RNA–Protein interactions for RNA: ENST00000514603.1

GYPA-210, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 5

Gene GYPA, Length 613 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-210ENST00000514603 CYP4X1Q8N118 509 aa8.9□□□□□ -0.98
GYPA-210ENST00000514603 SNIP1Q8TAD8 396 aaKnown RBP8.9□□□□□ -0.98
GYPA-210ENST00000514603 CALR3Q96L12 384 aaKnown RBP8.9□□□□□ -0.98
GYPA-210ENST00000514603 C1orf115Q9H7X2 142 aa8.9□□□□□ -0.98
GYPA-210ENST00000514603 CDV3Q9UKY7 258 aaKnown RBP8.9□□□□□ -0.98
GYPA-210ENST00000514603 PDZRN3Q9UPQ7 1066 aa8.9□□□□□ -0.98
GYPA-210ENST00000514603 TTC24A2A3L6 582 aaPredicted RBP8.89□□□□□ -0.99
GYPA-210ENST00000514603 GIGYF1O75420 1035 aaPredicted RBP8.89□□□□□ -0.99
GYPA-210ENST00000514603 ADH1CP00326 375 aa8.89□□□□□ -0.99
GYPA-210ENST00000514603 FSHRP23945 695 aa8.89□□□□□ -0.99
GYPA-210ENST00000514603 MPNDQ8N594 471 aa8.89□□□□□ -0.99
GYPA-210ENST00000514603 KCTD15Q96SI1 283 aaPredicted RBP8.89□□□□□ -0.99
GYPA-210ENST00000514603 TOR4AQ9NXH8 423 aa8.89□□□□□ -0.99
GYPA-210ENST00000514603 CEP126Q9P2H0 1117 aa8.89□□□□□ -0.99
GYPA-210ENST00000514603 J3QL48 77 aa8.88□□□□□ -0.99
GYPA-210ENST00000514603 GRM5P41594 1212 aa8.88□□□□□ -0.99
GYPA-210ENST00000514603 RAB15P59190 212 aa8.88□□□□□ -0.99
GYPA-210ENST00000514603 ESPNB1AK53 854 aa8.86□□□□□ -0.99
GYPA-210ENST00000514603 PIK3CDO00329 1044 aa8.86□□□□□ -0.99
GYPA-210ENST00000514603 INTS6LQ5JSJ4 861 aaKnown RBP8.86□□□□□ -0.99
GYPA-210ENST00000514603 UCN2Q96RP3 112 aa8.86□□□□□ -0.99
GYPA-210ENST00000514603 WASF2Q9Y6W5 498 aa8.86□□□□□ -0.99
GYPA-210ENST00000514603 NR3C2P08235 984 aa8.85□□□□□ -0.99
GYPA-210ENST00000514603 SMPD1P17405 629 aa8.85□□□□□ -0.99
GYPA-210ENST00000514603 SLFNL1Q499Z3 407 aa8.85□□□□□ -0.99
GYPA-210ENST00000514603 NR5A1Q13285 461 aa8.84□□□□□ -0.99
GYPA-210ENST00000514603 NNTQ13423 1086 aa8.84□□□□□ -0.99
GYPA-210ENST00000514603 RNF135Q8IUD6 432 aa8.84□□□□□ -0.99
GYPA-210ENST00000514603 GFRA3O60609 400 aa8.83□□□□□ -1
GYPA-210ENST00000514603 TRAF7Q6Q0C0 670 aa8.83□□□□□ -1
GYPA-210ENST00000514603 SEPT12Q8IYM1 358 aa8.83□□□□□ -1
GYPA-210ENST00000514603 PHTF2Q8N3S3 785 aa8.83□□□□□ -1
GYPA-210ENST00000514603 CCDC82Q8N4S0 544 aa8.83□□□□□ -1
GYPA-210ENST00000514603 RNF20Q5VTR2 975 aa8.82□□□□□ -1
GYPA-210ENST00000514603 TBC1D9Q6ZT07 1266 aa8.82□□□□□ -1
GYPA-210ENST00000514603 CCDC116Q8IYX3 515 aa8.82□□□□□ -1
GYPA-210ENST00000514603 CCDC85AQ96PX6 553 aaPredicted RBP8.82□□□□□ -1
GYPA-210ENST00000514603 FAM187AA6NFU0 413 aa8.81□□□□□ -1
GYPA-210ENST00000514603 ERVH48-1M5A8F1 160 aa8.81□□□□□ -1
GYPA-210ENST00000514603 SKIP12755 728 aa8.81□□□□□ -1
GYPA-210ENST00000514603 TSGA10IPQ3SY00 556 aa8.81□□□□□ -1
GYPA-210ENST00000514603 PPP1R26Q5T8A7 1209 aaPredicted RBP8.81□□□□□ -1
GYPA-210ENST00000514603 HPS1Q92902 700 aa8.81□□□□□ -1
GYPA-210ENST00000514603 CCDC97Q96F63 343 aaPredicted RBP8.81□□□□□ -1
GYPA-210ENST00000514603 ARXQ96QS3 562 aa8.81□□□□□ -1
GYPA-210ENST00000514603 PLPP7Q8NBV4 271 aa8.8□□□□□ -1
GYPA-210ENST00000514603 PPP1R12CQ9BZL4 782 aa8.8□□□□□ -1
GYPA-210ENST00000514603 TMPRSS4Q9NRS4 437 aa8.8□□□□□ -1
GYPA-210ENST00000514603 PCDHB11Q9Y5F2 797 aa8.8□□□□□ -1
GYPA-210ENST00000514603 PALM3A6NDB9 673 aaPredicted RBP8.79□□□□□ -1
GYPA-210ENST00000514603 NRG2O14511 850 aaPredicted RBP8.79□□□□□ -1
GYPA-210ENST00000514603 DHX9Q08211 1270 aaKnown RBP8.79□□□□□ -1
GYPA-210ENST00000514603 NFATC2IPQ8NCF5 419 aa8.79□□□□□ -1
GYPA-210ENST00000514603 TFIP11Q9UBB9 837 aaKnown RBP8.79□□□□□ -1
GYPA-210ENST00000514603 DOLKQ9UPQ8 538 aa8.79□□□□□ -1
GYPA-210ENST00000514603 ATP9BO43861 1147 aa8.78□□□□□ -1
GYPA-210ENST00000514603 DEPDC4Q8N2C3 294 aa8.78□□□□□ -1
GYPA-210ENST00000514603 ARID3AQ99856 593 aa8.78□□□□□ -1
GYPA-210ENST00000514603 CDCA7Q9BWT1 371 aaPredicted RBP8.78□□□□□ -1
GYPA-210ENST00000514603 SERPINA10Q9UK55 444 aa8.78□□□□□ -1
GYPA-210ENST00000514603 CHIC2Q9UKJ5 165 aa8.78□□□□□ -1
GYPA-210ENST00000514603 USP17L5A8MUK1 530 aa8.77□□□□□ -1.01
GYPA-210ENST00000514603 WDR4P57081 412 aaKnown RBP8.77□□□□□ -1.01
GYPA-210ENST00000514603 OXLD1Q5BKU9 147 aa8.77□□□□□ -1.01
GYPA-210ENST00000514603 CCDC125Q86Z20 511 aa8.77□□□□□ -1.01
GYPA-210ENST00000514603 ZNF784Q8NCA9 323 aaPredicted RBP8.77□□□□□ -1.01
GYPA-210ENST00000514603 ITPKCQ96DU7 683 aa8.77□□□□□ -1.01
GYPA-210ENST00000514603 MAFBQ9Y5Q3 323 aaPredicted RBP8.77□□□□□ -1.01
GYPA-210ENST00000514603 EMILIN1Q9Y6C2 1016 aa8.77□□□□□ -1.01
GYPA-210ENST00000514603 USP17L3A6NCW0 530 aa8.76□□□□□ -1.01
GYPA-210ENST00000514603 USP17L4A6NCW7 530 aa8.76□□□□□ -1.01
GYPA-210ENST00000514603 ZIC2O95409 532 aaPredicted RBP8.76□□□□□ -1.01
GYPA-210ENST00000514603 TIMP2P16035 220 aa8.76□□□□□ -1.01
GYPA-210ENST00000514603 MAP7D1Q3KQU3 841 aa8.76□□□□□ -1.01
GYPA-210ENST00000514603 PKDCCQ504Y2 493 aa8.76□□□□□ -1.01
GYPA-210ENST00000514603 CFAP70Q5T0N1 1121 aa8.76□□□□□ -1.01
GYPA-210ENST00000514603 USP17L2Q6R6M4 530 aa8.76□□□□□ -1.01
GYPA-210ENST00000514603 USP17L1Q7RTZ2 530 aa8.76□□□□□ -1.01
GYPA-210ENST00000514603 ZNF775Q96BV0 537 aaPredicted RBP8.76□□□□□ -1.01
GYPA-210ENST00000514603 KLF16Q9BXK1 252 aaPredicted RBP8.76□□□□□ -1.01
GYPA-210ENST00000514603 ZFAND3Q9H8U3 227 aa8.76□□□□□ -1.01
GYPA-210ENST00000514603 CYLDQ9NQC7 956 aa8.76□□□□□ -1.01
GYPA-210ENST00000514603 LMOD1P29536 600 aaPredicted RBP8.75□□□□□ -1.01
GYPA-210ENST00000514603 SCTRP47872 440 aa8.75□□□□□ -1.01
GYPA-210ENST00000514603 NCOA4Q13772 614 aa8.75□□□□□ -1.01
GYPA-210ENST00000514603 LAPTM4AQ15012 233 aa8.75□□□□□ -1.01
GYPA-210ENST00000514603 PGPEP1Q9NXJ5 209 aa8.75□□□□□ -1.01
GYPA-210ENST00000514603 LOC100996750A0A140TA64 210 aa8.74□□□□□ -1.01
GYPA-210ENST00000514603 DGAT1O75907 488 aa8.74□□□□□ -1.01
GYPA-210ENST00000514603 RFX1P22670 979 aa8.74□□□□□ -1.01
GYPA-210ENST00000514603 KRTAP4-6Q9BYQ5 205 aa8.74□□□□□ -1.01
GYPA-210ENST00000514603 LILRA1O75019 489 aa8.73□□□□□ -1.01
GYPA-210ENST00000514603 ERVK-9P63128 1117 aa8.73□□□□□ -1.01
GYPA-210ENST00000514603 MYT1Q01538 1121 aa8.73□□□□□ -1.01
GYPA-210ENST00000514603 EML3Q32P44 896 aa8.73□□□□□ -1.01
GYPA-210ENST00000514603 PLEKHM2Q8IWE5 1019 aa8.73□□□□□ -1.01
GYPA-210ENST00000514603 HOMEZQ8IX15 550 aa8.73□□□□□ -1.01
GYPA-210ENST00000514603 AVPP01185 164 aa8.72□□□□□ -1.01
GYPA-210ENST00000514603 CBLBQ13191 982 aa8.72□□□□□ -1.01
GYPA-210ENST00000514603 CC2D2BQ6DHV5 1058 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms