RNA–Protein interactions for RNA: ENST00000509860.1

PRDM16-205, Transcript of PR/SET domain 16, humanhuman

TSL 5

Gene PRDM16, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-205ENST00000509860 RGPD2P0DJD1 1756 aa16.34■□□□□ 0.21
PRDM16-205ENST00000509860 KIF1AQ12756 1690 aa16.34■□□□□ 0.21
PRDM16-205ENST00000509860 HSP90AB2PQ58FF8 381 aa16.34■□□□□ 0.21
PRDM16-205ENST00000509860 NGDNQ8NEJ9 315 aaKnown RBP16.33■□□□□ 0.21
PRDM16-205ENST00000509860 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.33■□□□□ 0.21
PRDM16-205ENST00000509860 HSPA2P54652 639 aa16.33■□□□□ 0.2
PRDM16-205ENST00000509860 AEBP1Q8IUX7 1158 aa16.33■□□□□ 0.2
PRDM16-205ENST00000509860 CRBNQ96SW2 442 aa16.33■□□□□ 0.2
PRDM16-205ENST00000509860 CRYBG1Q9Y4K1 1723 aa16.32■□□□□ 0.2
PRDM16-205ENST00000509860 FANCIQ9NVI1 1328 aa16.31■□□□□ 0.2
PRDM16-205ENST00000509860 PHF8Q9UPP1 1060 aa16.31■□□□□ 0.2
PRDM16-205ENST00000509860 SLIT3O75094 1523 aa16.31■□□□□ 0.2
PRDM16-205ENST00000509860 ORAI2Q96SN7 254 aa16.31■□□□□ 0.2
PRDM16-205ENST00000509860 C1orf167Q5SNV9 1468 aa16.31■□□□□ 0.2
PRDM16-205ENST00000509860 TSR2Q969E8 191 aaKnown RBP16.31■□□□□ 0.2
PRDM16-205ENST00000509860 SBNO1A3KN83 1393 aa16.3■□□□□ 0.2
PRDM16-205ENST00000509860 MST1RQ04912 1400 aa16.3■□□□□ 0.2
PRDM16-205ENST00000509860 NUTM2GQ5VZR2 741 aa16.3■□□□□ 0.2
PRDM16-205ENST00000509860 RIPK4P57078 832 aa16.3■□□□□ 0.2
PRDM16-205ENST00000509860 SOX12O15370 315 aa16.29■□□□□ 0.2
PRDM16-205ENST00000509860 LRRC37A3O60309 1634 aa16.29■□□□□ 0.2
PRDM16-205ENST00000509860 RARSP54136 660 aaKnown RBP16.28■□□□□ 0.2
PRDM16-205ENST00000509860 MED1Q15648 1581 aaPredicted RBP16.28■□□□□ 0.2
PRDM16-205ENST00000509860 RGPD5Q99666 1765 aa16.27■□□□□ 0.2
PRDM16-205ENST00000509860 FLT4P35916 1363 aa16.27■□□□□ 0.2
PRDM16-205ENST00000509860 MAPK8IP3Q9UPT6 1336 aa16.27■□□□□ 0.2
PRDM16-205ENST00000509860 KDRP35968 1356 aa16.27■□□□□ 0.2
PRDM16-205ENST00000509860 TMEM94Q12767 1356 aa16.27■□□□□ 0.2
PRDM16-205ENST00000509860 NFE2L2Q16236 605 aa16.27■□□□□ 0.19
PRDM16-205ENST00000509860 THUMPD2Q9BTF0 503 aaKnown RBP16.27■□□□□ 0.19
PRDM16-205ENST00000509860 TNNQ9UQP3 1299 aa16.27■□□□□ 0.19
PRDM16-205ENST00000509860 IL16Q14005 1332 aa16.26■□□□□ 0.19
PRDM16-205ENST00000509860 CAMTA1Q9Y6Y1 1673 aa16.26■□□□□ 0.19
PRDM16-205ENST00000509860 ESCO1Q5FWF5 840 aa16.26■□□□□ 0.19
PRDM16-205ENST00000509860 ARHGEF10O15013 1369 aa16.26■□□□□ 0.19
PRDM16-205ENST00000509860 PODXL2Q9NZ53 605 aa16.25■□□□□ 0.19
PRDM16-205ENST00000509860 NLRP6P59044 892 aa16.25■□□□□ 0.19
PRDM16-205ENST00000509860 FAM83GA6ND36 823 aa16.24■□□□□ 0.19
PRDM16-205ENST00000509860 DCCP43146 1447 aa16.24■□□□□ 0.19
PRDM16-205ENST00000509860 HOXC9P31274 260 aa16.23■□□□□ 0.19
PRDM16-205ENST00000509860 SULT6B1Q6IMI4 303 aa16.23■□□□□ 0.19
PRDM16-205ENST00000509860 PROSER2Q86WR7 435 aaPredicted RBP16.23■□□□□ 0.19
PRDM16-205ENST00000509860 IGSF1Q8N6C5 1336 aa16.23■□□□□ 0.19
PRDM16-205ENST00000509860 ABTB2Q8N961 1025 aa16.23■□□□□ 0.19
PRDM16-205ENST00000509860 ZNF853P0CG23 659 aa16.23■□□□□ 0.19
PRDM16-205ENST00000509860 PKNOX2Q96KN3 472 aa16.23■□□□□ 0.19
PRDM16-205ENST00000509860 XPCQ01831 940 aaPredicted RBP16.22■□□□□ 0.19
PRDM16-205ENST00000509860 EXOSC9Q06265 439 aaKnown RBP16.22■□□□□ 0.19
PRDM16-205ENST00000509860 NCOA3Q9Y6Q9 1424 aa16.22■□□□□ 0.19
PRDM16-205ENST00000509860 COL18A1P39060 1754 aa16.22■□□□□ 0.19
PRDM16-205ENST00000509860 LMO7Q8WWI1 1683 aa16.22■□□□□ 0.19
PRDM16-205ENST00000509860 KIF24Q5T7B8 1368 aa16.22■□□□□ 0.19
PRDM16-205ENST00000509860 VIRMAQ69YN4 1812 aaKnown RBP16.22■□□□□ 0.19
PRDM16-205ENST00000509860 KDM2BQ8NHM5 1336 aa16.21■□□□□ 0.19
PRDM16-205ENST00000509860 RLBP1P12271 317 aa16.21■□□□□ 0.19
PRDM16-205ENST00000509860 EYA1Q99502 592 aa16.21■□□□□ 0.19
PRDM16-205ENST00000509860 MYH16Q9H6N6 1097 aa16.21■□□□□ 0.19
PRDM16-205ENST00000509860 PXDNQ92626 1479 aa16.21■□□□□ 0.19
PRDM16-205ENST00000509860 BCL2L13Q9BXK5 485 aa16.21■□□□□ 0.19
PRDM16-205ENST00000509860 PNNQ9H307 717 aaKnown RBP16.21■□□□□ 0.19
PRDM16-205ENST00000509860 C19orf44Q9H6X5 657 aa16.21■□□□□ 0.19
PRDM16-205ENST00000509860 PAK3O75914 559 aaPredicted RBP16.2■□□□□ 0.18
PRDM16-205ENST00000509860 FOXO3O43524 673 aa16.2■□□□□ 0.18
PRDM16-205ENST00000509860 DCTN1Q14203 1278 aa16.2■□□□□ 0.18
PRDM16-205ENST00000509860 RTL1A6NKG5 1358 aa16.2■□□□□ 0.18
PRDM16-205ENST00000509860 USP19O94966 1318 aa16.19■□□□□ 0.18
PRDM16-205ENST00000509860 DDX17Q92841 729 aaKnown RBP16.19■□□□□ 0.18
PRDM16-205ENST00000509860 CRB1P82279 1406 aa16.19■□□□□ 0.18
PRDM16-205ENST00000509860 SKAP1Q86WV1 359 aa16.19■□□□□ 0.18
PRDM16-205ENST00000509860 PANK1Q8TE04 598 aa16.18■□□□□ 0.18
PRDM16-205ENST00000509860 NCAPD2Q15021 1401 aa16.18■□□□□ 0.18
PRDM16-205ENST00000509860 C14orf37Q86TY3 774 aa16.17■□□□□ 0.18
PRDM16-205ENST00000509860 PSME1Q06323 249 aa16.17■□□□□ 0.18
PRDM16-205ENST00000509860 MBIPQ9NS73 344 aa16.17■□□□□ 0.18
PRDM16-205ENST00000509860 MSH6P52701 1360 aa16.16■□□□□ 0.18
PRDM16-205ENST00000509860 TSPYL6Q8N831 410 aa16.16■□□□□ 0.18
PRDM16-205ENST00000509860 SSH1Q8WYL5 1049 aa16.16■□□□□ 0.18
PRDM16-205ENST00000509860 FAM208AQ9UK61 1670 aaKnown RBP16.16■□□□□ 0.18
PRDM16-205ENST00000509860 ABCA3Q99758 1704 aa16.16■□□□□ 0.18
PRDM16-205ENST00000509860 MTHFSDQ2M296 383 aaKnown RBP16.16■□□□□ 0.18
PRDM16-205ENST00000509860 AMPHP49418 695 aa16.15■□□□□ 0.18
PRDM16-205ENST00000509860 PDE3AQ14432 1141 aa16.15■□□□□ 0.18
PRDM16-205ENST00000509860 IFT57Q9NWB7 429 aa16.15■□□□□ 0.18
PRDM16-205ENST00000509860 ZNF335Q9H4Z2 1342 aaPredicted RBP16.14■□□□□ 0.17
PRDM16-205ENST00000509860 RTN4Q9NQC3 1192 aaKnown RBP16.14■□□□□ 0.17
PRDM16-205ENST00000509860 CT47B1P0C2W7 299 aaPredicted RBP16.13■□□□□ 0.17
PRDM16-205ENST00000509860 MCM10Q7L590 875 aa16.13■□□□□ 0.17
PRDM16-205ENST00000509860 KRT28Q7Z3Y7 464 aa16.13■□□□□ 0.17
PRDM16-205ENST00000509860 IP6K1Q92551 441 aa16.13■□□□□ 0.17
PRDM16-205ENST00000509860 COG6Q9Y2V7 657 aa16.12■□□□□ 0.17
PRDM16-205ENST00000509860 VAMP4O75379 141 aa16.12■□□□□ 0.17
PRDM16-205ENST00000509860 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.12■□□□□ 0.17
PRDM16-205ENST00000509860 FRAT1Q92837 279 aaPredicted RBP16.12■□□□□ 0.17
PRDM16-205ENST00000509860 CFAP44Q96MT7 982 aa16.12■□□□□ 0.17
PRDM16-205ENST00000509860 ARHGEF25Q86VW2 580 aa16.11■□□□□ 0.17
PRDM16-205ENST00000509860 USHBP1Q8N6Y0 703 aa16.11■□□□□ 0.17
PRDM16-205ENST00000509860 AXIN2Q9Y2T1 843 aa16.11■□□□□ 0.17
PRDM16-205ENST00000509860 GCP02774 474 aa16.11■□□□□ 0.17
PRDM16-205ENST00000509860 C8orf58Q8NAV2 365 aa16.11■□□□□ 0.17
PRDM16-205ENST00000509860 RBM19Q9Y4C8 960 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms