91□□□□□ -0.82
SCARNA20.1-201ENST00000516009 ERBB3P21860 1342 aa9.91□□□□□ -0.82
SCARNA20.1-201ENST00000516009 TOM1O60784 492 aa9.91□□□□□ -0.82
SCARNA20.1-201ENST00000516009 GNAI1P63096 354 aa9.91□□□□□ -0.82
SCARNA20.1-201ENST00000516009 MTHFSDQ2M296 383 aaKnown RBP9.91□□□□□ -0.82
SCARNA20.1-201ENST00000516009 COL16A1Q07092 1604 aaPredicted RBP9.9□□□□□ -0.82
SCARNA20.1-201ENST00000516009 CT47B1P0C2W7 299 aaPredicted RBP9.9□□□□□ -0.82
SCARNA20.1-201ENST00000516009 CHRNA2Q15822 529 aa9.9□□□□□ -0.82
SCARNA20.1-201ENST00000516009 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.9□□□□□ -0.82
SCARNA20.1-201ENST00000516009 RTF1Q92541 710 aaKnown RBP9.9□□□□□ -0.82
SCARNA20.1-201ENST00000516009 TSR2Q969E8 191 aaKnown RBP9.9□□□□□ -0.82
SCARNA20.1-201ENST00000516009 THUMPD2Q9BTF0 503 aaKnown RBP9.9□□□□□ -0.82
SCARNA20.1-201ENST00000516009 PRDM11Q9NQV5 511 aa9.9□□□□□ -0.82
SCARNA20.1-201ENST00000516009 IFT57Q9NWB7 429 aa9.9□□□□□ -0.82
SCARNA20.1-201ENST00000516009 LAS1LQ9Y4W2 734 aaKnown RBP9.9□□□□□ -0.82
SCARNA20.1-201ENST00000516009 LRRC37A3O60309 1634 aa9.89□□□□□ -0.83
SCARNA20.1-201ENST00000516009 FAM83GA6ND36 823 aa9.89□□□□□ -0.83
SCARNA20.1-201ENST00000516009 HTATSF1O43719 755 aaKnown RBP9.89□□□□□ -0.83
SCARNA20.1-201ENST00000516009 CSB-PGBD3P0DP91 1061 aa9.89□□□□□ -0.83
SCARNA20.1-201ENST00000516009 DCTN1Q14203 1278 aa9.89□□□□□ -0.83
SCARNA20.1-201ENST00000516009 MAP3K5Q99683 1374 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms