RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 CCDC181Q5TID7 509 aa9.84□□□□□ -0.83
HTT-208ENST00000510626 CSB-PGBD3P0DP91 1061 aa9.84□□□□□ -0.83
HTT-208ENST00000510626 NUP62CLQ9H1M0 184 aa9.84□□□□□ -0.83
HTT-208ENST00000510626 KRT222Q8N1A0 295 aa9.84□□□□□ -0.83
HTT-208ENST00000510626 RNF214Q8ND24 703 aa9.84□□□□□ -0.83
HTT-208ENST00000510626 CTNNA3Q9UI47 895 aa9.84□□□□□ -0.83
HTT-208ENST00000510626 CASKIN1Q8WXD9 1431 aa9.83□□□□□ -0.84
HTT-208ENST00000510626 ARHGAP29Q52LW3 1261 aa9.83□□□□□ -0.84
HTT-208ENST00000510626 TBC1D2BQ9UPU7 963 aa9.83□□□□□ -0.84
HTT-208ENST00000510626 STK38Q15208 465 aa9.83□□□□□ -0.84
HTT-208ENST00000510626 CCDC30Q5VVM6 783 aa9.83□□□□□ -0.84
HTT-208ENST00000510626 FGFR1OPO95684 399 aaKnown RBP9.83□□□□□ -0.84
HTT-208ENST00000510626 EPB41L2O43491 1005 aaKnown RBP9.83□□□□□ -0.84
HTT-208ENST00000510626 KIF5CO60282 957 aa9.83□□□□□ -0.84
HTT-208ENST00000510626 CCDC50Q8IVM0 306 aa9.83□□□□□ -0.84
HTT-208ENST00000510626 TRIM22Q8IYM9 498 aa9.83□□□□□ -0.84
HTT-208ENST00000510626 PYM1Q9BRP8 204 aaKnown RBP9.83□□□□□ -0.84
HTT-208ENST00000510626 TTC5Q8N0Z6 440 aa9.83□□□□□ -0.84
HTT-208ENST00000510626 CECR2Q9BXF3 1484 aa9.82□□□□□ -0.84
HTT-208ENST00000510626 TUBB2AQ13885 445 aa9.82□□□□□ -0.84
HTT-208ENST00000510626 TUBB2BQ9BVA1 445 aa9.82□□□□□ -0.84
HTT-208ENST00000510626 BMS1Q14692 1282 aaKnown RBP9.82□□□□□ -0.84
HTT-208ENST00000510626 SUPT6HQ7KZ85 1726 aaKnown RBP9.82□□□□□ -0.84
HTT-208ENST00000510626 GAS2L2Q8NHY3 880 aa9.82□□□□□ -0.84
HTT-208ENST00000510626 GNAI2P04899 355 aa9.82□□□□□ -0.84
HTT-208ENST00000510626 MVPQ14764 893 aaKnown RBP9.82□□□□□ -0.84
HTT-208ENST00000510626 PDZRN3Q9UPQ7 1066 aa9.82□□□□□ -0.84
HTT-208ENST00000510626 BBXQ8WY36 941 aaPredicted RBP9.82□□□□□ -0.84
HTT-208ENST00000510626 ANO10Q9NW15 660 aa9.82□□□□□ -0.84
HTT-208ENST00000510626 TEFQ10587 303 aa9.82□□□□□ -0.84
HTT-208ENST00000510626 CCAR1Q8IX12 1150 aaKnown RBP9.82□□□□□ -0.84
HTT-208ENST00000510626 UPF3BQ9BZI7 483 aaKnown RBP9.82□□□□□ -0.84
HTT-208ENST00000510626 SWAP70Q9UH65 585 aa9.82□□□□□ -0.84
HTT-208ENST00000510626 FKBP5Q13451 457 aaPredicted RBP9.82□□□□□ -0.84
HTT-208ENST00000510626 SPATA32Q96LK8 384 aa9.82□□□□□ -0.84
HTT-208ENST00000510626 LNPKQ9C0E8 428 aa9.82□□□□□ -0.84
HTT-208ENST00000510626 FHOD3Q2V2M9 1422 aa9.81□□□□□ -0.84
HTT-208ENST00000510626 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.81□□□□□ -0.841e-6■■■□□ 18.8
HTT-208ENST00000510626 DESP17661 470 aa9.81□□□□□ -0.84
HTT-208ENST00000510626 CCDC43Q96MW1 224 aaKnown RBP9.81□□□□□ -0.84
HTT-208ENST00000510626 RRP7AQ9Y3A4 280 aaKnown RBP9.81□□□□□ -0.84
HTT-208ENST00000510626 CCDC102AQ96A19 550 aa9.81□□□□□ -0.84
HTT-208ENST00000510626 INSRP06213 1382 aa9.81□□□□□ -0.84
HTT-208ENST00000510626 SPECC1LQ69YQ0 1117 aa9.81□□□□□ -0.84
HTT-208ENST00000510626 CCDC171Q6TFL3 1326 aa9.81□□□□□ -0.84
HTT-208ENST00000510626 FOXD4L6Q3SYB3 417 aaPredicted RBP9.81□□□□□ -0.84
HTT-208ENST00000510626 FOXD4L3Q6VB84 417 aaPredicted RBP9.81□□□□□ -0.84
HTT-208ENST00000510626 GCOM1H8Y6P7 765 aaPredicted RBP9.81□□□□□ -0.84
HTT-208ENST00000510626 MYZAPP0CAP1 466 aa9.81□□□□□ -0.84
HTT-208ENST00000510626 LIG1P18858 919 aa9.81□□□□□ -0.84
HTT-208ENST00000510626 VPS36Q86VN1 386 aa9.81□□□□□ -0.84
HTT-208ENST00000510626 PANK1Q8TE04 598 aa9.81□□□□□ -0.84
HTT-208ENST00000510626 PNISRQ8TF01 805 aaKnown RBP9.81□□□□□ -0.84
HTT-208ENST00000510626 CCDC150Q8NCX0 1101 aa9.81□□□□□ -0.84
HTT-208ENST00000510626 RBM10P98175 930 aaKnown RBP9.8□□□□□ -0.84
HTT-208ENST00000510626 ME1P48163 572 aa9.8□□□□□ -0.84
HTT-208ENST00000510626 NGDNQ8NEJ9 315 aaKnown RBP9.8□□□□□ -0.84
HTT-208ENST00000510626 CASQ1P31415 396 aa9.8□□□□□ -0.84
HTT-208ENST00000510626 SYCP1Q15431 976 aa9.8□□□□□ -0.84
HTT-208ENST00000510626 LRRC9Q6ZRR7 1453 aa9.8□□□□□ -0.84
HTT-208ENST00000510626 FYB1O15117 783 aa9.8□□□□□ -0.84
HTT-208ENST00000510626 SAFB2Q14151 953 aaKnown RBP eCLIP9.8□□□□□ -0.84
HTT-208ENST00000510626 SARNPP82979 210 aaKnown RBP9.8□□□□□ -0.84
HTT-208ENST00000510626 TRIM34Q9BYJ4 488 aa9.8□□□□□ -0.84
HTT-208ENST00000510626 NOL7Q9UMY1 257 aaKnown RBP9.8□□□□□ -0.84
HTT-208ENST00000510626 LARP1BQ659C4 914 aaKnown RBP9.8□□□□□ -0.84
HTT-208ENST00000510626 CDK5RAP3Q96JB5 506 aa9.8□□□□□ -0.84
HTT-208ENST00000510626 HOXA7P31268 230 aaPredicted RBP9.8□□□□□ -0.84
HTT-208ENST00000510626 ABCC11Q96J66 1382 aa9.8□□□□□ -0.84
HTT-208ENST00000510626 ENOX2Q16206 610 aaKnown RBP9.79□□□□□ -0.84
HTT-208ENST00000510626 GIGYF2Q6Y7W6 1299 aaKnown RBP9.79□□□□□ -0.84
HTT-208ENST00000510626 VPS37DQ86XT2 251 aa9.79□□□□□ -0.84
HTT-208ENST00000510626 ANKS4BQ8N8V4 417 aa9.79□□□□□ -0.84
HTT-208ENST00000510626 NAA15Q9BXJ9 866 aaKnown RBP9.79□□□□□ -0.84
HTT-208ENST00000510626 NUTM1Q86Y26 1132 aa9.79□□□□□ -0.84
HTT-208ENST00000510626 SPA17Q15506 151 aa9.79□□□□□ -0.84
HTT-208ENST00000510626 GNL3LQ9NVN8 582 aaKnown RBP9.79□□□□□ -0.84
HTT-208ENST00000510626 ADAMTS8Q9UP79 889 aa9.79□□□□□ -0.84
HTT-208ENST00000510626 G3V3G9 751 aa9.79□□□□□ -0.84
HTT-208ENST00000510626 FIBPO43427 364 aa9.79□□□□□ -0.84
HTT-208ENST00000510626 SMC1AQ14683 1233 aaKnown RBP9.79□□□□□ -0.84
HTT-208ENST00000510626 DCAF8Q5TAQ9 597 aa9.79□□□□□ -0.84
HTT-208ENST00000510626 CHD1LQ86WJ1 897 aa9.79□□□□□ -0.84
HTT-208ENST00000510626 TAF4BQ92750 862 aa9.79□□□□□ -0.84
HTT-208ENST00000510626 DDX19AQ9NUU7 478 aaKnown RBP9.79□□□□□ -0.84
HTT-208ENST00000510626 BCL2L13Q9BXK5 485 aa9.79□□□□□ -0.84
HTT-208ENST00000510626 TAOK3Q9H2K8 898 aa9.79□□□□□ -0.84
HTT-208ENST00000510626 PAK3O75914 559 aaPredicted RBP9.79□□□□□ -0.84
HTT-208ENST00000510626 CETN2P41208 172 aa9.79□□□□□ -0.84
HTT-208ENST00000510626 ALS2CR12Q96Q35 445 aa9.79□□□□□ -0.84
HTT-208ENST00000510626 ALDH1L2Q3SY69 923 aa9.78□□□□□ -0.84
HTT-208ENST00000510626 SMARCA4P51532 1647 aa9.78□□□□□ -0.84
HTT-208ENST00000510626 STMN4Q9H169 189 aaPredicted RBP9.78□□□□□ -0.84
HTT-208ENST00000510626 DNAJC21Q5F1R6 531 aaKnown RBP9.78□□□□□ -0.84
HTT-208ENST00000510626 NACAP1Q9BZK3 213 aa9.78□□□□□ -0.84
HTT-208ENST00000510626 GOLIM4O00461 696 aa9.78□□□□□ -0.84
HTT-208ENST00000510626 BMP2KQ9NSY1 1161 aaPredicted RBP9.78□□□□□ -0.84
HTT-208ENST00000510626 AEBP2Q6ZN18 517 aaPredicted RBP9.78□□□□□ -0.84
HTT-208ENST00000510626 RAB11FIP3O75154 756 aa9.78□□□□□ -0.84
HTT-208ENST00000510626 HMGB2P26583 209 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms