RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 RNF123Q5XPI4 1314 aa17.39■□□□□ 0.37
DEPDC1B-206ENST00000512452 CFAP53Q96M91 514 aa17.38■□□□□ 0.37
DEPDC1B-206ENST00000512452 SYT17Q9BSW7 474 aa17.38■□□□□ 0.37
DEPDC1B-206ENST00000512452 NALCNQ8IZF0 1738 aa17.38■□□□□ 0.37
DEPDC1B-206ENST00000512452 XPCQ01831 940 aaPredicted RBP17.37■□□□□ 0.37
DEPDC1B-206ENST00000512452 UTRNP46939 3433 aa17.37■□□□□ 0.37
DEPDC1B-206ENST00000512452 ROBO2Q9HCK4 1378 aa17.36■□□□□ 0.37
DEPDC1B-206ENST00000512452 CPSF1Q10570 1443 aaKnown RBP17.36■□□□□ 0.37
DEPDC1B-206ENST00000512452 NRKQ7Z2Y5 1582 aa17.36■□□□□ 0.37
DEPDC1B-206ENST00000512452 CABP1Q9NZU7 370 aa17.35■□□□□ 0.37
DEPDC1B-206ENST00000512452 EDC4Q6P2E9 1401 aaKnown RBP17.35■□□□□ 0.37
DEPDC1B-206ENST00000512452 CDC42BPGQ6DT37 1551 aa17.35■□□□□ 0.37
DEPDC1B-206ENST00000512452 NUP188Q5SRE5 1749 aa17.35■□□□□ 0.37
DEPDC1B-206ENST00000512452 KIF20BQ96Q89 1820 aa17.35■□□□□ 0.37
DEPDC1B-206ENST00000512452 NCBP3Q53F19 620 aaKnown RBP17.34■□□□□ 0.37
DEPDC1B-206ENST00000512452 COL13A1Q5TAT6 717 aaPredicted RBP17.34■□□□□ 0.37
DEPDC1B-206ENST00000512452 PXDNQ92626 1479 aa17.34■□□□□ 0.37
DEPDC1B-206ENST00000512452 RREB1Q92766 1687 aa17.34■□□□□ 0.37
DEPDC1B-206ENST00000512452 FHDC1Q9C0D6 1143 aaPredicted RBP17.34■□□□□ 0.37
DEPDC1B-206ENST00000512452 PPIP5K1Q6PFW1 1433 aa17.33■□□□□ 0.36
DEPDC1B-206ENST00000512452 FOXO3O43524 673 aa17.33■□□□□ 0.36
DEPDC1B-206ENST00000512452 HAP1P54257 671 aaPredicted RBP17.33■□□□□ 0.36
DEPDC1B-206ENST00000512452 CCDC61Q9Y6R9 512 aa17.33■□□□□ 0.36
DEPDC1B-206ENST00000512452 FYB1O15117 783 aa17.32■□□□□ 0.36
DEPDC1B-206ENST00000512452 ESCO1Q5FWF5 840 aa17.32■□□□□ 0.36
DEPDC1B-206ENST00000512452 FAM196AQ6ZSG2 479 aa17.32■□□□□ 0.36
DEPDC1B-206ENST00000512452 ZNF521Q96K83 1311 aa17.31■□□□□ 0.36
DEPDC1B-206ENST00000512452 NUDT16Q96DE0 195 aaKnown RBP17.31■□□□□ 0.36
DEPDC1B-206ENST00000512452 ZNF692Q9BU19 519 aaPredicted RBP17.31■□□□□ 0.36
DEPDC1B-206ENST00000512452 MON2Q7Z3U7 1717 aa17.3■□□□□ 0.36
DEPDC1B-206ENST00000512452 NWD2Q9ULI1 1742 aa17.3■□□□□ 0.36
DEPDC1B-206ENST00000512452 TOPAZ1Q8N9V7 1692 aa17.3■□□□□ 0.36
DEPDC1B-206ENST00000512452 PTGER2P43116 358 aa17.3■□□□□ 0.36
DEPDC1B-206ENST00000512452 MTHFSP49914 203 aa17.3■□□□□ 0.36
DEPDC1B-206ENST00000512452 AKAP12Q02952 1782 aa17.3■□□□□ 0.36
DEPDC1B-206ENST00000512452 ADRA2BP18089 450 aa17.29■□□□□ 0.36
DEPDC1B-206ENST00000512452 TNS4Q8IZW8 715 aa17.29■□□□□ 0.36
DEPDC1B-206ENST00000512452 ITSN1Q15811 1721 aa17.28■□□□□ 0.36
DEPDC1B-206ENST00000512452 ZBTB7AO95365 584 aa17.28■□□□□ 0.36
DEPDC1B-206ENST00000512452 GPR162Q16538 588 aa17.28■□□□□ 0.36
DEPDC1B-206ENST00000512452 PLCH1Q4KWH8 1693 aa17.28■□□□□ 0.36
DEPDC1B-206ENST00000512452 PLEKHG3A1L390 1219 aa17.27■□□□□ 0.36
DEPDC1B-206ENST00000512452 COL3A1P02461 1466 aaPredicted RBP17.26■□□□□ 0.35
DEPDC1B-206ENST00000512452 RUNDC1Q96C34 613 aa17.26■□□□□ 0.35
DEPDC1B-206ENST00000512452 GGNBP2Q9H3C7 697 aa17.26■□□□□ 0.35
DEPDC1B-206ENST00000512452 PPP4R2Q9NY27 417 aa17.26■□□□□ 0.35
DEPDC1B-206ENST00000512452 ATF5Q9Y2D1 282 aaPredicted RBP17.26■□□□□ 0.35
DEPDC1B-206ENST00000512452 SHANK3Q9BYB0 1731 aa17.26■□□□□ 0.35
DEPDC1B-206ENST00000512452 SPATA31A3Q5VYP0 1347 aa17.25■□□□□ 0.35
DEPDC1B-206ENST00000512452 GOLGA2Q08379 1002 aa17.25■□□□□ 0.35
DEPDC1B-206ENST00000512452 RCAN3Q9UKA8 241 aa17.25■□□□□ 0.35
DEPDC1B-206ENST00000512452 AATKQ6ZMQ8 1374 aa17.25■□□□□ 0.35
DEPDC1B-206ENST00000512452 ANKARQ7Z5J8 1434 aa17.24■□□□□ 0.35
DEPDC1B-206ENST00000512452 TNNT2P45379 298 aaPredicted RBP17.24■□□□□ 0.35
DEPDC1B-206ENST00000512452 CABLES1Q8TDN4 633 aa17.24■□□□□ 0.35
DEPDC1B-206ENST00000512452 PRR36Q9H6K5 1346 aa17.23■□□□□ 0.35
DEPDC1B-206ENST00000512452 PDGFDQ9GZP0 370 aaPredicted RBP17.23■□□□□ 0.35
DEPDC1B-206ENST00000512452 APAF1O14727 1248 aa17.22■□□□□ 0.35
DEPDC1B-206ENST00000512452 PLEKHG5O94827 1062 aa17.22■□□□□ 0.35
DEPDC1B-206ENST00000512452 TRMT2AQ8IZ69 625 aaKnown RBP17.22■□□□□ 0.35
DEPDC1B-206ENST00000512452 SALL2Q9Y467 1007 aaPredicted RBP17.22■□□□□ 0.35
DEPDC1B-206ENST00000512452 CCDC27Q2M243 656 aa17.21■□□□□ 0.35
DEPDC1B-206ENST00000512452 CDCA7LQ96GN5 454 aa17.21■□□□□ 0.35
DEPDC1B-206ENST00000512452 PNNQ9H307 717 aaKnown RBP17.21■□□□□ 0.35
DEPDC1B-206ENST00000512452 E9PSI1 815 aa17.2■□□□□ 0.34
DEPDC1B-206ENST00000512452 RRP1P56182 461 aaKnown RBP17.2■□□□□ 0.34
DEPDC1B-206ENST00000512452 SLFN5Q08AF3 891 aa17.2■□□□□ 0.34
DEPDC1B-206ENST00000512452 CCDC146Q8IYE0 955 aa17.2■□□□□ 0.34
DEPDC1B-206ENST00000512452 CASZ1Q86V15 1759 aa17.2■□□□□ 0.34
DEPDC1B-206ENST00000512452 DUSP27Q5VZP5 1158 aa17.19■□□□□ 0.34
DEPDC1B-206ENST00000512452 BTG4Q9NY30 223 aa17.19■□□□□ 0.34
DEPDC1B-206ENST00000512452 SPATA31A5Q5VU36 1347 aa17.19■□□□□ 0.34
DEPDC1B-206ENST00000512452 SPATA31A7Q8IWB4 1347 aa17.19■□□□□ 0.34
DEPDC1B-206ENST00000512452 COG3Q96JB2 828 aa17.18■□□□□ 0.34
DEPDC1B-206ENST00000512452 USP6P35125 1406 aa17.18■□□□□ 0.34
DEPDC1B-206ENST00000512452 THSD7AQ9UPZ6 1657 aa17.17■□□□□ 0.34
DEPDC1B-206ENST00000512452 DIAPH1O60610 1272 aaKnown RBP17.17■□□□□ 0.34
DEPDC1B-206ENST00000512452 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.17■□□□□ 0.341e-6■□□□□ 9.3
DEPDC1B-206ENST00000512452 DNAJC5GQ8N7S2 189 aa17.17■□□□□ 0.34
DEPDC1B-206ENST00000512452 TTC21AQ8NDW8 1320 aa17.17■□□□□ 0.34
DEPDC1B-206ENST00000512452 SSH2Q76I76 1423 aa17.16■□□□□ 0.34
DEPDC1B-206ENST00000512452 U2AF1L5P0DN76 240 aaPredicted RBP17.16■□□□□ 0.34
DEPDC1B-206ENST00000512452 IRX6P78412 446 aaPredicted RBP17.16■□□□□ 0.34
DEPDC1B-206ENST00000512452 U2AF1Q01081 240 aaKnown RBP eCLIP17.16■□□□□ 0.34
DEPDC1B-206ENST00000512452 WDR63Q8IWG1 891 aa17.16■□□□□ 0.34
DEPDC1B-206ENST00000512452 GPBP1L1Q9HC44 474 aaPredicted RBP17.16■□□□□ 0.34
DEPDC1B-206ENST00000512452 ANO8Q9HCE9 1232 aaPredicted RBP17.16■□□□□ 0.34
DEPDC1B-206ENST00000512452 ACEP12821 1306 aa17.16■□□□□ 0.34
DEPDC1B-206ENST00000512452 TTC21BQ7Z4L5 1316 aa17.16■□□□□ 0.34
DEPDC1B-206ENST00000512452 FMN2Q9NZ56 1722 aa17.16■□□□□ 0.34
DEPDC1B-206ENST00000512452 APLP1P51693 650 aa17.15■□□□□ 0.34
DEPDC1B-206ENST00000512452 TCP11L2Q8N4U5 519 aa17.15■□□□□ 0.34
DEPDC1B-206ENST00000512452 POLKQ9UBT6 870 aa17.15■□□□□ 0.34
DEPDC1B-206ENST00000512452 NRAPQ86VF7 1730 aa17.14■□□□□ 0.33
DEPDC1B-206ENST00000512452 KRT28Q7Z3Y7 464 aa17.14■□□□□ 0.33
DEPDC1B-206ENST00000512452 NME9Q86XW9 330 aa17.14■□□□□ 0.33
DEPDC1B-206ENST00000512452 WWC1Q8IX03 1113 aa17.14■□□□□ 0.33
DEPDC1B-206ENST00000512452 OVOS2A0A0J9YW53 1432 aa17.13■□□□□ 0.33
DEPDC1B-206ENST00000512452 OVOS2Q6IE36 1432 aa17.13■□□□□ 0.33
DEPDC1B-206ENST00000512452 FCHSD2O94868 740 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms