RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 RNF223E7ERA6 249 aa10.75□□□□□ -0.69
RFC1-215ENST00000512881 S1PR4O95977 384 aa10.75□□□□□ -0.69
RFC1-215ENST00000512881 CD46P15529 392 aa10.75□□□□□ -0.69
RFC1-215ENST00000512881 MDM2Q00987 491 aaPredicted RBP10.75□□□□□ -0.69
RFC1-215ENST00000512881 SCUBE3Q8IX30 993 aa10.75□□□□□ -0.69
RFC1-215ENST00000512881 V9GY48 417 aaPredicted RBP10.75□□□□□ -0.69
RFC1-215ENST00000512881 PREX1Q8TCU6 1659 aa10.75□□□□□ -0.69
RFC1-215ENST00000512881 PTPRKQ15262 1439 aa10.75□□□□□ -0.69
RFC1-215ENST00000512881 MAP3K1Q13233 1512 aa10.74□□□□□ -0.69
RFC1-215ENST00000512881 C3P01024 1663 aa10.74□□□□□ -0.69
RFC1-215ENST00000512881 SUPT6HQ7KZ85 1726 aaKnown RBP10.74□□□□□ -0.69
RFC1-215ENST00000512881 WASHC2CQ9Y4E1 1318 aa10.74□□□□□ -0.69
RFC1-215ENST00000512881 PTPRTO14522 1441 aa10.74□□□□□ -0.69
RFC1-215ENST00000512881 FBXO31Q5XUX0 539 aaPredicted RBP10.73□□□□□ -0.69
RFC1-215ENST00000512881 EMID1Q96A84 441 aaPredicted RBP10.73□□□□□ -0.69
RFC1-215ENST00000512881 ATP6V1AP38606 617 aa10.72□□□□□ -0.69
RFC1-215ENST00000512881 ZC3H15Q8WU90 426 aaKnown RBP10.72□□□□□ -0.69
RFC1-215ENST00000512881 NCOA1Q15788 1441 aa10.72□□□□□ -0.69
RFC1-215ENST00000512881 MIA2Q96PC5 1412 aa10.72□□□□□ -0.69
RFC1-215ENST00000512881 ZMYND10O75800 440 aa10.71□□□□□ -0.69
RFC1-215ENST00000512881 MYOM3Q5VTT5 1437 aa10.71□□□□□ -0.69
RFC1-215ENST00000512881 THAP11Q96EK4 314 aa10.71□□□□□ -0.69
RFC1-215ENST00000512881 BARGINQ6ZT62 677 aa10.7□□□□□ -0.7
RFC1-215ENST00000512881 ANKLE1Q8NAG6 615 aa10.7□□□□□ -0.7
RFC1-215ENST00000512881 SPSB2Q99619 263 aa10.7□□□□□ -0.7
RFC1-215ENST00000512881 SLC27A5Q9Y2P5 690 aa10.7□□□□□ -0.7
RFC1-215ENST00000512881 ADGBQ8N7X0 1667 aa10.69□□□□□ -0.7
RFC1-215ENST00000512881 ARHGEF5Q12774 1597 aa10.69□□□□□ -0.7
RFC1-215ENST00000512881 PPEF1O14829 653 aaPredicted RBP10.69□□□□□ -0.7
RFC1-215ENST00000512881 SLC6A16Q9GZN6 736 aa10.69□□□□□ -0.7
RFC1-215ENST00000512881 GPCPD1Q9NPB8 672 aa10.69□□□□□ -0.7
RFC1-215ENST00000512881 STRCQ7RTU9 1775 aa10.69□□□□□ -0.7
RFC1-215ENST00000512881 MROH2AA6NES4 1674 aa10.69□□□□□ -0.7
RFC1-215ENST00000512881 TNRQ92752 1358 aa10.68□□□□□ -0.7
RFC1-215ENST00000512881 RRP7BPQ9NSQ0 103 aa10.68□□□□□ -0.7
RFC1-215ENST00000512881 FAM217BQ9NTX9 383 aaPredicted RBP10.68□□□□□ -0.7
RFC1-215ENST00000512881 CLTCQ00610 1675 aaKnown RBP10.68□□□□□ -0.7
RFC1-215ENST00000512881 CAMSAP1Q5T5Y3 1602 aa10.67□□□□□ -0.7
RFC1-215ENST00000512881 CLCN1P35523 988 aa10.67□□□□□ -0.7
RFC1-215ENST00000512881 REPIN1Q9BWE0 567 aaKnown RBP10.67□□□□□ -0.7
RFC1-215ENST00000512881 PLA2G2CQ5R387 149 aa10.66□□□□□ -0.7
RFC1-215ENST00000512881 ABCC5O15440 1437 aa10.66□□□□□ -0.7
RFC1-215ENST00000512881 RNF19BQ6ZMZ0 732 aa10.65□□□□□ -0.7
RFC1-215ENST00000512881 THEMISQ8N1K5 641 aaPredicted RBP10.65□□□□□ -0.7
RFC1-215ENST00000512881 CHIC2Q9UKJ5 165 aa10.65□□□□□ -0.7
RFC1-215ENST00000512881 SALL2Q9Y467 1007 aaPredicted RBP10.65□□□□□ -0.7
RFC1-215ENST00000512881 A2ML1A8K2U0 1454 aa10.65□□□□□ -0.7
RFC1-215ENST00000512881 PZPP20742 1482 aa10.65□□□□□ -0.7
RFC1-215ENST00000512881 PLA2R1Q13018 1463 aa10.65□□□□□ -0.7
RFC1-215ENST00000512881 KDM5DQ9BY66 1539 aa10.64□□□□□ -0.71
RFC1-215ENST00000512881 ZNF335Q9H4Z2 1342 aaPredicted RBP10.64□□□□□ -0.71
RFC1-215ENST00000512881 TCOF1Q13428 1488 aaKnown RBP10.64□□□□□ -0.71
RFC1-215ENST00000512881 KDM4AO75164 1064 aa10.64□□□□□ -0.71
RFC1-215ENST00000512881 FMNL1O95466 1100 aaPredicted RBP10.64□□□□□ -0.71
RFC1-215ENST00000512881 ANKLE2Q86XL3 938 aa10.64□□□□□ -0.71
RFC1-215ENST00000512881 FAM160A2Q8N612 972 aaPredicted RBP10.64□□□□□ -0.71
RFC1-215ENST00000512881 PRDM9Q9NQV7 894 aa10.64□□□□□ -0.71
RFC1-215ENST00000512881 KIF15Q9NS87 1388 aa10.64□□□□□ -0.71
RFC1-215ENST00000512881 SLC19A1P41440 591 aa10.63□□□□□ -0.71
RFC1-215ENST00000512881 LAPTM4AQ15012 233 aa10.63□□□□□ -0.71
RFC1-215ENST00000512881 AMHR2Q16671 573 aa10.63□□□□□ -0.71
RFC1-215ENST00000512881 BRICD5Q6PL45 260 aa10.63□□□□□ -0.71
RFC1-215ENST00000512881 HLA-CQ95604 372 aa10.63□□□□□ -0.71
RFC1-215ENST00000512881 FGD6Q6ZV73 1430 aa10.63□□□□□ -0.71
RFC1-215ENST00000512881 MAST1Q9Y2H9 1570 aa10.63□□□□□ -0.71
RFC1-215ENST00000512881 CEP170BQ9Y4F5 1589 aaPredicted RBP10.63□□□□□ -0.71
RFC1-215ENST00000512881 FAM135AQ9P2D6 1515 aa10.63□□□□□ -0.71
RFC1-215ENST00000512881 LTBP4Q8N2S1 1624 aa10.62□□□□□ -0.71
RFC1-215ENST00000512881 GFRA3O60609 400 aa10.62□□□□□ -0.71
RFC1-215ENST00000512881 GRIPAP1Q4V328 841 aa10.62□□□□□ -0.71
RFC1-215ENST00000512881 LIAT1Q6ZQX7 453 aa10.62□□□□□ -0.71
RFC1-215ENST00000512881 KRI1Q8N9T8 703 aaKnown RBP10.62□□□□□ -0.71
RFC1-215ENST00000512881 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.62□□□□□ -0.71
RFC1-215ENST00000512881 MYO3AQ8NEV4 1616 aa10.62□□□□□ -0.71
RFC1-215ENST00000512881 HOXA2O43364 376 aa10.61□□□□□ -0.71
RFC1-215ENST00000512881 FAM50AQ14320 339 aaKnown RBP10.61□□□□□ -0.71
RFC1-215ENST00000512881 Q6ZNB5 142 aa10.61□□□□□ -0.71
RFC1-215ENST00000512881 DAPK1P53355 1430 aa10.6□□□□□ -0.71
RFC1-215ENST00000512881 ABCC3O15438 1527 aa10.6□□□□□ -0.71
RFC1-215ENST00000512881 DUOX2Q9NRD8 1548 aa10.6□□□□□ -0.71
RFC1-215ENST00000512881 NRG2O14511 850 aaPredicted RBP10.6□□□□□ -0.71
RFC1-215ENST00000512881 LCE2BO14633 110 aa10.6□□□□□ -0.71
RFC1-215ENST00000512881 USP46P62068 366 aa10.6□□□□□ -0.71
RFC1-215ENST00000512881 MSS51Q4VC12 460 aa10.6□□□□□ -0.71
RFC1-215ENST00000512881 SPRYD7Q5W111 196 aa10.6□□□□□ -0.71
RFC1-215ENST00000512881 TRIM67Q6ZTA4 783 aa10.6□□□□□ -0.71
RFC1-215ENST00000512881 ANKRD30AQ9BXX3 1397 aa10.6□□□□□ -0.71
RFC1-215ENST00000512881 NLRP1Q9C000 1473 aa10.6□□□□□ -0.71
RFC1-215ENST00000512881 DNMT1P26358 1616 aaKnown RBP10.59□□□□□ -0.71
RFC1-215ENST00000512881 UBAP1LF5GYI3 381 aa10.59□□□□□ -0.71
RFC1-215ENST00000512881 SHANK2Q9UPX8 1470 aa10.59□□□□□ -0.71
RFC1-215ENST00000512881 ERBINQ96RT1 1412 aa10.58□□□□□ -0.72
RFC1-215ENST00000512881 PTPN23Q9H3S7 1636 aa10.58□□□□□ -0.72
RFC1-215ENST00000512881 ZNF142P52746 1687 aaPredicted RBP10.58□□□□□ -0.72
RFC1-215ENST00000512881 TTLL12Q14166 644 aaPredicted RBP10.58□□□□□ -0.72
RFC1-215ENST00000512881 FCF1Q9Y324 198 aaKnown RBP10.58□□□□□ -0.72
RFC1-215ENST00000512881 ERVK-7P63135 1459 aa10.57□□□□□ -0.72
RFC1-215ENST00000512881 IQSEC2Q5JU85 1478 aa10.57□□□□□ -0.72
RFC1-215ENST00000512881 KANK1Q14678 1352 aa10.57□□□□□ -0.72
RFC1-215ENST00000512881 GUCA2AQ02747 115 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms