RNA–Protein interactions for RNA: ENST00000512648.5

SPOCK3-221, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 1 (best) BASIC

Gene SPOCK3, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-221ENST00000512648 AMPHP49418 695 aa31.84■■■□□ 2.69
SPOCK3-221ENST00000512648 IL16Q14005 1332 aa31.84■■■□□ 2.69
SPOCK3-221ENST00000512648 TRPM3Q9HCF6 1732 aaPredicted RBP31.84■■■□□ 2.69
SPOCK3-221ENST00000512648 NEUROD2Q15784 382 aa31.84■■■□□ 2.69
SPOCK3-221ENST00000512648 TRIM35Q9UPQ4 493 aa31.83■■■□□ 2.69
SPOCK3-221ENST00000512648 XIRP1Q702N8 1843 aaKnown RBP31.83■■■□□ 2.69
SPOCK3-221ENST00000512648 USP19O94966 1318 aa31.82■■■□□ 2.68
SPOCK3-221ENST00000512648 ARHGEF10O15013 1369 aa31.81■■■□□ 2.68
SPOCK3-221ENST00000512648 NUTM2GQ5VZR2 741 aa31.81■■■□□ 2.68
SPOCK3-221ENST00000512648 NPHP3Q7Z494 1330 aa31.81■■■□□ 2.68
SPOCK3-221ENST00000512648 SLIT3O75094 1523 aa31.81■■■□□ 2.68
SPOCK3-221ENST00000512648 NFAT5O94916 1531 aa31.81■■■□□ 2.68
SPOCK3-221ENST00000512648 RIPK4P57078 832 aa31.8■■■□□ 2.68
SPOCK3-221ENST00000512648 NFE2L2Q16236 605 aa31.8■■■□□ 2.68
SPOCK3-221ENST00000512648 HMOX1P09601 288 aa31.79■■■□□ 2.68
SPOCK3-221ENST00000512648 HOXC9P31274 260 aa31.79■■■□□ 2.68
SPOCK3-221ENST00000512648 RGPD1P0DJD0 1748 aa31.79■■■□□ 2.68
SPOCK3-221ENST00000512648 RRP1P56182 461 aaKnown RBP31.78■■■□□ 2.68
SPOCK3-221ENST00000512648 SOX12O15370 315 aa31.78■■■□□ 2.68
SPOCK3-221ENST00000512648 IP6K1Q92551 441 aa31.78■■■□□ 2.68
SPOCK3-221ENST00000512648 PHACTR3Q96KR7 559 aa31.78■■■□□ 2.68
SPOCK3-221ENST00000512648 MYH16Q9H6N6 1097 aa31.77■■■□□ 2.68
SPOCK3-221ENST00000512648 IGSF1Q8N6C5 1336 aa31.75■■■□□ 2.67
SPOCK3-221ENST00000512648 KDRP35968 1356 aa31.75■■■□□ 2.67
SPOCK3-221ENST00000512648 PHRF1Q9P1Y6 1649 aaKnown RBP31.75■■■□□ 2.67
SPOCK3-221ENST00000512648 GCP02774 474 aa31.74■■■□□ 2.67
SPOCK3-221ENST00000512648 SULT6B1Q6IMI4 303 aa31.74■■■□□ 2.67
SPOCK3-221ENST00000512648 LMOD3Q0VAK6 560 aa31.72■■■□□ 2.67
SPOCK3-221ENST00000512648 XPCQ01831 940 aaPredicted RBP31.72■■■□□ 2.67
SPOCK3-221ENST00000512648 ARHGEF25Q86VW2 580 aa31.72■■■□□ 2.67
SPOCK3-221ENST00000512648 SLAIN2Q9P270 581 aa31.72■■■□□ 2.67
SPOCK3-221ENST00000512648 ALS2Q96Q42 1657 aa31.71■■■□□ 2.67
SPOCK3-221ENST00000512648 CALD1Q05682 793 aaKnown RBP31.71■■■□□ 2.67
SPOCK3-221ENST00000512648 BRINP3Q76B58 766 aa31.71■■■□□ 2.67
SPOCK3-221ENST00000512648 EYA1Q99502 592 aa31.7■■■□□ 2.66
SPOCK3-221ENST00000512648 PPP4R2Q9NY27 417 aa31.7■■■□□ 2.66
SPOCK3-221ENST00000512648 PXDNQ92626 1479 aa31.7■■■□□ 2.66
SPOCK3-221ENST00000512648 CT47B1P0C2W7 299 aaPredicted RBP31.69■■■□□ 2.66
SPOCK3-221ENST00000512648 IRX6P78412 446 aaPredicted RBP31.69■■■□□ 2.66
SPOCK3-221ENST00000512648 AEBP1Q8IUX7 1158 aa31.67■■■□□ 2.66
SPOCK3-221ENST00000512648 TNS3Q68CZ2 1445 aa31.66■■■□□ 2.66
SPOCK3-221ENST00000512648 SPATA31A3Q5VYP0 1347 aa31.65■■■□□ 2.66
SPOCK3-221ENST00000512648 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.63■■■□□ 2.65
SPOCK3-221ENST00000512648 SOS2Q07890 1332 aaPredicted RBP31.62■■■□□ 2.65
SPOCK3-221ENST00000512648 LMOD2Q6P5Q4 547 aa31.61■■■□□ 2.65
SPOCK3-221ENST00000512648 LTN1O94822 1766 aa31.6■■■□□ 2.65
SPOCK3-221ENST00000512648 FANCIQ9NVI1 1328 aa31.59■■■□□ 2.65
SPOCK3-221ENST00000512648 MED1Q15648 1581 aaPredicted RBP31.59■■■□□ 2.65
SPOCK3-221ENST00000512648 ZNF853P0CG23 659 aa31.58■■■□□ 2.65
SPOCK3-221ENST00000512648 DDX17Q92841 729 aaKnown RBP31.58■■■□□ 2.65
SPOCK3-221ENST00000512648 IFT57Q9NWB7 429 aa31.58■■■□□ 2.65
SPOCK3-221ENST00000512648 HTATSF1O43719 755 aaKnown RBP31.55■■■□□ 2.64
SPOCK3-221ENST00000512648 GNAI1P63096 354 aa31.55■■■□□ 2.64
SPOCK3-221ENST00000512648 GAS2L2Q8NHY3 880 aa31.55■■■□□ 2.64
SPOCK3-221ENST00000512648 NCAPD2Q15021 1401 aa31.54■■■□□ 2.64
SPOCK3-221ENST00000512648 ABCC6O95255 1503 aa31.53■■■□□ 2.64
SPOCK3-221ENST00000512648 RARSP54136 660 aaKnown RBP31.52■■■□□ 2.64
SPOCK3-221ENST00000512648 CFAP44Q96MT7 982 aa31.52■■■□□ 2.64
SPOCK3-221ENST00000512648 CPDO75976 1380 aa31.51■■■□□ 2.63
SPOCK3-221ENST00000512648 ZNF428Q96B54 188 aa31.51■■■□□ 2.63
SPOCK3-221ENST00000512648 MTHFSDQ2M296 383 aaKnown RBP31.5■■■□□ 2.63
SPOCK3-221ENST00000512648 LTBP4Q8N2S1 1624 aa31.5■■■□□ 2.63
SPOCK3-221ENST00000512648 TSR2Q969E8 191 aaKnown RBP31.49■■■□□ 2.63
SPOCK3-221ENST00000512648 LTV1Q96GA3 475 aaPredicted RBP31.49■■■□□ 2.63
SPOCK3-221ENST00000512648 PLIN1O60240 522 aa31.48■■■□□ 2.63
SPOCK3-221ENST00000512648 EXOSC9Q06265 439 aaKnown RBP31.48■■■□□ 2.63
SPOCK3-221ENST00000512648 NBPF6Q5VWK0 638 aa31.48■■■□□ 2.63
SPOCK3-221ENST00000512648 NBPF4Q96M43 638 aa31.48■■■□□ 2.63
SPOCK3-221ENST00000512648 BCAR3O75815 825 aa31.47■■■□□ 2.63
SPOCK3-221ENST00000512648 PELP1Q8IZL8 1130 aaKnown RBP31.47■■■□□ 2.63
SPOCK3-221ENST00000512648 PDE3AQ14432 1141 aa31.46■■■□□ 2.63
SPOCK3-221ENST00000512648 ANKRD24Q8TF21 1146 aa31.46■■■□□ 2.63
SPOCK3-221ENST00000512648 DLG5Q8TDM6 1919 aa31.45■■■□□ 2.63
SPOCK3-221ENST00000512648 AXIN2Q9Y2T1 843 aa31.45■■■□□ 2.62
SPOCK3-221ENST00000512648 CRYBG1Q9Y4K1 1723 aa31.44■■■□□ 2.62
SPOCK3-221ENST00000512648 EXOC6Q8TAG9 804 aa31.43■■■□□ 2.62
SPOCK3-221ENST00000512648 THUMPD2Q9BTF0 503 aaKnown RBP31.43■■■□□ 2.62
SPOCK3-221ENST00000512648 NHSL1Q5SYE7 1610 aa31.42■■■□□ 2.62
SPOCK3-221ENST00000512648 FAM83GA6ND36 823 aa31.42■■■□□ 2.62
SPOCK3-221ENST00000512648 ZC3H6P61129 1189 aaKnown RBP31.42■■■□□ 2.62
SPOCK3-221ENST00000512648 CHL1O00533 1208 aa31.41■■■□□ 2.62
SPOCK3-221ENST00000512648 CAMTA1Q9Y6Y1 1673 aa31.41■■■□□ 2.62
SPOCK3-221ENST00000512648 ERBB3P21860 1342 aa31.41■■■□□ 2.62
SPOCK3-221ENST00000512648 PLEKHG2Q9H7P9 1386 aa31.4■■■□□ 2.62
SPOCK3-221ENST00000512648 ZBTB7CA1YPR0 619 aa31.4■■■□□ 2.62
SPOCK3-221ENST00000512648 RTF1Q92541 710 aaKnown RBP31.4■■■□□ 2.62
SPOCK3-221ENST00000512648 MBIPQ9NS73 344 aa31.4■■■□□ 2.62
SPOCK3-221ENST00000512648 CRB1P82279 1406 aa31.4■■■□□ 2.62
SPOCK3-221ENST00000512648 BRPF1P55201 1214 aaPredicted RBP31.4■■■□□ 2.62
SPOCK3-221ENST00000512648 ALDH1L2Q3SY69 923 aa31.4■■■□□ 2.62
SPOCK3-221ENST00000512648 COL18A1P39060 1754 aa31.39■■■□□ 2.62
SPOCK3-221ENST00000512648 GNAT3A8MTJ3 354 aa31.38■■■□□ 2.61
SPOCK3-221ENST00000512648 DCTN1Q14203 1278 aa31.37■■■□□ 2.61
SPOCK3-221ENST00000512648 AMOTQ4VCS5 1084 aa31.37■■■□□ 2.61
SPOCK3-221ENST00000512648 C20orf194Q5TEA3 1177 aa31.37■■■□□ 2.61
SPOCK3-221ENST00000512648 CRBNQ96SW2 442 aa31.37■■■□□ 2.61
SPOCK3-221ENST00000512648 CABLES1Q8TDN4 633 aa31.36■■■□□ 2.61
SPOCK3-221ENST00000512648 BABAM1Q9NWV8 329 aa31.36■■■□□ 2.61
SPOCK3-221ENST00000512648 LAS1LQ9Y4W2 734 aaKnown RBP31.36■■■□□ 2.61
SPOCK3-221ENST00000512648 LMO7Q8WWI1 1683 aa31.35■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms