RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 CDV3Q9UKY7 258 aaKnown RBP14.6□□□□□ -0.07
CHD1-205ENST00000508756 NBPF20Q3BBV1 942 aa14.59□□□□□ -0.07
CHD1-205ENST00000508756 NR3C2P08235 984 aa14.58□□□□□ -0.08
CHD1-205ENST00000508756 NNTQ13423 1086 aa14.58□□□□□ -0.08
CHD1-205ENST00000508756 HPS1Q92902 700 aa14.58□□□□□ -0.08
CHD1-205ENST00000508756 TRAK2O60296 914 aa14.57□□□□□ -0.08
CHD1-205ENST00000508756 GIGYF1O75420 1035 aaPredicted RBP14.57□□□□□ -0.08
CHD1-205ENST00000508756 RAB15P59190 212 aa14.57□□□□□ -0.08
CHD1-205ENST00000508756 NR5A1Q13285 461 aa14.56□□□□□ -0.08
CHD1-205ENST00000508756 PKDCCQ504Y2 493 aa14.56□□□□□ -0.08
CHD1-205ENST00000508756 INTS6LQ5JSJ4 861 aaKnown RBP14.56□□□□□ -0.08
CHD1-205ENST00000508756 MCCD1P59942 119 aaPredicted RBP14.55□□□□□ -0.08
CHD1-205ENST00000508756 SEMA3FQ13275 785 aa14.55□□□□□ -0.08
CHD1-205ENST00000508756 ADAMTS19Q8TE59 1207 aa14.55□□□□□ -0.08
CHD1-205ENST00000508756 TIMELESSQ9UNS1 1208 aa14.55□□□□□ -0.08
CHD1-205ENST00000508756 ESPNB1AK53 854 aa14.54□□□□□ -0.08
CHD1-205ENST00000508756 DGAT1O75907 488 aa14.54□□□□□ -0.08
CHD1-205ENST00000508756 SOX11P35716 441 aa14.54□□□□□ -0.08
CHD1-205ENST00000508756 ZNF592Q92610 1267 aa14.54□□□□□ -0.08
CHD1-205ENST00000508756 CEP126Q9P2H0 1117 aa14.54□□□□□ -0.08
CHD1-205ENST00000508756 ALG2Q9H553 416 aa14.53□□□□□ -0.08
CHD1-205ENST00000508756 CCDC116Q8IYX3 515 aa14.51□□□□□ -0.09
CHD1-205ENST00000508756 ZNF777Q9ULD5 760 aaPredicted RBP14.51□□□□□ -0.09
CHD1-205ENST00000508756 HDGFL1Q5TGJ6 251 aa14.5□□□□□ -0.09
CHD1-205ENST00000508756 AVPP01185 164 aa14.49□□□□□ -0.09
CHD1-205ENST00000508756 WDR4P57081 412 aaKnown RBP14.48□□□□□ -0.09
CHD1-205ENST00000508756 PPP1R26Q5T8A7 1209 aaPredicted RBP14.48□□□□□ -0.09
CHD1-205ENST00000508756 Q6ZNB5 142 aa14.48□□□□□ -0.09
CHD1-205ENST00000508756 GLMNQ92990 594 aa14.48□□□□□ -0.09
CHD1-205ENST00000508756 ERVH48-1M5A8F1 160 aa14.47□□□□□ -0.09
CHD1-205ENST00000508756 SEPT12Q8IYM1 358 aa14.47□□□□□ -0.09
CHD1-205ENST00000508756 KLF16Q9BXK1 252 aaPredicted RBP14.47□□□□□ -0.09
CHD1-205ENST00000508756 TIMP2P16035 220 aa14.46□□□□□ -0.09
CHD1-205ENST00000508756 ITPKCQ96DU7 683 aa14.46□□□□□ -0.09
CHD1-205ENST00000508756 ZFAND3Q9H8U3 227 aa14.46□□□□□ -0.09
CHD1-205ENST00000508756 TMPRSS4Q9NRS4 437 aa14.46□□□□□ -0.09
CHD1-205ENST00000508756 PIK3CDO00329 1044 aa14.45□□□□□ -0.1
CHD1-205ENST00000508756 ZIC2O95409 532 aaPredicted RBP14.45□□□□□ -0.1
CHD1-205ENST00000508756 MYT1Q01538 1121 aa14.45□□□□□ -0.1
CHD1-205ENST00000508756 DHX9Q08211 1270 aaKnown RBP14.45□□□□□ -0.1
CHD1-205ENST00000508756 SLFNL1Q499Z3 407 aa14.45□□□□□ -0.1
CHD1-205ENST00000508756 PHTF2Q8N3S3 785 aa14.45□□□□□ -0.1
CHD1-205ENST00000508756 RNF20Q5VTR2 975 aa14.44□□□□□ -0.1
CHD1-205ENST00000508756 ERICH6Q7L0X2 663 aa14.44□□□□□ -0.1
CHD1-205ENST00000508756 RNF135Q8IUD6 432 aa14.44□□□□□ -0.1
CHD1-205ENST00000508756 CCDC85AQ96PX6 553 aaPredicted RBP14.44□□□□□ -0.1
CHD1-205ENST00000508756 EMILIN1Q9Y6C2 1016 aa14.44□□□□□ -0.1
CHD1-205ENST00000508756 ST8SIA5O15466 376 aa14.43□□□□□ -0.1
CHD1-205ENST00000508756 CALR3Q96L12 384 aaKnown RBP14.43□□□□□ -0.1
CHD1-205ENST00000508756 LCE2BO14633 110 aa14.42□□□□□ -0.1
CHD1-205ENST00000508756 TSGA10IPQ3SY00 556 aa14.42□□□□□ -0.1
CHD1-205ENST00000508756 UCN2Q96RP3 112 aa14.42□□□□□ -0.1
CHD1-205ENST00000508756 PCDHB11Q9Y5F2 797 aa14.42□□□□□ -0.1
CHD1-205ENST00000508756 CAPN5O15484 640 aaPredicted RBP14.41□□□□□ -0.1
CHD1-205ENST00000508756 ZNF784Q8NCA9 323 aaPredicted RBP14.41□□□□□ -0.1
CHD1-205ENST00000508756 PGPEP1Q9NXJ5 209 aa14.41□□□□□ -0.1
CHD1-205ENST00000508756 ARID3CA6NKF2 412 aa14.4□□□□□ -0.1
CHD1-205ENST00000508756 CTC1Q2NKJ3 1217 aa14.4□□□□□ -0.1
CHD1-205ENST00000508756 AXIN1O15169 862 aa14.39□□□□□ -0.11
CHD1-205ENST00000508756 SMCPP49901 116 aaPredicted RBP14.39□□□□□ -0.11
CHD1-205ENST00000508756 CRIPAKQ8N1N5 446 aa14.39□□□□□ -0.11
CHD1-205ENST00000508756 CYLDQ9NQC7 956 aa14.39□□□□□ -0.11
CHD1-205ENST00000508756 AAASQ9NRG9 546 aa14.39□□□□□ -0.11
CHD1-205ENST00000508756 CBLBQ13191 982 aa14.38□□□□□ -0.11
CHD1-205ENST00000508756 CDCA7Q9BWT1 371 aaPredicted RBP14.38□□□□□ -0.11
CHD1-205ENST00000508756 CHIC2Q9UKJ5 165 aa14.37□□□□□ -0.11
CHD1-205ENST00000508756 DOLKQ9UPQ8 538 aa14.37□□□□□ -0.11
CHD1-205ENST00000508756 LILRA1O75019 489 aa14.36□□□□□ -0.11
CHD1-205ENST00000508756 SCTRP47872 440 aa14.36□□□□□ -0.11
CHD1-205ENST00000508756 TRAF7Q6Q0C0 670 aa14.36□□□□□ -0.11
CHD1-205ENST00000508756 CCDC125Q86Z20 511 aa14.36□□□□□ -0.11
CHD1-205ENST00000508756 PLPP7Q8NBV4 271 aa14.36□□□□□ -0.11
CHD1-205ENST00000508756 SKIP12755 728 aa14.35□□□□□ -0.11
CHD1-205ENST00000508756 TBC1D9Q6ZT07 1266 aa14.35□□□□□ -0.11
CHD1-205ENST00000508756 DACH1Q9UI36 760 aa14.35□□□□□ -0.11
CHD1-205ENST00000508756 BMP1P13497 986 aa14.33□□□□□ -0.12
CHD1-205ENST00000508756 ADD1P35611 737 aaKnown RBP14.33□□□□□ -0.12
CHD1-205ENST00000508756 OXLD1Q5BKU9 147 aa14.33□□□□□ -0.12
CHD1-205ENST00000508756 ERVK-9P63128 1117 aa14.32□□□□□ -0.12
CHD1-205ENST00000508756 NFATC2IPQ8NCF5 419 aa14.32□□□□□ -0.12
CHD1-205ENST00000508756 CC2D2BQ6DHV5 1058 aa14.31□□□□□ -0.12
CHD1-205ENST00000508756 MEIOBQ8N635 442 aa14.31□□□□□ -0.12
CHD1-205ENST00000508756 C1orf115Q9H7X2 142 aa14.31□□□□□ -0.12
CHD1-205ENST00000508756 USP17L5A8MUK1 530 aa14.3□□□□□ -0.12
CHD1-205ENST00000508756 MAP7D1Q3KQU3 841 aa14.3□□□□□ -0.12
CHD1-205ENST00000508756 Q6ZVU0 165 aa14.3□□□□□ -0.12
CHD1-205ENST00000508756 DEPDC4Q8N2C3 294 aa14.3□□□□□ -0.12
CHD1-205ENST00000508756 AGBL1Q96MI9 1066 aa14.29□□□□□ -0.12
CHD1-205ENST00000508756 TFIP11Q9UBB9 837 aaKnown RBP14.29□□□□□ -0.12
CHD1-205ENST00000508756 SUPT5HO00267 1087 aaKnown RBP14.28□□□□□ -0.12
CHD1-205ENST00000508756 ATP9BO43861 1147 aa14.28□□□□□ -0.12
CHD1-205ENST00000508756 TRIM46Q7Z4K8 759 aa14.28□□□□□ -0.12
CHD1-205ENST00000508756 PPP1R12CQ9BZL4 782 aa14.28□□□□□ -0.12
CHD1-205ENST00000508756 PALM3A6NDB9 673 aaPredicted RBP14.27□□□□□ -0.13
CHD1-205ENST00000508756 MRPL14Q6P1L8 145 aaKnown RBP14.27□□□□□ -0.13
CHD1-205ENST00000508756 ATP13A2Q9NQ11 1180 aa14.27□□□□□ -0.13
CHD1-205ENST00000508756 ADH1AP07327 375 aa14.26□□□□□ -0.13
CHD1-205ENST00000508756 NCOA4Q13772 614 aa14.26□□□□□ -0.13
CHD1-205ENST00000508756 OSBPL3Q9H4L5 887 aa14.26□□□□□ -0.13
CHD1-205ENST00000508756 USP17L3A6NCW0 530 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms