RNA–Protein interactions for RNA: ENST00000509176.5

CCSER1-209, Transcript of coiled-coil serine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCSER1, Length 5,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-209ENST00000509176 ADAMTS8Q9UP79 889 aa13.17□□□□□ -0.3
CCSER1-209ENST00000509176 USHBP1Q8N6Y0 703 aa13.16□□□□□ -0.3
CCSER1-209ENST00000509176 IDH1O75874 414 aaKnown RBP13.16□□□□□ -0.3
CCSER1-209ENST00000509176 WWC3Q9ULE0 1092 aa13.16□□□□□ -0.3
CCSER1-209ENST00000509176 DEKP35659 375 aaKnown RBP13.16□□□□□ -0.3
CCSER1-209ENST00000509176 C6orf229H3BNL8 230 aa13.16□□□□□ -0.3
CCSER1-209ENST00000509176 MAP4K4O95819 1239 aaPredicted RBP13.16□□□□□ -0.3
CCSER1-209ENST00000509176 TSR2Q969E8 191 aaKnown RBP13.15□□□□□ -0.3
CCSER1-209ENST00000509176 C8orf37Q96NL8 207 aa13.15□□□□□ -0.3
CCSER1-209ENST00000509176 ERBINQ96RT1 1412 aa13.15□□□□□ -0.3
CCSER1-209ENST00000509176 METTL24Q5JXM2 366 aa13.15□□□□□ -0.3
CCSER1-209ENST00000509176 VSIG10Q8N0Z9 540 aa13.15□□□□□ -0.3
CCSER1-209ENST00000509176 AMOTL2Q9Y2J4 779 aa13.15□□□□□ -0.3
CCSER1-209ENST00000509176 CD109Q6YHK3 1445 aa13.15□□□□□ -0.3
CCSER1-209ENST00000509176 POLR3DP05423 398 aaPredicted RBP13.15□□□□□ -0.3
CCSER1-209ENST00000509176 SSBP05455 408 aaKnown RBP eCLIP13.15□□□□□ -0.3
CCSER1-209ENST00000509176 CAVIN4Q5BKX8 364 aa13.15□□□□□ -0.3
CCSER1-209ENST00000509176 PDILTQ8N807 584 aa13.15□□□□□ -0.3
CCSER1-209ENST00000509176 PHF8Q9UPP1 1060 aa13.15□□□□□ -0.3
CCSER1-209ENST00000509176 IPO9Q96P70 1041 aaKnown RBP13.15□□□□□ -0.3
CCSER1-209ENST00000509176 TRIM22Q8IYM9 498 aa13.14□□□□□ -0.31
CCSER1-209ENST00000509176 NCOA2Q15596 1464 aa13.14□□□□□ -0.31
CCSER1-209ENST00000509176 PLEKHH2Q8IVE3 1493 aa13.14□□□□□ -0.31
CCSER1-209ENST00000509176 CDC45O75419 566 aa13.14□□□□□ -0.31
CCSER1-209ENST00000509176 CCDC61Q9Y6R9 512 aa13.14□□□□□ -0.31
CCSER1-209ENST00000509176 KIF7Q2M1P5 1343 aa13.14□□□□□ -0.31
CCSER1-209ENST00000509176 UBAC1Q9BSL1 405 aa13.14□□□□□ -0.31
CCSER1-209ENST00000509176 RDXP35241 583 aaKnown RBP13.13□□□□□ -0.31
CCSER1-209ENST00000509176 PDE4AP27815 886 aa13.13□□□□□ -0.31
CCSER1-209ENST00000509176 C9orf84Q5VXU9 1444 aa13.13□□□□□ -0.31
CCSER1-209ENST00000509176 AACSQ86V21 672 aa13.13□□□□□ -0.31
CCSER1-209ENST00000509176 MAGEC2Q9UBF1 373 aaPredicted RBP13.13□□□□□ -0.31
CCSER1-209ENST00000509176 NCAPD3P42695 1498 aa13.13□□□□□ -0.31
CCSER1-209ENST00000509176 RFC4P35249 363 aa13.13□□□□□ -0.31
CCSER1-209ENST00000509176 KRT28Q7Z3Y7 464 aa13.13□□□□□ -0.31
CCSER1-209ENST00000509176 GNAT3A8MTJ3 354 aa13.12□□□□□ -0.31
CCSER1-209ENST00000509176 BRPF1P55201 1214 aaPredicted RBP13.12□□□□□ -0.31
CCSER1-209ENST00000509176 TTLL5Q6EMB2 1281 aa13.12□□□□□ -0.31
CCSER1-209ENST00000509176 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.12□□□□□ -0.31
CCSER1-209ENST00000509176 CEBPZQ03701 1054 aaKnown RBP13.12□□□□□ -0.31
CCSER1-209ENST00000509176 STK3Q13188 491 aa13.12□□□□□ -0.31
CCSER1-209ENST00000509176 CCT4P50991 539 aaKnown RBP13.12□□□□□ -0.31
CCSER1-209ENST00000509176 CCDC173Q0VFZ6 552 aa13.12□□□□□ -0.31
CCSER1-209ENST00000509176 DZIP1Q86YF9 867 aaKnown RBP13.12□□□□□ -0.31
CCSER1-209ENST00000509176 MIS18AQ9NYP9 233 aa13.12□□□□□ -0.31
CCSER1-209ENST00000509176 PPP2R1AP30153 589 aa13.12□□□□□ -0.31
CCSER1-209ENST00000509176 SKOR2Q2VWA4 1001 aaPredicted RBP13.12□□□□□ -0.31
CCSER1-209ENST00000509176 TRMT112Q9UI30 125 aaKnown RBP13.12□□□□□ -0.31
CCSER1-209ENST00000509176 NOB1Q9ULX3 412 aaKnown RBP13.11□□□□□ -0.31
CCSER1-209ENST00000509176 SRGAP3O43295 1099 aa13.11□□□□□ -0.31
CCSER1-209ENST00000509176 TNNT3P45378 269 aaPredicted RBP13.11□□□□□ -0.31
CCSER1-209ENST00000509176 ZBED9Q6R2W3 1325 aa13.11□□□□□ -0.31
CCSER1-209ENST00000509176 LRPPRCP42704 1394 aaKnown RBP13.1□□□□□ -0.31
CCSER1-209ENST00000509176 FBXO31Q5XUX0 539 aaPredicted RBP13.1□□□□□ -0.31
CCSER1-209ENST00000509176 AIDAQ96BJ3 306 aa13.1□□□□□ -0.31
CCSER1-209ENST00000509176 IFIT1P09914 478 aaKnown RBP13.1□□□□□ -0.31
CCSER1-209ENST00000509176 MKNK2Q9HBH9 465 aa13.1□□□□□ -0.31
CCSER1-209ENST00000509176 RPGRIP1LQ68CZ1 1315 aa13.1□□□□□ -0.31
CCSER1-209ENST00000509176 CC2D2AQ9P2K1 1620 aa13.1□□□□□ -0.31
CCSER1-209ENST00000509176 NEBLO76041 1014 aa13.1□□□□□ -0.31
CCSER1-209ENST00000509176 GPTP24298 496 aa13.09□□□□□ -0.31
CCSER1-209ENST00000509176 GPS2Q13227 327 aa13.09□□□□□ -0.31
CCSER1-209ENST00000509176 STK38Q15208 465 aa13.09□□□□□ -0.31
CCSER1-209ENST00000509176 CHRNA2Q15822 529 aa13.09□□□□□ -0.31
CCSER1-209ENST00000509176 FMNL2Q96PY5 1086 aa13.09□□□□□ -0.31
CCSER1-209ENST00000509176 LRRCC1Q9C099 1032 aa13.09□□□□□ -0.31
CCSER1-209ENST00000509176 TANGO6Q9C0B7 1094 aa13.09□□□□□ -0.31
CCSER1-209ENST00000509176 CADPS2Q86UW7 1296 aa13.08□□□□□ -0.31
CCSER1-209ENST00000509176 FEZ1Q99689 392 aa13.08□□□□□ -0.31
CCSER1-209ENST00000509176 MINDY4BA8MYZ0 360 aa13.08□□□□□ -0.32
CCSER1-209ENST00000509176 MYD88Q99836 296 aa13.08□□□□□ -0.32
CCSER1-209ENST00000509176 ATAD2Q6PL18 1390 aa13.08□□□□□ -0.32
CCSER1-209ENST00000509176 ACSBG1Q96GR2 724 aa13.08□□□□□ -0.32
CCSER1-209ENST00000509176 NAT10Q9H0A0 1025 aaKnown RBP13.08□□□□□ -0.32
CCSER1-209ENST00000509176 ZNF287Q9HBT7 754 aa13.08□□□□□ -0.32
CCSER1-209ENST00000509176 CCDC7Q96M83 1385 aa13.08□□□□□ -0.32
CCSER1-209ENST00000509176 TNIP1Q15025 636 aa13.07□□□□□ -0.32
CCSER1-209ENST00000509176 NBPF8Q3BBV2 869 aa13.07□□□□□ -0.32
CCSER1-209ENST00000509176 NBPF14Q5TI25 921 aa13.07□□□□□ -0.32
CCSER1-209ENST00000509176 C22orf23Q9BZE7 217 aa13.07□□□□□ -0.32
CCSER1-209ENST00000509176 DNAJC5BQ9UF47 199 aa13.07□□□□□ -0.32
CCSER1-209ENST00000509176 NEK4P51957 841 aa13.07□□□□□ -0.32
CCSER1-209ENST00000509176 POLD1P28340 1107 aa13.07□□□□□ -0.32
CCSER1-209ENST00000509176 CCDC96Q2M329 555 aa13.07□□□□□ -0.32
CCSER1-209ENST00000509176 RUFY1Q96T51 708 aa13.07□□□□□ -0.32
CCSER1-209ENST00000509176 CASKIN1Q8WXD9 1431 aa13.07□□□□□ -0.32
CCSER1-209ENST00000509176 ECM2O94769 699 aaPredicted RBP13.07□□□□□ -0.32
CCSER1-209ENST00000509176 CCDC97Q96F63 343 aaPredicted RBP13.07□□□□□ -0.32
CCSER1-209ENST00000509176 MSH6P52701 1360 aa13.06□□□□□ -0.32
CCSER1-209ENST00000509176 BCAR3O75815 825 aa13.06□□□□□ -0.32
CCSER1-209ENST00000509176 CA8P35219 290 aa13.06□□□□□ -0.32
CCSER1-209ENST00000509176 NUCB2P80303 420 aa13.06□□□□□ -0.32
CCSER1-209ENST00000509176 CAGE1Q8TC20 777 aa13.06□□□□□ -0.32
CCSER1-209ENST00000509176 BMP2KQ9NSY1 1161 aaPredicted RBP13.06□□□□□ -0.32
CCSER1-209ENST00000509176 HFM1A2PYH4 1435 aa13.06□□□□□ -0.32
CCSER1-209ENST00000509176 CFTRP13569 1480 aa13.06□□□□□ -0.32
CCSER1-209ENST00000509176 KINO60870 393 aaKnown RBP13.06□□□□□ -0.32
CCSER1-209ENST00000509176 TRIM21P19474 475 aaKnown RBP13.06□□□□□ -0.32
CCSER1-209ENST00000509176 NOL7Q9UMY1 257 aaKnown RBP13.06□□□□□ -0.32
CCSER1-209ENST00000509176 ST5P78524 1137 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms