RNA–Protein interactions for RNA: ENST00000512454.5

EXOSC9-211, Transcript of exosome component 9, humanhuman

TSL 1 (best) BASIC

Gene EXOSC9, Length 1,543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-211ENST00000512454 NSD3Q9BZ95 1437 aa11.86□□□□□ -0.51
EXOSC9-211ENST00000512454 PROSER2Q86WR7 435 aaPredicted RBP11.86□□□□□ -0.51
EXOSC9-211ENST00000512454 NUDT16Q96DE0 195 aaKnown RBP11.86□□□□□ -0.51
EXOSC9-211ENST00000512454 PRKRIP1Q9H875 184 aaPredicted RBP11.86□□□□□ -0.51
EXOSC9-211ENST00000512454 TERF2IPQ9NYB0 399 aa11.86□□□□□ -0.51
EXOSC9-211ENST00000512454 PRR36Q9H6K5 1346 aa11.86□□□□□ -0.51
EXOSC9-211ENST00000512454 CPSF1Q10570 1443 aaKnown RBP11.86□□□□□ -0.51
EXOSC9-211ENST00000512454 KIF1AQ12756 1690 aa11.85□□□□□ -0.51
EXOSC9-211ENST00000512454 LRRC7Q96NW7 1537 aa11.85□□□□□ -0.51
EXOSC9-211ENST00000512454 CARD14Q9BXL6 1004 aa11.85□□□□□ -0.51
EXOSC9-211ENST00000512454 CABP1Q9NZU7 370 aa11.85□□□□□ -0.51
EXOSC9-211ENST00000512454 BOLA1Q9Y3E2 137 aa11.85□□□□□ -0.51
EXOSC9-211ENST00000512454 TMEM94Q12767 1356 aa11.85□□□□□ -0.51
EXOSC9-211ENST00000512454 PARD3Q8TEW0 1356 aa11.85□□□□□ -0.51
EXOSC9-211ENST00000512454 C14orf37Q86TY3 774 aa11.84□□□□□ -0.51
EXOSC9-211ENST00000512454 MARVELD3Q96A59 401 aa11.84□□□□□ -0.51
EXOSC9-211ENST00000512454 ZNF335Q9H4Z2 1342 aaPredicted RBP11.83□□□□□ -0.51
EXOSC9-211ENST00000512454 NSD2O96028 1365 aa11.83□□□□□ -0.52
EXOSC9-211ENST00000512454 HDGFL2Q7Z4V5 671 aaPredicted RBP11.83□□□□□ -0.52
EXOSC9-211ENST00000512454 RBM33Q96EV2 1170 aaKnown RBP11.83□□□□□ -0.52
EXOSC9-211ENST00000512454 EDC4Q6P2E9 1401 aaKnown RBP11.83□□□□□ -0.52
EXOSC9-211ENST00000512454 CGNL1Q0VF96 1302 aa11.83□□□□□ -0.52
EXOSC9-211ENST00000512454 POLR3AO14802 1390 aaPredicted RBP11.82□□□□□ -0.52
EXOSC9-211ENST00000512454 CCER2I3L3R5 266 aa11.82□□□□□ -0.52
EXOSC9-211ENST00000512454 RALBP1Q15311 655 aa11.82□□□□□ -0.52
EXOSC9-211ENST00000512454 EFCAB3Q8N7B9 438 aa11.82□□□□□ -0.52
EXOSC9-211ENST00000512454 C19orf44Q9H6X5 657 aa11.82□□□□□ -0.52
EXOSC9-211ENST00000512454 PLEKHG3A1L390 1219 aa11.81□□□□□ -0.52
EXOSC9-211ENST00000512454 MSH6P52701 1360 aa11.81□□□□□ -0.52
EXOSC9-211ENST00000512454 NUTM2FA1L443 756 aa11.81□□□□□ -0.52
EXOSC9-211ENST00000512454 CC2D1BQ5T0F9 858 aaKnown RBP11.81□□□□□ -0.52
EXOSC9-211ENST00000512454 USP54Q70EL1 1684 aa11.8□□□□□ -0.52
EXOSC9-211ENST00000512454 MAP2P11137 1827 aaKnown RBP11.8□□□□□ -0.52
EXOSC9-211ENST00000512454 G3V3G9 751 aa11.8□□□□□ -0.52
EXOSC9-211ENST00000512454 USP6P35125 1406 aa11.8□□□□□ -0.52
EXOSC9-211ENST00000512454 LTBP4Q8N2S1 1624 aa11.79□□□□□ -0.52
EXOSC9-211ENST00000512454 MYBBP1AQ9BQG0 1328 aaKnown RBP11.79□□□□□ -0.52
EXOSC9-211ENST00000512454 MST1RQ04912 1400 aa11.79□□□□□ -0.52
EXOSC9-211ENST00000512454 RIOK3O14730 519 aaKnown RBP11.79□□□□□ -0.52
EXOSC9-211ENST00000512454 RNF25Q96BH1 459 aaPredicted RBP11.79□□□□□ -0.52
EXOSC9-211ENST00000512454 PIK3C2AO00443 1686 aa11.79□□□□□ -0.52
EXOSC9-211ENST00000512454 ACEP12821 1306 aa11.79□□□□□ -0.52
EXOSC9-211ENST00000512454 ATF3P18847 181 aa11.78□□□□□ -0.52
EXOSC9-211ENST00000512454 CNGB1Q14028 1251 aaPredicted RBP11.78□□□□□ -0.52
EXOSC9-211ENST00000512454 C1orf167Q5SNV9 1468 aa11.78□□□□□ -0.52
EXOSC9-211ENST00000512454 MARF1Q9Y4F3 1742 aaKnown RBP11.78□□□□□ -0.52
EXOSC9-211ENST00000512454 TRPM3Q9HCF6 1732 aaPredicted RBP11.77□□□□□ -0.52
EXOSC9-211ENST00000512454 CADPS2Q86UW7 1296 aa11.77□□□□□ -0.52
EXOSC9-211ENST00000512454 SSH2Q76I76 1423 aa11.77□□□□□ -0.53
EXOSC9-211ENST00000512454 BRD4O60885 1362 aaPredicted RBP11.76□□□□□ -0.53
EXOSC9-211ENST00000512454 NLRP13Q86W25 1043 aa11.76□□□□□ -0.53
EXOSC9-211ENST00000512454 NGDNQ8NEJ9 315 aaKnown RBP11.76□□□□□ -0.53
EXOSC9-211ENST00000512454 PHF8Q9UPP1 1060 aa11.76□□□□□ -0.53
EXOSC9-211ENST00000512454 FYB1O15117 783 aa11.75□□□□□ -0.53
EXOSC9-211ENST00000512454 PMFBP1Q8TBY8 1022 aa11.75□□□□□ -0.53
EXOSC9-211ENST00000512454 ESCO1Q5FWF5 840 aa11.74□□□□□ -0.53
EXOSC9-211ENST00000512454 ALS2Q96Q42 1657 aa11.74□□□□□ -0.53
EXOSC9-211ENST00000512454 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.73□□□□□ -0.53
EXOSC9-211ENST00000512454 EMP3P54852 163 aa11.73□□□□□ -0.53
EXOSC9-211ENST00000512454 MORC1Q86VD1 984 aa11.73□□□□□ -0.53
EXOSC9-211ENST00000512454 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.73□□□□□ -0.53
EXOSC9-211ENST00000512454 ZFP91Q96JP5 570 aaPredicted RBP11.73□□□□□ -0.53
EXOSC9-211ENST00000512454 MRS2Q9HD23 443 aa11.73□□□□□ -0.53
EXOSC9-211ENST00000512454 TTC21AQ8NDW8 1320 aa11.73□□□□□ -0.53
EXOSC9-211ENST00000512454 NHSL1Q5SYE7 1610 aa11.72□□□□□ -0.53
EXOSC9-211ENST00000512454 OVOS2A0A0J9YW53 1432 aa11.72□□□□□ -0.53
EXOSC9-211ENST00000512454 OVOS2Q6IE36 1432 aa11.72□□□□□ -0.53
EXOSC9-211ENST00000512454 TTC21BQ7Z4L5 1316 aa11.72□□□□□ -0.53
EXOSC9-211ENST00000512454 SOX12O15370 315 aa11.72□□□□□ -0.53
EXOSC9-211ENST00000512454 HOXB3P14651 431 aaPredicted RBP11.72□□□□□ -0.53
EXOSC9-211ENST00000512454 PPP2R1AP30153 589 aa11.72□□□□□ -0.53
EXOSC9-211ENST00000512454 GGNBP2Q9H3C7 697 aa11.72□□□□□ -0.53
EXOSC9-211ENST00000512454 CCDC184Q52MB2 194 aa11.71□□□□□ -0.53
EXOSC9-211ENST00000512454 ORAI2Q96SN7 254 aa11.71□□□□□ -0.53
EXOSC9-211ENST00000512454 SHPRHQ149N8 1683 aa11.71□□□□□ -0.53
EXOSC9-211ENST00000512454 LTN1O94822 1766 aa11.7□□□□□ -0.54
EXOSC9-211ENST00000512454 ROBO1Q9Y6N7 1651 aa11.7□□□□□ -0.54
EXOSC9-211ENST00000512454 POTEB3A0JP26 581 aa11.7□□□□□ -0.54
EXOSC9-211ENST00000512454 POTEBQ6S5H4 581 aa11.7□□□□□ -0.54
EXOSC9-211ENST00000512454 NME9Q86XW9 330 aa11.7□□□□□ -0.54
EXOSC9-211ENST00000512454 USP31Q70CQ4 1352 aa11.69□□□□□ -0.54
EXOSC9-211ENST00000512454 PSME1Q06323 249 aa11.69□□□□□ -0.54
EXOSC9-211ENST00000512454 SPNS2Q8IVW8 549 aa11.69□□□□□ -0.54
EXOSC9-211ENST00000512454 COG3Q96JB2 828 aa11.69□□□□□ -0.54
EXOSC9-211ENST00000512454 SLAIN2Q9P270 581 aa11.69□□□□□ -0.54
EXOSC9-211ENST00000512454 PXDNQ92626 1479 aa11.69□□□□□ -0.54
EXOSC9-211ENST00000512454 AATKQ6ZMQ8 1374 aa11.68□□□□□ -0.54
EXOSC9-211ENST00000512454 FOXO3O43524 673 aa11.68□□□□□ -0.54
EXOSC9-211ENST00000512454 TNNT2P45379 298 aaPredicted RBP11.68□□□□□ -0.54
EXOSC9-211ENST00000512454 SMG6Q86US8 1419 aaKnown RBP11.68□□□□□ -0.54
EXOSC9-211ENST00000512454 NPHP3Q7Z494 1330 aa11.67□□□□□ -0.54
EXOSC9-211ENST00000512454 CRYBG1Q9Y4K1 1723 aa11.67□□□□□ -0.54
EXOSC9-211ENST00000512454 IQSEC2Q5JU85 1478 aa11.67□□□□□ -0.54
EXOSC9-211ENST00000512454 FAM205CA6NFA0 338 aa11.67□□□□□ -0.54
EXOSC9-211ENST00000512454 MS4A4AQ96JQ5 239 aa11.67□□□□□ -0.54
EXOSC9-211ENST00000512454 HS3ST6Q96QI5 342 aa11.67□□□□□ -0.54
EXOSC9-211ENST00000512454 PHRF1Q9P1Y6 1649 aaKnown RBP11.67□□□□□ -0.54
EXOSC9-211ENST00000512454 CDK12Q9NYV4 1490 aaPredicted RBP11.66□□□□□ -0.54
EXOSC9-211ENST00000512454 BRINP3Q76B58 766 aa11.66□□□□□ -0.54
EXOSC9-211ENST00000512454 MICALL2Q8IY33 904 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms