RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 PRR36Q9H6K5 1346 aa12.26□□□□□ -0.45
NR1I3-228ENST00000511676 NRKQ7Z2Y5 1582 aa12.26□□□□□ -0.45
NR1I3-228ENST00000511676 CABLES1Q8TDN4 633 aa12.25□□□□□ -0.45
NR1I3-228ENST00000511676 CC2D1BQ5T0F9 858 aaKnown RBP12.24□□□□□ -0.45
NR1I3-228ENST00000511676 SPATA31A5Q5VU36 1347 aa12.24□□□□□ -0.45
NR1I3-228ENST00000511676 SPATA31A7Q8IWB4 1347 aa12.24□□□□□ -0.45
NR1I3-228ENST00000511676 KIF20BQ96Q89 1820 aa12.23□□□□□ -0.45
NR1I3-228ENST00000511676 USP6P35125 1406 aa12.23□□□□□ -0.45
NR1I3-228ENST00000511676 TTC21AQ8NDW8 1320 aa12.23□□□□□ -0.45
NR1I3-228ENST00000511676 MYCNP04198 464 aaPredicted RBP12.23□□□□□ -0.45
NR1I3-228ENST00000511676 PPP2R1AP30153 589 aa12.23□□□□□ -0.45
NR1I3-228ENST00000511676 BARGINQ6ZT62 677 aa12.23□□□□□ -0.45
NR1I3-228ENST00000511676 SSH2Q76I76 1423 aa12.22□□□□□ -0.45
NR1I3-228ENST00000511676 DEFB132Q7Z7B7 95 aa12.22□□□□□ -0.45
NR1I3-228ENST00000511676 MORC1Q86VD1 984 aa12.22□□□□□ -0.45
NR1I3-228ENST00000511676 ABTB2Q8N961 1025 aa12.22□□□□□ -0.45
NR1I3-228ENST00000511676 PNISRQ8TF01 805 aaKnown RBP12.22□□□□□ -0.45
NR1I3-228ENST00000511676 PLEKHG5O94827 1062 aa12.21□□□□□ -0.45
NR1I3-228ENST00000511676 HMGB2P26583 209 aaKnown RBP12.21□□□□□ -0.45
NR1I3-228ENST00000511676 CDCA7Q9BWT1 371 aaPredicted RBP12.21□□□□□ -0.45
NR1I3-228ENST00000511676 COL14A1Q05707 1796 aaKnown RBP12.2□□□□□ -0.46
NR1I3-228ENST00000511676 AATKQ6ZMQ8 1374 aa12.2□□□□□ -0.46
NR1I3-228ENST00000511676 USP54Q70EL1 1684 aa12.2□□□□□ -0.46
NR1I3-228ENST00000511676 FYB1O15117 783 aa12.2□□□□□ -0.46
NR1I3-228ENST00000511676 EP400Q96L91 3159 aa12.2□□□□□ -0.46
NR1I3-228ENST00000511676 SMG6Q86US8 1419 aaKnown RBP12.2□□□□□ -0.46
NR1I3-228ENST00000511676 ACEP12821 1306 aa12.19□□□□□ -0.46
NR1I3-228ENST00000511676 SPATA31A1Q5TZJ5 1347 aa12.19□□□□□ -0.46
NR1I3-228ENST00000511676 GLI3P10071 1580 aa12.19□□□□□ -0.46
NR1I3-228ENST00000511676 TCP11L2Q8N4U5 519 aa12.19□□□□□ -0.46
NR1I3-228ENST00000511676 DISP2A7MBM2 1401 aa12.19□□□□□ -0.46
NR1I3-228ENST00000511676 USP31Q70CQ4 1352 aa12.18□□□□□ -0.46
NR1I3-228ENST00000511676 APBA3O96018 575 aa12.18□□□□□ -0.46
NR1I3-228ENST00000511676 CCDC184Q52MB2 194 aa12.18□□□□□ -0.46
NR1I3-228ENST00000511676 STRN4Q9NRL3 753 aa12.18□□□□□ -0.46
NR1I3-228ENST00000511676 OVOS2A0A0J9YW53 1432 aa12.18□□□□□ -0.46
NR1I3-228ENST00000511676 OVOS2Q6IE36 1432 aa12.18□□□□□ -0.46
NR1I3-228ENST00000511676 SRCAPQ6ZRS2 3230 aa12.18□□□□□ -0.46
NR1I3-228ENST00000511676 TTC21BQ7Z4L5 1316 aa12.17□□□□□ -0.46
NR1I3-228ENST00000511676 EN1Q05925 392 aaPredicted RBP12.17□□□□□ -0.46
NR1I3-228ENST00000511676 NGEFQ8N5V2 710 aa12.17□□□□□ -0.46
NR1I3-228ENST00000511676 KCNH5Q8NCM2 988 aa12.17□□□□□ -0.46
NR1I3-228ENST00000511676 CFAP53Q96M91 514 aa12.17□□□□□ -0.46
NR1I3-228ENST00000511676 ZBED9Q6R2W3 1325 aa12.16□□□□□ -0.46
NR1I3-228ENST00000511676 PPP1R1BQ9UD71 204 aaPredicted RBP12.16□□□□□ -0.46
NR1I3-228ENST00000511676 CPDO75976 1380 aa12.16□□□□□ -0.46
NR1I3-228ENST00000511676 ZC3H6P61129 1189 aaKnown RBP12.15□□□□□ -0.46
NR1I3-228ENST00000511676 KIF24Q5T7B8 1368 aa12.15□□□□□ -0.46
NR1I3-228ENST00000511676 KIAA0232Q92628 1395 aa12.15□□□□□ -0.46
NR1I3-228ENST00000511676 PLCH1Q4KWH8 1693 aa12.14□□□□□ -0.47
NR1I3-228ENST00000511676 GCP02774 474 aa12.14□□□□□ -0.47
NR1I3-228ENST00000511676 WDR43Q15061 677 aaKnown RBP eCLIP12.14□□□□□ -0.47
NR1I3-228ENST00000511676 FAM9BQ8IZU0 186 aa12.14□□□□□ -0.47
NR1I3-228ENST00000511676 COG3Q96JB2 828 aa12.14□□□□□ -0.47
NR1I3-228ENST00000511676 YTHDC1Q96MU7 727 aaKnown RBP12.14□□□□□ -0.47
NR1I3-228ENST00000511676 U3KPZ7 1027 aaPredicted RBP12.14□□□□□ -0.47
NR1I3-228ENST00000511676 RGPD1P0DJD0 1748 aa12.14□□□□□ -0.47
NR1I3-228ENST00000511676 RGPD8O14715 1765 aaPredicted RBP12.13□□□□□ -0.47
NR1I3-228ENST00000511676 LRP5O75197 1615 aa12.13□□□□□ -0.47
NR1I3-228ENST00000511676 TRIM37O94972 964 aa12.13□□□□□ -0.47
NR1I3-228ENST00000511676 GGNBP2Q9H3C7 697 aa12.13□□□□□ -0.47
NR1I3-228ENST00000511676 SPON1Q9HCB6 807 aa12.13□□□□□ -0.47
NR1I3-228ENST00000511676 USP35Q9P2H5 1018 aa12.13□□□□□ -0.47
NR1I3-228ENST00000511676 PLSCR1O15162 318 aa12.12□□□□□ -0.47
NR1I3-228ENST00000511676 HNRNPUQ00839 825 aaKnown RBP eCLIP12.12□□□□□ -0.47
NR1I3-228ENST00000511676 R3HDM1Q15032 1099 aaKnown RBP12.12□□□□□ -0.47
NR1I3-228ENST00000511676 POTEDQ86YR6 584 aa12.12□□□□□ -0.47
NR1I3-228ENST00000511676 CAMKK2Q96RR4 588 aa12.12□□□□□ -0.47
NR1I3-228ENST00000511676 COL3A1P02461 1466 aaPredicted RBP12.12□□□□□ -0.47
NR1I3-228ENST00000511676 PIK3C2AO00443 1686 aa12.11□□□□□ -0.47
NR1I3-228ENST00000511676 PSDA5PKW4 1024 aaPredicted RBP12.11□□□□□ -0.47
NR1I3-228ENST00000511676 NLRP6P59044 892 aa12.11□□□□□ -0.47
NR1I3-228ENST00000511676 CNGB1Q14028 1251 aaPredicted RBP12.11□□□□□ -0.47
NR1I3-228ENST00000511676 DDB1Q16531 1140 aa12.11□□□□□ -0.47
NR1I3-228ENST00000511676 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.11□□□□□ -0.47
NR1I3-228ENST00000511676 BRWD3Q6RI45 1802 aa12.11□□□□□ -0.47
NR1I3-228ENST00000511676 ALS2Q96Q42 1657 aa12.1□□□□□ -0.47
NR1I3-228ENST00000511676 MTHFSP49914 203 aa12.1□□□□□ -0.47
NR1I3-228ENST00000511676 CHRNA2Q15822 529 aa12.1□□□□□ -0.47
NR1I3-228ENST00000511676 EZH2Q15910 746 aaKnown RBP12.1□□□□□ -0.47
NR1I3-228ENST00000511676 TOM1L2Q6ZVM7 507 aa12.1□□□□□ -0.47
NR1I3-228ENST00000511676 NME9Q86XW9 330 aa12.1□□□□□ -0.47
NR1I3-228ENST00000511676 NUDCQ9Y266 331 aa12.1□□□□□ -0.47
NR1I3-228ENST00000511676 TRPM3Q9HCF6 1732 aaPredicted RBP12.08□□□□□ -0.47
NR1I3-228ENST00000511676 RTL1A6NKG5 1358 aa12.08□□□□□ -0.48
NR1I3-228ENST00000511676 EXOC5O00471 708 aa12.08□□□□□ -0.48
NR1I3-228ENST00000511676 BCL11BQ9C0K0 894 aaPredicted RBP12.08□□□□□ -0.48
NR1I3-228ENST00000511676 POLKQ9UBT6 870 aa12.08□□□□□ -0.48
NR1I3-228ENST00000511676 USP19O94966 1318 aa12.08□□□□□ -0.48
NR1I3-228ENST00000511676 PHRF1Q9P1Y6 1649 aaKnown RBP12.08□□□□□ -0.48
NR1I3-228ENST00000511676 OVOS2A0A0G2JMS6 1433 aa12.07□□□□□ -0.48
NR1I3-228ENST00000511676 KCNQ2O43526 872 aa12.07□□□□□ -0.48
NR1I3-228ENST00000511676 CSB-PGBD3P0DP91 1061 aa12.07□□□□□ -0.48
NR1I3-228ENST00000511676 CRB1P82279 1406 aa12.07□□□□□ -0.48
NR1I3-228ENST00000511676 NUTM2GQ5VZR2 741 aa12.07□□□□□ -0.48
NR1I3-228ENST00000511676 LARP1Q6PKG0 1096 aaKnown RBP12.07□□□□□ -0.48
NR1I3-228ENST00000511676 PNNQ9H307 717 aaKnown RBP12.07□□□□□ -0.48
NR1I3-228ENST00000511676 SLIT3O75094 1523 aa12.06□□□□□ -0.48
NR1I3-228ENST00000511676 NRAPQ86VF7 1730 aa12.06□□□□□ -0.48
NR1I3-228ENST00000511676 ABCA3Q99758 1704 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms