RNA–Protein interactions for RNA: ENST00000511355.5

NME1-209, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 5 BASIC

Gene NME1, Length 1,645 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-209ENST00000511355 KRT28Q7Z3Y7 464 aa18.31■□□□□ 0.52
NME1-209ENST00000511355 MORC1Q86VD1 984 aa18.31■□□□□ 0.52
NME1-209ENST00000511355 GGNBP2Q9H3C7 697 aa18.31■□□□□ 0.52
NME1-209ENST00000511355 SPATA31A3Q5VYP0 1347 aa18.31■□□□□ 0.52
NME1-209ENST00000511355 USP31Q70CQ4 1352 aa18.31■□□□□ 0.52
NME1-209ENST00000511355 XPCQ01831 940 aaPredicted RBP18.31■□□□□ 0.52
NME1-209ENST00000511355 NME9Q86XW9 330 aa18.31■□□□□ 0.52
NME1-209ENST00000511355 ALS2Q96Q42 1657 aa18.29■□□□□ 0.52
NME1-209ENST00000511355 SBNO1A3KN83 1393 aa18.28■□□□□ 0.52
NME1-209ENST00000511355 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.28■□□□□ 0.52
NME1-209ENST00000511355 COG3Q96JB2 828 aa18.28■□□□□ 0.52
NME1-209ENST00000511355 RGS12O14924 1447 aa18.28■□□□□ 0.52
NME1-209ENST00000511355 PPP2R1AP30153 589 aa18.27■□□□□ 0.52
NME1-209ENST00000511355 EXOC6Q8TAG9 804 aa18.27■□□□□ 0.52
NME1-209ENST00000511355 MARF1Q9Y4F3 1742 aaKnown RBP18.27■□□□□ 0.52
NME1-209ENST00000511355 ATRNO75882 1429 aa18.27■□□□□ 0.51
NME1-209ENST00000511355 PAK3O75914 559 aaPredicted RBP18.27■□□□□ 0.51
NME1-209ENST00000511355 WDR43Q15061 677 aaKnown RBP eCLIP18.27■□□□□ 0.51
NME1-209ENST00000511355 ZNF521Q96K83 1311 aa18.26■□□□□ 0.51
NME1-209ENST00000511355 TNS3Q68CZ2 1445 aa18.25■□□□□ 0.51
NME1-209ENST00000511355 HAP1P54257 671 aaPredicted RBP18.25■□□□□ 0.51
NME1-209ENST00000511355 ABTB2Q8N961 1025 aa18.25■□□□□ 0.51
NME1-209ENST00000511355 ZBTB47Q9UFB7 747 aaPredicted RBP18.25■□□□□ 0.51
NME1-209ENST00000511355 AATKQ6ZMQ8 1374 aa18.25■□□□□ 0.51
NME1-209ENST00000511355 ARHGEF10O15013 1369 aa18.24■□□□□ 0.51
NME1-209ENST00000511355 ZRANB1Q9UGI0 708 aa18.23■□□□□ 0.51
NME1-209ENST00000511355 ADAMTS8Q9UP79 889 aa18.23■□□□□ 0.51
NME1-209ENST00000511355 TNNT2P45379 298 aaPredicted RBP18.22■□□□□ 0.51
NME1-209ENST00000511355 NLRP6P59044 892 aa18.22■□□□□ 0.51
NME1-209ENST00000511355 GOLGA2Q08379 1002 aa18.22■□□□□ 0.51
NME1-209ENST00000511355 NCBP3Q53F19 620 aaKnown RBP18.22■□□□□ 0.51
NME1-209ENST00000511355 TRMT2AQ8IZ69 625 aaKnown RBP18.22■□□□□ 0.51
NME1-209ENST00000511355 BACH2Q9BYV9 841 aa18.22■□□□□ 0.51
NME1-209ENST00000511355 BCL9LQ86UU0 1499 aa18.22■□□□□ 0.51
NME1-209ENST00000511355 UNC5CLQ8IV45 518 aa18.21■□□□□ 0.51
NME1-209ENST00000511355 SLIT3O75094 1523 aa18.21■□□□□ 0.51
NME1-209ENST00000511355 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.2■□□□□ 0.5
NME1-209ENST00000511355 CDCA7LQ96GN5 454 aa18.2■□□□□ 0.5
NME1-209ENST00000511355 GJD4Q96KN9 370 aaPredicted RBP18.2■□□□□ 0.5
NME1-209ENST00000511355 DUSP27Q5VZP5 1158 aa18.2■□□□□ 0.5
NME1-209ENST00000511355 USP19O94966 1318 aa18.19■□□□□ 0.5
NME1-209ENST00000511355 PDE4AP27815 886 aa18.19■□□□□ 0.5
NME1-209ENST00000511355 LMOD2Q6P5Q4 547 aa18.19■□□□□ 0.5
NME1-209ENST00000511355 SLIT2O94813 1529 aa18.18■□□□□ 0.5
NME1-209ENST00000511355 MAP2P11137 1827 aaKnown RBP18.18■□□□□ 0.5
NME1-209ENST00000511355 CRYBG1Q9Y4K1 1723 aa18.18■□□□□ 0.5
NME1-209ENST00000511355 CENPQQ7L2Z9 268 aaPredicted RBP18.18■□□□□ 0.5
NME1-209ENST00000511355 USP35Q9P2H5 1018 aa18.18■□□□□ 0.5
NME1-209ENST00000511355 NFAT5O94916 1531 aa18.18■□□□□ 0.5
NME1-209ENST00000511355 PHRF1Q9P1Y6 1649 aaKnown RBP18.17■□□□□ 0.5
NME1-209ENST00000511355 MTHFSP49914 203 aa18.17■□□□□ 0.5
NME1-209ENST00000511355 DDRGK1Q96HY6 314 aa18.17■□□□□ 0.5
NME1-209ENST00000511355 SLFN5Q08AF3 891 aa18.16■□□□□ 0.5
NME1-209ENST00000511355 AAMPQ13685 434 aa18.16■□□□□ 0.5
NME1-209ENST00000511355 NUTM2GQ5VZR2 741 aa18.16■□□□□ 0.5
NME1-209ENST00000511355 KCNH5Q8NCM2 988 aa18.16■□□□□ 0.5
NME1-209ENST00000511355 CCDC125Q86Z20 511 aa18.16■□□□□ 0.5
NME1-209ENST00000511355 POLKQ9UBT6 870 aa18.16■□□□□ 0.5
NME1-209ENST00000511355 CFAP53Q96M91 514 aa18.15■□□□□ 0.5
NME1-209ENST00000511355 KIF24Q5T7B8 1368 aa18.15■□□□□ 0.5
NME1-209ENST00000511355 KDM2BQ8NHM5 1336 aa18.14■□□□□ 0.49
NME1-209ENST00000511355 COL3A1P02461 1466 aaPredicted RBP18.14■□□□□ 0.49
NME1-209ENST00000511355 E9PSI1 815 aa18.13■□□□□ 0.49
NME1-209ENST00000511355 VPS72Q15906 364 aa18.13■□□□□ 0.49
NME1-209ENST00000511355 CABLES1Q8TDN4 633 aa18.13■□□□□ 0.49
NME1-209ENST00000511355 CRBNQ96SW2 442 aa18.13■□□□□ 0.49
NME1-209ENST00000511355 NWD2Q9ULI1 1742 aa18.13■□□□□ 0.49
NME1-209ENST00000511355 LTN1O94822 1766 aa18.13■□□□□ 0.49
NME1-209ENST00000511355 ABCA3Q99758 1704 aa18.12■□□□□ 0.49
NME1-209ENST00000511355 PEAK1Q9H792 1746 aa18.12■□□□□ 0.49
NME1-209ENST00000511355 RRS1Q15050 365 aaKnown RBP18.12■□□□□ 0.49
NME1-209ENST00000511355 SALL2Q9Y467 1007 aaPredicted RBP18.12■□□□□ 0.49
NME1-209ENST00000511355 EMILIN1Q9Y6C2 1016 aa18.12■□□□□ 0.49
NME1-209ENST00000511355 RTL1A6NKG5 1358 aa18.12■□□□□ 0.49
NME1-209ENST00000511355 MAP3K19Q56UN5 1328 aa18.11■□□□□ 0.49
NME1-209ENST00000511355 SOX12O15370 315 aa18.11■□□□□ 0.49
NME1-209ENST00000511355 GCP02774 474 aa18.11■□□□□ 0.49
NME1-209ENST00000511355 FBLN1P23142 703 aa18.11■□□□□ 0.49
NME1-209ENST00000511355 FLT4P35916 1363 aa18.11■□□□□ 0.49
NME1-209ENST00000511355 PPM1GO15355 546 aaPredicted RBP18.1■□□□□ 0.49
NME1-209ENST00000511355 PLEKHG5O94827 1062 aa18.1■□□□□ 0.49
NME1-209ENST00000511355 CCDC9Q9Y3X0 531 aaKnown RBP18.09■□□□□ 0.49
NME1-209ENST00000511355 PLCH1Q4KWH8 1693 aa18.09■□□□□ 0.49
NME1-209ENST00000511355 GLI3P10071 1580 aa18.09■□□□□ 0.49
NME1-209ENST00000511355 ABCC6O95255 1503 aa18.09■□□□□ 0.49
NME1-209ENST00000511355 BCL11AQ9H165 835 aa18.09■□□□□ 0.49
NME1-209ENST00000511355 PDE3AQ14432 1141 aa18.08■□□□□ 0.48
NME1-209ENST00000511355 RTL5Q5HYW3 569 aaPredicted RBP18.08■□□□□ 0.48
NME1-209ENST00000511355 FAM83GA6ND36 823 aa18.07■□□□□ 0.48
NME1-209ENST00000511355 CPDO75976 1380 aa18.07■□□□□ 0.48
NME1-209ENST00000511355 COL14A1Q05707 1796 aaKnown RBP18.06■□□□□ 0.48
NME1-209ENST00000511355 ONECUT3O60422 494 aaPredicted RBP18.05■□□□□ 0.48
NME1-209ENST00000511355 DIAPH1O60610 1272 aaKnown RBP18.05■□□□□ 0.48
NME1-209ENST00000511355 AMPHP49418 695 aa18.05■□□□□ 0.48
NME1-209ENST00000511355 ARHGEF25Q86VW2 580 aa18.05■□□□□ 0.48
NME1-209ENST00000511355 SEPT12Q8IYM1 358 aa18.05■□□□□ 0.48
NME1-209ENST00000511355 HOXC9P31274 260 aa18.04■□□□□ 0.48
NME1-209ENST00000511355 BTG4Q9NY30 223 aa18.04■□□□□ 0.48
NME1-209ENST00000511355 PLIN1O60240 522 aa18.03■□□□□ 0.48
NME1-209ENST00000511355 DEKP35659 375 aaKnown RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms