RNA–Protein interactions for RNA: ENST00000513448.5

PROM1-215, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 2,042 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-215ENST00000513448 NOB1Q9ULX3 412 aaKnown RBP11.84□□□□□ -0.51
PROM1-215ENST00000513448 PDZRN3Q9UPQ7 1066 aa11.84□□□□□ -0.51
PROM1-215ENST00000513448 SLIT1O75093 1534 aa11.84□□□□□ -0.51
PROM1-215ENST00000513448 HAP1P54257 671 aaPredicted RBP11.84□□□□□ -0.51
PROM1-215ENST00000513448 TNNQ9UQP3 1299 aa11.84□□□□□ -0.51
PROM1-215ENST00000513448 PRR36Q9H6K5 1346 aa11.83□□□□□ -0.52
PROM1-215ENST00000513448 ARHGAP23Q9P227 1491 aa11.83□□□□□ -0.52
PROM1-215ENST00000513448 PHACTR3Q96KR7 559 aa11.83□□□□□ -0.52
PROM1-215ENST00000513448 ZBTB40Q9NUA8 1239 aa11.83□□□□□ -0.52
PROM1-215ENST00000513448 TBX22Q9Y458 520 aa11.83□□□□□ -0.52
PROM1-215ENST00000513448 TOPAZ1Q8N9V7 1692 aa11.83□□□□□ -0.52
PROM1-215ENST00000513448 ITPRIPQ8IWB1 547 aa11.82□□□□□ -0.52
PROM1-215ENST00000513448 CFAP44Q96MT7 982 aa11.82□□□□□ -0.52
PROM1-215ENST00000513448 UPF2Q9HAU5 1272 aaKnown RBP11.82□□□□□ -0.52
PROM1-215ENST00000513448 TTC21BQ7Z4L5 1316 aa11.82□□□□□ -0.52
PROM1-215ENST00000513448 NRKQ7Z2Y5 1582 aa11.82□□□□□ -0.52
PROM1-215ENST00000513448 VAMP4O75379 141 aa11.82□□□□□ -0.52
PROM1-215ENST00000513448 SMC5Q8IY18 1101 aa11.82□□□□□ -0.52
PROM1-215ENST00000513448 PIK3R4Q99570 1358 aa11.82□□□□□ -0.52
PROM1-215ENST00000513448 DIP2AQ14689 1571 aa11.81□□□□□ -0.52
PROM1-215ENST00000513448 TTC21AQ8NDW8 1320 aa11.81□□□□□ -0.52
PROM1-215ENST00000513448 PTCH1Q13635 1447 aa11.81□□□□□ -0.52
PROM1-215ENST00000513448 HMOX1P09601 288 aa11.81□□□□□ -0.52
PROM1-215ENST00000513448 LTKP29376 864 aa11.81□□□□□ -0.52
PROM1-215ENST00000513448 USP31Q70CQ4 1352 aa11.81□□□□□ -0.52
PROM1-215ENST00000513448 OVOS2A0A0J9YW53 1432 aa11.81□□□□□ -0.52
PROM1-215ENST00000513448 USP6P35125 1406 aa11.81□□□□□ -0.52
PROM1-215ENST00000513448 OVOS2Q6IE36 1432 aa11.81□□□□□ -0.52
PROM1-215ENST00000513448 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.81□□□□□ -0.52
PROM1-215ENST00000513448 FBLN1P23142 703 aa11.81□□□□□ -0.52
PROM1-215ENST00000513448 TMEM57Q8N5G2 664 aa11.81□□□□□ -0.52
PROM1-215ENST00000513448 USP19O94966 1318 aa11.8□□□□□ -0.52
PROM1-215ENST00000513448 ACEP12821 1306 aa11.8□□□□□ -0.52
PROM1-215ENST00000513448 DEKP35659 375 aaKnown RBP11.8□□□□□ -0.52
PROM1-215ENST00000513448 THEMISQ8N1K5 641 aaPredicted RBP11.8□□□□□ -0.52
PROM1-215ENST00000513448 KIF24Q5T7B8 1368 aa11.79□□□□□ -0.52
PROM1-215ENST00000513448 BECN1Q14457 450 aa11.79□□□□□ -0.52
PROM1-215ENST00000513448 MRPL50Q8N5N7 158 aaKnown RBP11.79□□□□□ -0.52
PROM1-215ENST00000513448 SSH2Q76I76 1423 aa11.79□□□□□ -0.52
PROM1-215ENST00000513448 NALCNQ8IZF0 1738 aa11.79□□□□□ -0.52
PROM1-215ENST00000513448 RRS1Q15050 365 aaKnown RBP11.79□□□□□ -0.52
PROM1-215ENST00000513448 ZRANB1Q9UGI0 708 aa11.79□□□□□ -0.52
PROM1-215ENST00000513448 NCKAP5LQ9HCH0 1330 aa11.78□□□□□ -0.52
PROM1-215ENST00000513448 MBIPQ9NS73 344 aa11.78□□□□□ -0.52
PROM1-215ENST00000513448 PTPRUQ92729 1446 aa11.77□□□□□ -0.52
PROM1-215ENST00000513448 API5Q9BZZ5 524 aaKnown RBP11.77□□□□□ -0.52
PROM1-215ENST00000513448 EIF4A2Q14240 407 aaKnown RBP11.77□□□□□ -0.53
PROM1-215ENST00000513448 TWISTNBQ3B726 338 aaPredicted RBP11.77□□□□□ -0.53
PROM1-215ENST00000513448 GCC1Q96CN9 775 aa11.77□□□□□ -0.53
PROM1-215ENST00000513448 AMOTL2Q9Y2J4 779 aa11.77□□□□□ -0.53
PROM1-215ENST00000513448 LAS1LQ9Y4W2 734 aaKnown RBP11.77□□□□□ -0.53
PROM1-215ENST00000513448 DLG5Q8TDM6 1919 aa11.76□□□□□ -0.53
PROM1-215ENST00000513448 ZBTB7BO15156 539 aaPredicted RBP11.76□□□□□ -0.53
PROM1-215ENST00000513448 TBC1D32Q96NH3 1257 aa11.76□□□□□ -0.53
PROM1-215ENST00000513448 ABCC4O15439 1325 aa11.76□□□□□ -0.53
PROM1-215ENST00000513448 NUCB1Q02818 461 aa11.76□□□□□ -0.53
PROM1-215ENST00000513448 KIAA0232Q92628 1395 aa11.75□□□□□ -0.53
PROM1-215ENST00000513448 ANKARQ7Z5J8 1434 aa11.75□□□□□ -0.53
PROM1-215ENST00000513448 SEC24BO95487 1268 aa11.75□□□□□ -0.53
PROM1-215ENST00000513448 ARHGEF10O15013 1369 aa11.75□□□□□ -0.53
PROM1-215ENST00000513448 SULT6B1Q6IMI4 303 aa11.74□□□□□ -0.53
PROM1-215ENST00000513448 SLC26A8Q96RN1 970 aa11.74□□□□□ -0.53
PROM1-215ENST00000513448 RIMS1Q86UR5 1692 aaKnown RBP11.74□□□□□ -0.53
PROM1-215ENST00000513448 RGPD1P0DJD0 1748 aa11.74□□□□□ -0.53
PROM1-215ENST00000513448 CHL1O00533 1208 aa11.74□□□□□ -0.53
PROM1-215ENST00000513448 THUMPD2Q9BTF0 503 aaKnown RBP11.74□□□□□ -0.53
PROM1-215ENST00000513448 FER1L4A9Z1Z3 1794 aa11.73□□□□□ -0.53
PROM1-215ENST00000513448 EIF5BO60841 1220 aaKnown RBP11.73□□□□□ -0.53
PROM1-215ENST00000513448 CEBPAP49715 358 aaPredicted RBP11.73□□□□□ -0.53
PROM1-215ENST00000513448 NFKBIBQ15653 356 aa11.73□□□□□ -0.53
PROM1-215ENST00000513448 TSPYL6Q8N831 410 aa11.73□□□□□ -0.53
PROM1-215ENST00000513448 SBNO1A3KN83 1393 aa11.73□□□□□ -0.53
PROM1-215ENST00000513448 FLT4P35916 1363 aa11.73□□□□□ -0.53
PROM1-215ENST00000513448 XRN1Q8IZH2 1706 aaKnown RBP11.72□□□□□ -0.53
PROM1-215ENST00000513448 KDRP35968 1356 aa11.72□□□□□ -0.53
PROM1-215ENST00000513448 SLC4A3P48751 1232 aa11.72□□□□□ -0.53
PROM1-215ENST00000513448 CHD1LQ86WJ1 897 aa11.72□□□□□ -0.53
PROM1-215ENST00000513448 C8orf58Q8NAV2 365 aa11.72□□□□□ -0.53
PROM1-215ENST00000513448 HTATSF1O43719 755 aaKnown RBP11.71□□□□□ -0.53
PROM1-215ENST00000513448 NGDNQ8NEJ9 315 aaKnown RBP11.71□□□□□ -0.53
PROM1-215ENST00000513448 PTPRCP08575 1304 aa11.71□□□□□ -0.54
PROM1-215ENST00000513448 HSP90AB2PQ58FF8 381 aa11.7□□□□□ -0.54
PROM1-215ENST00000513448 INTS3Q68E01 1043 aaKnown RBP11.7□□□□□ -0.54
PROM1-215ENST00000513448 PEAK1Q9H792 1746 aa11.7□□□□□ -0.54
PROM1-215ENST00000513448 FAM83GA6ND36 823 aa11.7□□□□□ -0.54
PROM1-215ENST00000513448 BMP2KLQ5H9B9 411 aa11.7□□□□□ -0.54
PROM1-215ENST00000513448 AEBP1Q8IUX7 1158 aa11.7□□□□□ -0.54
PROM1-215ENST00000513448 MAP3K19Q56UN5 1328 aa11.69□□□□□ -0.54
PROM1-215ENST00000513448 GAS2L2Q8NHY3 880 aa11.69□□□□□ -0.54
PROM1-215ENST00000513448 USP54Q70EL1 1684 aa11.69□□□□□ -0.54
PROM1-215ENST00000513448 ELL2O00472 640 aaPredicted RBP11.69□□□□□ -0.54
PROM1-215ENST00000513448 C22orf23Q9BZE7 217 aa11.69□□□□□ -0.54
PROM1-215ENST00000513448 SOS1Q07889 1333 aaPredicted RBP11.68□□□□□ -0.54
PROM1-215ENST00000513448 IGSF1Q8N6C5 1336 aa11.68□□□□□ -0.54
PROM1-215ENST00000513448 FMN2Q9NZ56 1722 aa11.68□□□□□ -0.54
PROM1-215ENST00000513448 RTF1Q92541 710 aaKnown RBP11.68□□□□□ -0.54
PROM1-215ENST00000513448 CRB1P82279 1406 aa11.68□□□□□ -0.54
PROM1-215ENST00000513448 NUTM2FA1L443 756 aa11.67□□□□□ -0.54
PROM1-215ENST00000513448 DCTN1Q14203 1278 aa11.67□□□□□ -0.54
PROM1-215ENST00000513448 RPAP2Q8IXW5 612 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms