RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 CDK12Q9NYV4 1490 aaPredicted RBP13.8□□□□□ -0.2
TRIO-220ENST00000512979 C19orf67A6NJJ6 358 aa13.8□□□□□ -0.2
TRIO-220ENST00000512979 SAFB2Q14151 953 aaKnown RBP eCLIP13.8□□□□□ -0.2
TRIO-220ENST00000512979 SPDYE16A6NNV3 312 aaPredicted RBP13.79□□□□□ -0.2
TRIO-220ENST00000512979 RBM6P78332 1123 aaKnown RBP13.79□□□□□ -0.2
TRIO-220ENST00000512979 PDIA6Q15084 440 aa13.79□□□□□ -0.2
TRIO-220ENST00000512979 DPY19L2Q6NUT2 758 aa13.79□□□□□ -0.2
TRIO-220ENST00000512979 PRAM1Q96QH2 718 aa13.79□□□□□ -0.2
TRIO-220ENST00000512979 BMP2KQ9NSY1 1161 aaPredicted RBP13.79□□□□□ -0.2
TRIO-220ENST00000512979 HRCP23327 699 aa13.78□□□□□ -0.2
TRIO-220ENST00000512979 UPF1Q92900 1129 aaKnown RBP eCLIP13.78□□□□□ -0.2
TRIO-220ENST00000512979 POGKQ9P215 609 aa13.78□□□□□ -0.2
TRIO-220ENST00000512979 USP21Q9UK80 565 aa13.78□□□□□ -0.2
TRIO-220ENST00000512979 COL22A1Q8NFW1 1626 aaPredicted RBP13.78□□□□□ -0.2
TRIO-220ENST00000512979 FMN2Q9NZ56 1722 aa13.78□□□□□ -0.2
TRIO-220ENST00000512979 RGS12O14924 1447 aa13.77□□□□□ -0.21
TRIO-220ENST00000512979 DCAF11Q8TEB1 546 aa13.77□□□□□ -0.21
TRIO-220ENST00000512979 TRIM35Q9UPQ4 493 aa13.77□□□□□ -0.21
TRIO-220ENST00000512979 FNBP4Q8N3X1 1017 aaPredicted RBP13.76□□□□□ -0.21
TRIO-220ENST00000512979 TRPC5Q9UL62 973 aaPredicted RBP13.76□□□□□ -0.21
TRIO-220ENST00000512979 DLC1Q96QB1 1528 aa13.75□□□□□ -0.21
TRIO-220ENST00000512979 KRT28Q7Z3Y7 464 aa13.75□□□□□ -0.21
TRIO-220ENST00000512979 MICALL2Q8IY33 904 aa13.75□□□□□ -0.21
TRIO-220ENST00000512979 TMC2Q8TDI7 906 aa13.75□□□□□ -0.21
TRIO-220ENST00000512979 TRAK1Q9UPV9 953 aa13.75□□□□□ -0.21
TRIO-220ENST00000512979 KIF1AQ12756 1690 aa13.75□□□□□ -0.21
TRIO-220ENST00000512979 ADGRB1O14514 1584 aa13.75□□□□□ -0.21
TRIO-220ENST00000512979 SPATA31A3Q5VYP0 1347 aa13.74□□□□□ -0.21
TRIO-220ENST00000512979 TRIM66O15016 1216 aa13.73□□□□□ -0.21
TRIO-220ENST00000512979 FOXK1P85037 733 aa13.73□□□□□ -0.21
TRIO-220ENST00000512979 IL27Q8NEV9 243 aa13.73□□□□□ -0.21
TRIO-220ENST00000512979 STAC3Q96MF2 364 aa13.73□□□□□ -0.21
TRIO-220ENST00000512979 KDM4CQ9H3R0 1056 aa13.73□□□□□ -0.21
TRIO-220ENST00000512979 ATRNO75882 1429 aa13.73□□□□□ -0.21
TRIO-220ENST00000512979 PSME1Q06323 249 aa13.72□□□□□ -0.21
TRIO-220ENST00000512979 HIRIP3Q9BW71 556 aaPredicted RBP13.72□□□□□ -0.21
TRIO-220ENST00000512979 MINK1Q8N4C8 1332 aaPredicted RBP13.71□□□□□ -0.21
TRIO-220ENST00000512979 PDE4DQ08499 809 aa13.71□□□□□ -0.21
TRIO-220ENST00000512979 HOMEZQ8IX15 550 aa13.71□□□□□ -0.21
TRIO-220ENST00000512979 PMFBP1Q8TBY8 1022 aa13.71□□□□□ -0.21
TRIO-220ENST00000512979 DAXXQ9UER7 740 aaPredicted RBP13.71□□□□□ -0.21
TRIO-220ENST00000512979 TNS3Q68CZ2 1445 aa13.71□□□□□ -0.22
TRIO-220ENST00000512979 ANKARQ7Z5J8 1434 aa13.71□□□□□ -0.22
TRIO-220ENST00000512979 BCL9LQ86UU0 1499 aa13.7□□□□□ -0.22
TRIO-220ENST00000512979 ADGRB2O60241 1585 aa13.7□□□□□ -0.22
TRIO-220ENST00000512979 SBNO1A3KN83 1393 aa13.7□□□□□ -0.22
TRIO-220ENST00000512979 RGPD8O14715 1765 aaPredicted RBP13.69□□□□□ -0.22
TRIO-220ENST00000512979 GPR37O15354 613 aa13.68□□□□□ -0.22
TRIO-220ENST00000512979 PLPP6Q8IY26 295 aa13.68□□□□□ -0.22
TRIO-220ENST00000512979 CABLES1Q8TDN4 633 aa13.68□□□□□ -0.22
TRIO-220ENST00000512979 EIF3AQ14152 1382 aaKnown RBP13.68□□□□□ -0.22
TRIO-220ENST00000512979 MARF1Q9Y4F3 1742 aaKnown RBP13.67□□□□□ -0.22
TRIO-220ENST00000512979 WASLO00401 505 aaPredicted RBP13.67□□□□□ -0.22
TRIO-220ENST00000512979 GALR2O43603 387 aaPredicted RBP13.67□□□□□ -0.22
TRIO-220ENST00000512979 UNC5CLQ8IV45 518 aa13.67□□□□□ -0.22
TRIO-220ENST00000512979 PDCD7Q8N8D1 485 aaKnown RBP13.67□□□□□ -0.22
TRIO-220ENST00000512979 GJD4Q96KN9 370 aaPredicted RBP13.67□□□□□ -0.22
TRIO-220ENST00000512979 ARHGEF10O15013 1369 aa13.67□□□□□ -0.22
TRIO-220ENST00000512979 ATAD2Q6PL18 1390 aa13.67□□□□□ -0.22
TRIO-220ENST00000512979 USP32Q8NFA0 1604 aa13.67□□□□□ -0.22
TRIO-220ENST00000512979 PRR36Q9H6K5 1346 aa13.66□□□□□ -0.22
TRIO-220ENST00000512979 SLIT2O94813 1529 aa13.66□□□□□ -0.22
TRIO-220ENST00000512979 TULP4Q9NRJ4 1543 aa13.66□□□□□ -0.22
TRIO-220ENST00000512979 GPRASP1Q5JY77 1395 aa13.65□□□□□ -0.22
TRIO-220ENST00000512979 C2orf72A6NCS6 295 aa13.64□□□□□ -0.23
TRIO-220ENST00000512979 RALGAPBQ86X10 1494 aa13.63□□□□□ -0.23
TRIO-220ENST00000512979 GRXCR2A6NFK2 248 aa13.63□□□□□ -0.23
TRIO-220ENST00000512979 NGDNQ8NEJ9 315 aaKnown RBP13.63□□□□□ -0.23
TRIO-220ENST00000512979 ARHGEF28Q8N1W1 1705 aaKnown RBP13.62□□□□□ -0.23
TRIO-220ENST00000512979 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.62□□□□□ -0.23
TRIO-220ENST00000512979 MAP3K9P80192 1104 aa13.61□□□□□ -0.23
TRIO-220ENST00000512979 NUDT16Q96DE0 195 aaKnown RBP13.61□□□□□ -0.23
TRIO-220ENST00000512979 TMEM121BQ9BXQ6 578 aaPredicted RBP13.61□□□□□ -0.23
TRIO-220ENST00000512979 BOLA1Q9Y3E2 137 aa13.61□□□□□ -0.23
TRIO-220ENST00000512979 FAM83GA6ND36 823 aa13.6□□□□□ -0.23
TRIO-220ENST00000512979 KIF3CO14782 793 aa13.6□□□□□ -0.23
TRIO-220ENST00000512979 GLI3P10071 1580 aa13.6□□□□□ -0.23
TRIO-220ENST00000512979 VPS72Q15906 364 aa13.6□□□□□ -0.23
TRIO-220ENST00000512979 NBPF1Q3BBV0 1214 aa13.6□□□□□ -0.23
TRIO-220ENST00000512979 CDK19Q9BWU1 502 aa13.6□□□□□ -0.23
TRIO-220ENST00000512979 TRPM3Q9HCF6 1732 aaPredicted RBP13.6□□□□□ -0.23
TRIO-220ENST00000512979 CCDC9Q9Y3X0 531 aaKnown RBP13.6□□□□□ -0.23
TRIO-220ENST00000512979 ATP7BP35670 1465 aa13.6□□□□□ -0.23
TRIO-220ENST00000512979 ABCA3Q99758 1704 aa13.59□□□□□ -0.23
TRIO-220ENST00000512979 ATN1P54259 1190 aaPredicted RBP13.59□□□□□ -0.23
TRIO-220ENST00000512979 IRX5P78411 483 aaPredicted RBP13.59□□□□□ -0.23
TRIO-220ENST00000512979 PLCH1Q4KWH8 1693 aa13.57□□□□□ -0.24
TRIO-220ENST00000512979 ALS2Q96Q42 1657 aa13.57□□□□□ -0.24
TRIO-220ENST00000512979 KIAA1210Q9ULL0 1709 aa13.57□□□□□ -0.24
TRIO-220ENST00000512979 SEPT12Q8IYM1 358 aa13.57□□□□□ -0.24
TRIO-220ENST00000512979 OCEL1Q9H607 264 aa13.57□□□□□ -0.24
TRIO-220ENST00000512979 NWD2Q9ULI1 1742 aa13.56□□□□□ -0.24
TRIO-220ENST00000512979 G3V3G9 751 aa13.56□□□□□ -0.24
TRIO-220ENST00000512979 FAM117AQ9C073 453 aa13.56□□□□□ -0.24
TRIO-220ENST00000512979 BTG4Q9NY30 223 aa13.56□□□□□ -0.24
TRIO-220ENST00000512979 MAP2K5Q13163 448 aa13.55□□□□□ -0.24
TRIO-220ENST00000512979 CCDC125Q86Z20 511 aa13.55□□□□□ -0.24
TRIO-220ENST00000512979 L3MBTL2Q969R5 705 aa13.55□□□□□ -0.24
TRIO-220ENST00000512979 CCDC102AQ96A19 550 aa13.55□□□□□ -0.24
TRIO-220ENST00000512979 ACEP12821 1306 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms