RNA–Protein interactions for RNA: ENST00000508838.5

AFP-204, Transcript of alpha fetoprotein, humanhuman

TSL 2

Gene AFP, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-204ENST00000508838 SEPT12Q8IYM1 358 aa8.42□□□□□ -1.06
AFP-204ENST00000508838 QRICH2Q9H0J4 1663 aa8.42□□□□□ -1.06
AFP-204ENST00000508838 COL24A1Q17RW2 1714 aa8.42□□□□□ -1.06
AFP-204ENST00000508838 USP54Q70EL1 1684 aa8.41□□□□□ -1.06
AFP-204ENST00000508838 PSDA5PKW4 1024 aaPredicted RBP8.41□□□□□ -1.06
AFP-204ENST00000508838 HRCP23327 699 aa8.41□□□□□ -1.06
AFP-204ENST00000508838 RNF166Q96A37 237 aaPredicted RBP8.41□□□□□ -1.06
AFP-204ENST00000508838 ARHGEF10O15013 1369 aa8.4□□□□□ -1.06
AFP-204ENST00000508838 EMP3P54852 163 aa8.4□□□□□ -1.06
AFP-204ENST00000508838 CCDC125Q86Z20 511 aa8.4□□□□□ -1.06
AFP-204ENST00000508838 STK26Q9P289 416 aa8.4□□□□□ -1.06
AFP-204ENST00000508838 SLIT3O75094 1523 aa8.39□□□□□ -1.07
AFP-204ENST00000508838 CHD4Q14839 1912 aa8.39□□□□□ -1.07
AFP-204ENST00000508838 FAM182BQ5T319 152 aa8.39□□□□□ -1.07
AFP-204ENST00000508838 FAM83GA6ND36 823 aa8.38□□□□□ -1.07
AFP-204ENST00000508838 KRT28Q7Z3Y7 464 aa8.38□□□□□ -1.07
AFP-204ENST00000508838 PHF8Q9UPP1 1060 aa8.38□□□□□ -1.07
AFP-204ENST00000508838 QSER1Q2KHR3 1735 aa8.37□□□□□ -1.07
AFP-204ENST00000508838 MON2Q7Z3U7 1717 aa8.37□□□□□ -1.07
AFP-204ENST00000508838 SHANK3Q9BYB0 1731 aa8.37□□□□□ -1.07
AFP-204ENST00000508838 NHSQ6T4R5 1651 aa8.37□□□□□ -1.07
AFP-204ENST00000508838 CEP350Q5VT06 3117 aa8.37□□□□□ -1.07
AFP-204ENST00000508838 SPATA31A5Q5VU36 1347 aa8.37□□□□□ -1.07
AFP-204ENST00000508838 SPATA31A7Q8IWB4 1347 aa8.37□□□□□ -1.07
AFP-204ENST00000508838 KRT27Q7Z3Y8 459 aa8.37□□□□□ -1.07
AFP-204ENST00000508838 HS3ST6Q96QI5 342 aa8.37□□□□□ -1.07
AFP-204ENST00000508838 C14orf93Q9H972 538 aaKnown RBP8.37□□□□□ -1.07
AFP-204ENST00000508838 SSH2Q76I76 1423 aa8.37□□□□□ -1.07
AFP-204ENST00000508838 TRPM1Q7Z4N2 1603 aa8.36□□□□□ -1.07
AFP-204ENST00000508838 ACIN1Q9UKV3 1341 aaKnown RBP8.36□□□□□ -1.07
AFP-204ENST00000508838 TIE1P35590 1138 aa8.36□□□□□ -1.07
AFP-204ENST00000508838 FAM98CQ17RN3 349 aaKnown RBP8.36□□□□□ -1.07
AFP-204ENST00000508838 CFAP70Q5T0N1 1121 aa8.36□□□□□ -1.07
AFP-204ENST00000508838 COL5A2P05997 1499 aaPredicted RBP8.36□□□□□ -1.07
AFP-204ENST00000508838 LTN1O94822 1766 aa8.35□□□□□ -1.07
AFP-204ENST00000508838 EN1Q05925 392 aaPredicted RBP8.35□□□□□ -1.07
AFP-204ENST00000508838 SIRT1Q96EB6 747 aa8.35□□□□□ -1.07
AFP-204ENST00000508838 PRAM1Q96QH2 718 aa8.35□□□□□ -1.07
AFP-204ENST00000508838 BTAF1O14981 1849 aa8.35□□□□□ -1.07
AFP-204ENST00000508838 DHX57Q6P158 1386 aaKnown RBP8.35□□□□□ -1.07
AFP-204ENST00000508838 KIAA0232Q92628 1395 aa8.35□□□□□ -1.07
AFP-204ENST00000508838 POTEB3A0JP26 581 aa8.34□□□□□ -1.07
AFP-204ENST00000508838 RGL3Q3MIN7 710 aa8.34□□□□□ -1.07
AFP-204ENST00000508838 POTEBQ6S5H4 581 aa8.34□□□□□ -1.07
AFP-204ENST00000508838 BTG4Q9NY30 223 aa8.34□□□□□ -1.07
AFP-204ENST00000508838 POLR3AO14802 1390 aaPredicted RBP8.34□□□□□ -1.07
AFP-204ENST00000508838 NFAT5O94916 1531 aa8.34□□□□□ -1.08
AFP-204ENST00000508838 SPATA31A1Q5TZJ5 1347 aa8.33□□□□□ -1.08
AFP-204ENST00000508838 FAM205CA6NFA0 338 aa8.33□□□□□ -1.08
AFP-204ENST00000508838 PLEKHG5O94827 1062 aa8.33□□□□□ -1.08
AFP-204ENST00000508838 SAFB2Q14151 953 aaKnown RBP eCLIP8.33□□□□□ -1.08
AFP-204ENST00000508838 R3HDM1Q15032 1099 aaKnown RBP8.33□□□□□ -1.08
AFP-204ENST00000508838 IER5LQ5T953 404 aa8.33□□□□□ -1.08
AFP-204ENST00000508838 PMFBP1Q8TBY8 1022 aa8.33□□□□□ -1.08
AFP-204ENST00000508838 CAMKK2Q96RR4 588 aa8.33□□□□□ -1.08
AFP-204ENST00000508838 MPHOSPH9Q99550 1183 aa8.33□□□□□ -1.08
AFP-204ENST00000508838 TRPC6Q9Y210 931 aa8.33□□□□□ -1.08
AFP-204ENST00000508838 USP19O94966 1318 aa8.32□□□□□ -1.08
AFP-204ENST00000508838 EZH2Q15910 746 aaKnown RBP8.32□□□□□ -1.08
AFP-204ENST00000508838 RGPD2P0DJD1 1756 aa8.31□□□□□ -1.08
AFP-204ENST00000508838 HIRIP3Q9BW71 556 aaPredicted RBP8.31□□□□□ -1.08
AFP-204ENST00000508838 CPDO75976 1380 aa8.31□□□□□ -1.08
AFP-204ENST00000508838 PARD3Q8TEW0 1356 aa8.31□□□□□ -1.08
AFP-204ENST00000508838 BAG6P46379 1132 aa8.3□□□□□ -1.08
AFP-204ENST00000508838 RAB3GAP2Q9H2M9 1393 aa8.3□□□□□ -1.08
AFP-204ENST00000508838 FAM208AQ9UK61 1670 aaKnown RBP8.3□□□□□ -1.08
AFP-204ENST00000508838 MINK1Q8N4C8 1332 aaPredicted RBP8.29□□□□□ -1.08
AFP-204ENST00000508838 ABCC6O95255 1503 aa8.29□□□□□ -1.08
AFP-204ENST00000508838 LY75O60449 1722 aa8.29□□□□□ -1.08
AFP-204ENST00000508838 DOT1LQ8TEK3 1739 aa8.29□□□□□ -1.08
AFP-204ENST00000508838 FKBP8Q14318 412 aa8.29□□□□□ -1.08
AFP-204ENST00000508838 ANO8Q9HCE9 1232 aaPredicted RBP8.29□□□□□ -1.08
AFP-204ENST00000508838 EIF3AQ14152 1382 aaKnown RBP8.28□□□□□ -1.08
AFP-204ENST00000508838 CHRNA2Q15822 529 aa8.28□□□□□ -1.08
AFP-204ENST00000508838 PTF1AQ7RTS3 328 aa8.28□□□□□ -1.08
AFP-204ENST00000508838 TOGARAM1Q9Y4F4 1720 aa8.28□□□□□ -1.08
AFP-204ENST00000508838 TTLL13PA6NNM8 815 aa8.27□□□□□ -1.09
AFP-204ENST00000508838 WASLO00401 505 aaPredicted RBP8.27□□□□□ -1.09
AFP-204ENST00000508838 TRIM37O94972 964 aa8.27□□□□□ -1.09
AFP-204ENST00000508838 MNX1P50219 401 aaPredicted RBP8.27□□□□□ -1.09
AFP-204ENST00000508838 KIF12Q96FN5 646 aa8.27□□□□□ -1.09
AFP-204ENST00000508838 PDGFDQ9GZP0 370 aaPredicted RBP8.27□□□□□ -1.09
AFP-204ENST00000508838 CCDC9Q9Y3X0 531 aaKnown RBP8.27□□□□□ -1.09
AFP-204ENST00000508838 GPRASP1Q5JY77 1395 aa8.26□□□□□ -1.09
AFP-204ENST00000508838 NINLQ9Y2I6 1382 aa8.26□□□□□ -1.09
AFP-204ENST00000508838 PSME1Q06323 249 aa8.26□□□□□ -1.09
AFP-204ENST00000508838 LMOD2Q6P5Q4 547 aa8.26□□□□□ -1.09
AFP-204ENST00000508838 TSPYL2Q9H2G4 693 aaPredicted RBP8.26□□□□□ -1.09
AFP-204ENST00000508838 PRDM11Q9NQV5 511 aa8.26□□□□□ -1.09
AFP-204ENST00000508838 TRAK1Q9UPV9 953 aa8.26□□□□□ -1.09
AFP-204ENST00000508838 OVOS2A0A0G2JMS6 1433 aa8.26□□□□□ -1.09
AFP-204ENST00000508838 OVOS2A0A0J9YW53 1432 aa8.26□□□□□ -1.09
AFP-204ENST00000508838 BCL9O00512 1426 aa8.26□□□□□ -1.09
AFP-204ENST00000508838 USP6P35125 1406 aa8.26□□□□□ -1.09
AFP-204ENST00000508838 OVOS2Q6IE36 1432 aa8.26□□□□□ -1.09
AFP-204ENST00000508838 TAF1LQ8IZX4 1826 aa8.26□□□□□ -1.09
AFP-204ENST00000508838 SF3B2Q13435 895 aaKnown RBP8.25□□□□□ -1.09
AFP-204ENST00000508838 LARP1Q6PKG0 1096 aaKnown RBP8.25□□□□□ -1.09
AFP-204ENST00000508838 CRB1P82279 1406 aa8.25□□□□□ -1.09
AFP-204ENST00000508838 CPSF1Q10570 1443 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms