RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 ANO8Q9HCE9 1232 aaPredicted RBP13.11□□□□□ -0.31
COL4A3BP-206ENST00000508809 PBX2P40425 430 aa13.1□□□□□ -0.31
COL4A3BP-206ENST00000508809 ZNF454Q8N9F8 522 aa13.1□□□□□ -0.31
COL4A3BP-206ENST00000508809 AFF2P51816 1311 aa13.1□□□□□ -0.31
COL4A3BP-206ENST00000508809 ADGRL3Q9HAR2 1447 aa13.09□□□□□ -0.31
COL4A3BP-206ENST00000508809 ARIH1Q9Y4X5 557 aaPredicted RBP13.09□□□□□ -0.31
COL4A3BP-206ENST00000508809 SRCAPQ6ZRS2 3230 aa13.09□□□□□ -0.31
COL4A3BP-206ENST00000508809 NEXMIFQ5QGS0 1516 aa13.08□□□□□ -0.31
COL4A3BP-206ENST00000508809 VSIG10Q8N0Z9 540 aa13.07□□□□□ -0.32
COL4A3BP-206ENST00000508809 DDX17Q92841 729 aaKnown RBP13.07□□□□□ -0.32
COL4A3BP-206ENST00000508809 QTRT2Q9H974 415 aaKnown RBP13.07□□□□□ -0.32
COL4A3BP-206ENST00000508809 PNPLA6Q8IY17 1366 aa13.07□□□□□ -0.32
COL4A3BP-206ENST00000508809 KIF1BO60333 1816 aa13.06□□□□□ -0.32
COL4A3BP-206ENST00000508809 CLTCL1P53675 1640 aa13.06□□□□□ -0.32
COL4A3BP-206ENST00000508809 RBM6P78332 1123 aaKnown RBP13.06□□□□□ -0.32
COL4A3BP-206ENST00000508809 PDIA6Q15084 440 aa13.06□□□□□ -0.32
COL4A3BP-206ENST00000508809 LAMC1P11047 1609 aa13.06□□□□□ -0.32
COL4A3BP-206ENST00000508809 NALCNQ8IZF0 1738 aa13.05□□□□□ -0.32
COL4A3BP-206ENST00000508809 C1orf167Q5SNV9 1468 aa13.05□□□□□ -0.32
COL4A3BP-206ENST00000508809 ARHGEF1Q92888 912 aaKnown RBP13.05□□□□□ -0.32
COL4A3BP-206ENST00000508809 SOS2Q07890 1332 aaPredicted RBP13.05□□□□□ -0.32
COL4A3BP-206ENST00000508809 FOSBP53539 338 aa13.04□□□□□ -0.32
COL4A3BP-206ENST00000508809 C8orf37Q96NL8 207 aa13.04□□□□□ -0.32
COL4A3BP-206ENST00000508809 NAIPQ13075 1403 aa13.04□□□□□ -0.32
COL4A3BP-206ENST00000508809 PTCH1Q13635 1447 aa13.04□□□□□ -0.32
COL4A3BP-206ENST00000508809 PRAG1Q86YV5 1406 aa13.04□□□□□ -0.32
COL4A3BP-206ENST00000508809 PPARGC1BQ86YN6 1023 aaKnown RBP13.03□□□□□ -0.32
COL4A3BP-206ENST00000508809 RPGRIP1LQ68CZ1 1315 aa13.03□□□□□ -0.32
COL4A3BP-206ENST00000508809 ROBO2Q9HCK4 1378 aa13.03□□□□□ -0.32
COL4A3BP-206ENST00000508809 KCNV2Q8TDN2 545 aa13.02□□□□□ -0.33
COL4A3BP-206ENST00000508809 ORAI2Q96SN7 254 aa13.02□□□□□ -0.33
COL4A3BP-206ENST00000508809 RRBP1Q9P2E9 1410 aaKnown RBP13.02□□□□□ -0.33
COL4A3BP-206ENST00000508809 PHF14O94880 888 aa13.01□□□□□ -0.33
COL4A3BP-206ENST00000508809 FNBP4Q8N3X1 1017 aaPredicted RBP13.01□□□□□ -0.33
COL4A3BP-206ENST00000508809 FBXW7Q969H0 707 aa13.01□□□□□ -0.33
COL4A3BP-206ENST00000508809 ZDHHC16Q969W1 377 aa13.01□□□□□ -0.33
COL4A3BP-206ENST00000508809 NGLY1Q96IV0 654 aa13.01□□□□□ -0.33
COL4A3BP-206ENST00000508809 RGS12O14924 1447 aa13.01□□□□□ -0.33
COL4A3BP-206ENST00000508809 ARHGAP33O14559 1287 aa13□□□□□ -0.33
COL4A3BP-206ENST00000508809 EPAS1Q99814 870 aa13□□□□□ -0.33
COL4A3BP-206ENST00000508809 EP400Q96L91 3159 aa13□□□□□ -0.33
COL4A3BP-206ENST00000508809 HFM1A2PYH4 1435 aa12.99□□□□□ -0.33
COL4A3BP-206ENST00000508809 ADAMTS2O95450 1211 aa12.99□□□□□ -0.33
COL4A3BP-206ENST00000508809 PTGER2P43116 358 aa12.99□□□□□ -0.33
COL4A3BP-206ENST00000508809 TYW1BQ6NUM6 668 aa12.99□□□□□ -0.33
COL4A3BP-206ENST00000508809 KRTAP3-3Q9BYR6 98 aa12.99□□□□□ -0.33
COL4A3BP-206ENST00000508809 KRTAP3-2Q9BYR7 98 aa12.99□□□□□ -0.33
COL4A3BP-206ENST00000508809 PTPREP23469 700 aa12.97□□□□□ -0.33
COL4A3BP-206ENST00000508809 DDX12PQ92771 950 aa12.97□□□□□ -0.33
COL4A3BP-206ENST00000508809 BCL2L12Q9HB09 334 aa12.97□□□□□ -0.33
COL4A3BP-206ENST00000508809 USP21Q9UK80 565 aa12.97□□□□□ -0.33
COL4A3BP-206ENST00000508809 TRPC5Q9UL62 973 aaPredicted RBP12.97□□□□□ -0.33
COL4A3BP-206ENST00000508809 PPLO60437 1756 aa12.97□□□□□ -0.33
COL4A3BP-206ENST00000508809 PCDHGA10Q9Y5H3 936 aa12.96□□□□□ -0.33
COL4A3BP-206ENST00000508809 COL22A1Q8NFW1 1626 aaPredicted RBP12.95□□□□□ -0.34
COL4A3BP-206ENST00000508809 LSM11P83369 360 aaKnown RBP eCLIP12.95□□□□□ -0.34
COL4A3BP-206ENST00000508809 KCNK17Q96T54 332 aa12.95□□□□□ -0.34
COL4A3BP-206ENST00000508809 AXIN2Q9Y2T1 843 aa12.95□□□□□ -0.34
COL4A3BP-206ENST00000508809 NPHP3Q7Z494 1330 aa12.94□□□□□ -0.34
COL4A3BP-206ENST00000508809 ANKRD13DQ6ZTN6 518 aa12.94□□□□□ -0.34
COL4A3BP-206ENST00000508809 KDM2AQ9Y2K7 1162 aa12.94□□□□□ -0.34
COL4A3BP-206ENST00000508809 ATRNO75882 1429 aa12.94□□□□□ -0.34
COL4A3BP-206ENST00000508809 ATAD2Q6PL18 1390 aa12.94□□□□□ -0.34
COL4A3BP-206ENST00000508809 MYOM2P54296 1465 aa12.93□□□□□ -0.34
COL4A3BP-206ENST00000508809 NBR1Q14596 966 aa12.93□□□□□ -0.34
COL4A3BP-206ENST00000508809 ESCO1Q5FWF5 840 aa12.93□□□□□ -0.34
COL4A3BP-206ENST00000508809 BCL9LQ86UU0 1499 aa12.92□□□□□ -0.34
COL4A3BP-206ENST00000508809 GRXCR2A6NFK2 248 aa12.92□□□□□ -0.34
COL4A3BP-206ENST00000508809 CDC42BPGQ6DT37 1551 aa12.92□□□□□ -0.34
COL4A3BP-206ENST00000508809 PXDNQ92626 1479 aa12.91□□□□□ -0.34
COL4A3BP-206ENST00000508809 ADGRF5Q8IZF2 1346 aa12.91□□□□□ -0.34
COL4A3BP-206ENST00000508809 TECPR2O15040 1411 aa12.91□□□□□ -0.34
COL4A3BP-206ENST00000508809 FOXO3O43524 673 aa12.91□□□□□ -0.34
COL4A3BP-206ENST00000508809 ADAM33Q9BZ11 813 aa12.91□□□□□ -0.34
COL4A3BP-206ENST00000508809 PLSCR2Q9NRY7 297 aa12.91□□□□□ -0.34
COL4A3BP-206ENST00000508809 ABCC11Q96J66 1382 aa12.91□□□□□ -0.34
COL4A3BP-206ENST00000508809 MARF1Q9Y4F3 1742 aaKnown RBP12.91□□□□□ -0.34
COL4A3BP-206ENST00000508809 WAPLQ7Z5K2 1190 aa12.9□□□□□ -0.34
COL4A3BP-206ENST00000508809 CCDC125Q86Z20 511 aa12.9□□□□□ -0.34
COL4A3BP-206ENST00000508809 LRPPRCP42704 1394 aaKnown RBP12.9□□□□□ -0.34
COL4A3BP-206ENST00000508809 SPATA31E1Q6ZUB1 1445 aa12.89□□□□□ -0.35
COL4A3BP-206ENST00000508809 PSEN2P49810 448 aa12.89□□□□□ -0.35
COL4A3BP-206ENST00000508809 ANKRD30BQ9BXX2 1392 aa12.89□□□□□ -0.35
COL4A3BP-206ENST00000508809 MAP3K7O43318 606 aa12.88□□□□□ -0.35
COL4A3BP-206ENST00000508809 POTEEQ6S8J3 1075 aa12.88□□□□□ -0.35
COL4A3BP-206ENST00000508809 SIRT1Q96EB6 747 aa12.88□□□□□ -0.35
COL4A3BP-206ENST00000508809 GJD4Q96KN9 370 aaPredicted RBP12.88□□□□□ -0.35
COL4A3BP-206ENST00000508809 XPCQ01831 940 aaPredicted RBP12.87□□□□□ -0.35
COL4A3BP-206ENST00000508809 RGL3Q3MIN7 710 aa12.87□□□□□ -0.35
COL4A3BP-206ENST00000508809 TMEM132EQ6IEE7 984 aa12.87□□□□□ -0.35
COL4A3BP-206ENST00000508809 STK26Q9P289 416 aa12.87□□□□□ -0.35
COL4A3BP-206ENST00000508809 CCDC144AA2RUR9 1427 aa12.87□□□□□ -0.35
COL4A3BP-206ENST00000508809 SPATA31A3Q5VYP0 1347 aa12.87□□□□□ -0.35
COL4A3BP-206ENST00000508809 IFT172Q9UG01 1749 aa12.86□□□□□ -0.35
COL4A3BP-206ENST00000508809 TK2O00142 265 aa12.86□□□□□ -0.35
COL4A3BP-206ENST00000508809 SPNS2Q8IVW8 549 aa12.86□□□□□ -0.35
COL4A3BP-206ENST00000508809 KNDC1Q76NI1 1749 aa12.85□□□□□ -0.35
COL4A3BP-206ENST00000508809 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.85□□□□□ -0.35
COL4A3BP-206ENST00000508809 PLEKHH1Q9ULM0 1364 aa12.85□□□□□ -0.35
COL4A3BP-206ENST00000508809 SLIT2O94813 1529 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms