RNA–Protein interactions for RNA: ENST00000515996.1

SCARNA21.1-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21.1-201ENST00000515996 MX2P20592 715 aa1.85□□□□□ -2.11
SCARNA21.1-201ENST00000515996 SSTR4P31391 388 aa1.85□□□□□ -2.11
SCARNA21.1-201ENST00000515996 DGKGP49619 791 aa1.85□□□□□ -2.11
SCARNA21.1-201ENST00000515996 SH3BP2P78314 561 aa1.85□□□□□ -2.11
SCARNA21.1-201ENST00000515996 MPNDQ8N594 471 aa1.85□□□□□ -2.11
SCARNA21.1-201ENST00000515996 EDARADDQ8WWZ3 215 aa1.85□□□□□ -2.11
SCARNA21.1-201ENST00000515996 NSFL1CQ9UNZ2 370 aaKnown RBP1.85□□□□□ -2.11
SCARNA21.1-201ENST00000515996 NR3C2P08235 984 aa1.84□□□□□ -2.11
SCARNA21.1-201ENST00000515996 FUT2Q10981 343 aa1.84□□□□□ -2.11
SCARNA21.1-201ENST00000515996 MFSD10Q14728 455 aa1.84□□□□□ -2.11
SCARNA21.1-201ENST00000515996 FOXR1Q6PIV2 292 aa1.84□□□□□ -2.11
SCARNA21.1-201ENST00000515996 FCHSD2O94868 740 aa1.83□□□□□ -2.12
SCARNA21.1-201ENST00000515996 CD97P48960 835 aa1.83□□□□□ -2.12
SCARNA21.1-201ENST00000515996 IGHA2P01877 340 aa1.82□□□□□ -2.12
SCARNA21.1-201ENST00000515996 ATP6V1AP38606 617 aa1.82□□□□□ -2.12
SCARNA21.1-201ENST00000515996 MAP2K3P46734 347 aa1.82□□□□□ -2.12
SCARNA21.1-201ENST00000515996 ZNF124Q15973 351 aa1.82□□□□□ -2.12
SCARNA21.1-201ENST00000515996 GTPBP3Q969Y2 492 aaKnown RBP1.82□□□□□ -2.12
SCARNA21.1-201ENST00000515996 RCCD1A6NED2 376 aa1.81□□□□□ -2.12
SCARNA21.1-201ENST00000515996 SPTLC1O15269 473 aa1.81□□□□□ -2.12
SCARNA21.1-201ENST00000515996 SPINT1O43278 529 aa1.81□□□□□ -2.12
SCARNA21.1-201ENST00000515996 SUV39H1O43463 412 aa1.81□□□□□ -2.12
SCARNA21.1-201ENST00000515996 APBA3O96018 575 aa1.81□□□□□ -2.12
SCARNA21.1-201ENST00000515996 PTCRAQ6ISU1 281 aaPredicted RBP1.81□□□□□ -2.12
SCARNA21.1-201ENST00000515996 TRIM22Q8IYM9 498 aa1.81□□□□□ -2.12
SCARNA21.1-201ENST00000515996 TRIM11Q96F44 468 aa1.81□□□□□ -2.12
SCARNA21.1-201ENST00000515996 GDF2Q9UK05 429 aaPredicted RBP1.81□□□□□ -2.12
SCARNA21.1-201ENST00000515996 VARSP26640 1264 aaKnown RBP1.8□□□□□ -2.12
SCARNA21.1-201ENST00000515996 FKBP8Q14318 412 aa1.8□□□□□ -2.12
SCARNA21.1-201ENST00000515996 ZNF648Q5T619 568 aaPredicted RBP1.8□□□□□ -2.12
SCARNA21.1-201ENST00000515996 MICALL1Q8N3F8 863 aa1.8□□□□□ -2.12
SCARNA21.1-201ENST00000515996 TRERF1Q96PN7 1200 aa1.8□□□□□ -2.12
SCARNA21.1-201ENST00000515996 PLVAPQ9BX97 442 aa1.8□□□□□ -2.12
SCARNA21.1-201ENST00000515996 OVOL3O00110 214 aa1.79□□□□□ -2.12
SCARNA21.1-201ENST00000515996 CTSOP43234 321 aaPredicted RBP1.79□□□□□ -2.12
SCARNA21.1-201ENST00000515996 LINC01559Q495D7 138 aa1.79□□□□□ -2.12
SCARNA21.1-201ENST00000515996 GOLGA6L1Q8N7Z2 621 aa1.79□□□□□ -2.12
SCARNA21.1-201ENST00000515996 RBM46Q8TBY0 533 aaKnown RBP1.79□□□□□ -2.12
SCARNA21.1-201ENST00000515996 KLRG1Q96E93 195 aa1.79□□□□□ -2.12
SCARNA21.1-201ENST00000515996 GMCL1Q96IK5 515 aa1.79□□□□□ -2.12
SCARNA21.1-201ENST00000515996 BTBD6Q96KE9 485 aa1.79□□□□□ -2.12
SCARNA21.1-201ENST00000515996 NPDC1Q9NQX5 325 aaPredicted RBP1.79□□□□□ -2.12
SCARNA21.1-201ENST00000515996 ADGRE2Q9UHX3 823 aa1.79□□□□□ -2.12
SCARNA21.1-201ENST00000515996 ADAMTS4O75173 837 aa1.78□□□□□ -2.12
SCARNA21.1-201ENST00000515996 KRTAP5-9P26371 169 aa1.78□□□□□ -2.12
SCARNA21.1-201ENST00000515996 NR5A1Q13285 461 aa1.78□□□□□ -2.12
SCARNA21.1-201ENST00000515996 ARID5BQ14865 1188 aa1.78□□□□□ -2.12
SCARNA21.1-201ENST00000515996 DBN1Q16643 649 aa1.78□□□□□ -2.12
SCARNA21.1-201ENST00000515996 KRTAP19-4Q3LI73 84 aa1.78□□□□□ -2.12
SCARNA21.1-201ENST00000515996 DBX2Q6ZNG2 339 aa1.78□□□□□ -2.12
SCARNA21.1-201ENST00000515996 SLCO4C1Q6ZQN7 724 aa1.78□□□□□ -2.12
SCARNA21.1-201ENST00000515996 RNF217Q8TC41 542 aa1.78□□□□□ -2.12
SCARNA21.1-201ENST00000515996 KIAA1324LA8MWY0 1029 aaPredicted RBP1.77□□□□□ -2.13
SCARNA21.1-201ENST00000515996 MED26O95402 600 aa1.77□□□□□ -2.13
SCARNA21.1-201ENST00000515996 RSPH4AQ5TD94 716 aa1.77□□□□□ -2.13
SCARNA21.1-201ENST00000515996 KRTAP5-11Q6L8G4 156 aa1.77□□□□□ -2.13
SCARNA21.1-201ENST00000515996 TP53INP1Q96A56 240 aa1.77□□□□□ -2.13
SCARNA21.1-201ENST00000515996 CDK15Q96Q40 435 aa1.77□□□□□ -2.13
SCARNA21.1-201ENST00000515996 USB1Q9BQ65 265 aaKnown RBP1.77□□□□□ -2.13
SCARNA21.1-201ENST00000515996 TMPRSS5Q9H3S3 457 aa1.77□□□□□ -2.13
SCARNA21.1-201ENST00000515996 PDIA6Q15084 440 aa1.76□□□□□ -2.13
SCARNA21.1-201ENST00000515996 Q3C1V9 767 aa1.76□□□□□ -2.13
SCARNA21.1-201ENST00000515996 PRRT3Q5FWE3 981 aa1.76□□□□□ -2.13
SCARNA21.1-201ENST00000515996 RIPOR1Q6ZS17 1223 aa1.76□□□□□ -2.13
SCARNA21.1-201ENST00000515996 FAM174AQ8TBP5 190 aa1.76□□□□□ -2.13
SCARNA21.1-201ENST00000515996 NACC1Q96RE7 527 aa1.76□□□□□ -2.13
SCARNA21.1-201ENST00000515996 INSM2Q96T92 566 aaPredicted RBP1.76□□□□□ -2.13
SCARNA21.1-201ENST00000515996 ADGRG1Q9Y653 693 aa1.76□□□□□ -2.13
SCARNA21.1-201ENST00000515996 EPXP11678 715 aa1.75□□□□□ -2.13
SCARNA21.1-201ENST00000515996 GRM5P41594 1212 aa1.75□□□□□ -2.13
SCARNA21.1-201ENST00000515996 CBLBQ13191 982 aa1.75□□□□□ -2.13
SCARNA21.1-201ENST00000515996 CAMK2BQ13554 666 aa1.75□□□□□ -2.13
SCARNA21.1-201ENST00000515996 PRPF38BQ5VTL8 546 aaKnown RBP1.75□□□□□ -2.13
SCARNA21.1-201ENST00000515996 ZNF511Q8NB15 262 aa1.75□□□□□ -2.13
SCARNA21.1-201ENST00000515996 BAP1Q92560 729 aa1.75□□□□□ -2.13
SCARNA21.1-201ENST00000515996 ASIC4Q96FT7 647 aa1.75□□□□□ -2.13
SCARNA21.1-201ENST00000515996 NUDT12Q9BQG2 462 aa1.75□□□□□ -2.13
SCARNA21.1-201ENST00000515996 POLMQ9NP87 494 aaPredicted RBP1.75□□□□□ -2.13
SCARNA21.1-201ENST00000515996 GGA1Q9UJY5 639 aa1.75□□□□□ -2.13
SCARNA21.1-201ENST00000515996 GRXCR2A6NFK2 248 aa1.74□□□□□ -2.13
SCARNA21.1-201ENST00000515996 FAM229AH3BQW9 127 aa1.74□□□□□ -2.13
SCARNA21.1-201ENST00000515996 MBTPS1Q14703 1052 aa1.74□□□□□ -2.13
SCARNA21.1-201ENST00000515996 TTLL10Q6ZVT0 673 aa1.74□□□□□ -2.13
SCARNA21.1-201ENST00000515996 CHSY3Q70JA7 882 aa1.74□□□□□ -2.13
SCARNA21.1-201ENST00000515996 ZDHHC13Q8IUH4 622 aa1.74□□□□□ -2.13
SCARNA21.1-201ENST00000515996 RDH13Q8NBN7 331 aa1.74□□□□□ -2.13
SCARNA21.1-201ENST00000515996 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP1.73□□□□□ -2.13
SCARNA21.1-201ENST00000515996 SPDYE3A6NKU9 549 aa1.73□□□□□ -2.13
SCARNA21.1-201ENST00000515996 JUNDP17535 347 aa1.73□□□□□ -2.13
SCARNA21.1-201ENST00000515996 ADGRE1Q14246 886 aa1.73□□□□□ -2.13
SCARNA21.1-201ENST00000515996 PKN1Q16512 942 aa1.73□□□□□ -2.13
SCARNA21.1-201ENST00000515996 FAM161AQ3B820 660 aa1.73□□□□□ -2.13
SCARNA21.1-201ENST00000515996 TXNRD3Q86VQ6 643 aa1.73□□□□□ -2.13
SCARNA21.1-201ENST00000515996 RNF135Q8IUD6 432 aa1.73□□□□□ -2.13
SCARNA21.1-201ENST00000515996 RAPGEFL1Q9UHV5 662 aa1.73□□□□□ -2.13
SCARNA21.1-201ENST00000515996 H7C1W4 665 aa1.72□□□□□ -2.13
SCARNA21.1-201ENST00000515996 FSHRP23945 695 aa1.72□□□□□ -2.13
SCARNA21.1-201ENST00000515996 GRIK4Q16099 956 aa1.72□□□□□ -2.13
SCARNA21.1-201ENST00000515996 Q6ZVU0 165 aa1.72□□□□□ -2.13
SCARNA21.1-201ENST00000515996 GGNQ86UU5 652 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms