RNA–Protein interactions for RNA: ENST00000508584.1

NFKB1-207, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 3

Gene NFKB1, Length 751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-207ENST00000508584 SBNO1A3KN83 1393 aa21.32■■□□□ 1
NFKB1-207ENST00000508584 TRPM3Q9HCF6 1732 aaPredicted RBP21.32■■□□□ 1
NFKB1-207ENST00000508584 MARF1Q9Y4F3 1742 aaKnown RBP21.29■■□□□ 1
NFKB1-207ENST00000508584 U2AF1L5P0DN76 240 aaPredicted RBP21.29■■□□□ 1
NFKB1-207ENST00000508584 U2AF1Q01081 240 aaKnown RBP eCLIP21.29■■□□□ 1
NFKB1-207ENST00000508584 ATRNO75882 1429 aa21.29■■□□□ 1
NFKB1-207ENST00000508584 MAP3K19Q56UN5 1328 aa21.29■■□□□ 1
NFKB1-207ENST00000508584 SENP3-EIF4A1A0A087X0R7 540 aa21.28■■□□□ 1
NFKB1-207ENST00000508584 U2SURPO15042 1029 aaKnown RBP21.28■■□□□ 1
NFKB1-207ENST00000508584 LMOD2Q6P5Q4 547 aa21.28■■□□□ 1
NFKB1-207ENST00000508584 CCDC146Q8IYE0 955 aa21.28■■□□□ 1
NFKB1-207ENST00000508584 SPATA31A3Q5VYP0 1347 aa21.28■■□□□ 1
NFKB1-207ENST00000508584 MAP2P11137 1827 aaKnown RBP21.27■■□□□ 1
NFKB1-207ENST00000508584 KCNH5Q8NCM2 988 aa21.27■■□□□ 1
NFKB1-207ENST00000508584 IL13P35225 146 aa21.26■□□□□ 0.99
NFKB1-207ENST00000508584 USP19O94966 1318 aa21.26■□□□□ 0.99
NFKB1-207ENST00000508584 KIF24Q5T7B8 1368 aa21.25■□□□□ 0.99
NFKB1-207ENST00000508584 TNS3Q68CZ2 1445 aa21.25■□□□□ 0.99
NFKB1-207ENST00000508584 RUNDC1Q96C34 613 aa21.25■□□□□ 0.99
NFKB1-207ENST00000508584 BCL9LQ86UU0 1499 aa21.25■□□□□ 0.99
NFKB1-207ENST00000508584 SLIT3O75094 1523 aa21.24■□□□□ 0.99
NFKB1-207ENST00000508584 FLT4P35916 1363 aa21.24■□□□□ 0.99
NFKB1-207ENST00000508584 PEAK1Q9H792 1746 aa21.24■□□□□ 0.99
NFKB1-207ENST00000508584 AMPHP49418 695 aa21.24■□□□□ 0.99
NFKB1-207ENST00000508584 ALS2Q96Q42 1657 aa21.24■□□□□ 0.99
NFKB1-207ENST00000508584 NFAT5O94916 1531 aa21.24■□□□□ 0.99
NFKB1-207ENST00000508584 HAP1P54257 671 aaPredicted RBP21.23■□□□□ 0.99
NFKB1-207ENST00000508584 GJD4Q96KN9 370 aaPredicted RBP21.22■□□□□ 0.99
NFKB1-207ENST00000508584 SALL2Q9Y467 1007 aaPredicted RBP21.22■□□□□ 0.99
NFKB1-207ENST00000508584 RTL1A6NKG5 1358 aa21.22■□□□□ 0.99
NFKB1-207ENST00000508584 ARHGEF10O15013 1369 aa21.22■□□□□ 0.99
NFKB1-207ENST00000508584 APAF1O14727 1248 aa21.21■□□□□ 0.99
NFKB1-207ENST00000508584 GCP02774 474 aa21.21■□□□□ 0.99
NFKB1-207ENST00000508584 EIF4A2Q14240 407 aaKnown RBP21.21■□□□□ 0.99
NFKB1-207ENST00000508584 HSP90AB2PQ58FF8 381 aa21.21■□□□□ 0.99
NFKB1-207ENST00000508584 PNNQ9H307 717 aaKnown RBP21.21■□□□□ 0.99
NFKB1-207ENST00000508584 UNC5CLQ8IV45 518 aa21.2■□□□□ 0.98
NFKB1-207ENST00000508584 NGEFQ8N5V2 710 aa21.2■□□□□ 0.98
NFKB1-207ENST00000508584 FCHSD2O94868 740 aa21.19■□□□□ 0.98
NFKB1-207ENST00000508584 HOXC9P31274 260 aa21.19■□□□□ 0.98
NFKB1-207ENST00000508584 PLEKHG5O94827 1062 aa21.18■□□□□ 0.98
NFKB1-207ENST00000508584 PDE3BQ13370 1112 aa21.17■□□□□ 0.98
NFKB1-207ENST00000508584 PLEKHF1Q96S99 279 aa21.17■□□□□ 0.98
NFKB1-207ENST00000508584 SLIT2O94813 1529 aa21.17■□□□□ 0.98
NFKB1-207ENST00000508584 MAPK8IP3Q9UPT6 1336 aa21.16■□□□□ 0.98
NFKB1-207ENST00000508584 TCP11L2Q8N4U5 519 aa21.16■□□□□ 0.98
NFKB1-207ENST00000508584 IP6K1Q92551 441 aa21.16■□□□□ 0.98
NFKB1-207ENST00000508584 RSPH6AQ9H0K4 717 aa21.16■□□□□ 0.98
NFKB1-207ENST00000508584 ARHGEF25Q86VW2 580 aa21.15■□□□□ 0.98
NFKB1-207ENST00000508584 CABLES1Q8TDN4 633 aa21.15■□□□□ 0.98
NFKB1-207ENST00000508584 ZBTB7CA1YPR0 619 aa21.14■□□□□ 0.97
NFKB1-207ENST00000508584 HMOX1P09601 288 aa21.14■□□□□ 0.97
NFKB1-207ENST00000508584 ZNF521Q96K83 1311 aa21.13■□□□□ 0.97
NFKB1-207ENST00000508584 PRKAR2BP31323 418 aa21.13■□□□□ 0.97
NFKB1-207ENST00000508584 NCBP3Q53F19 620 aaKnown RBP21.13■□□□□ 0.97
NFKB1-207ENST00000508584 CCDC125Q86Z20 511 aa21.13■□□□□ 0.97
NFKB1-207ENST00000508584 PHRF1Q9P1Y6 1649 aaKnown RBP21.12■□□□□ 0.97
NFKB1-207ENST00000508584 NEFMP07197 916 aa21.12■□□□□ 0.97
NFKB1-207ENST00000508584 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.12■□□□□ 0.97
NFKB1-207ENST00000508584 RRP7AQ9Y3A4 280 aaKnown RBP21.11■□□□□ 0.97
NFKB1-207ENST00000508584 LTN1O94822 1766 aa21.1■□□□□ 0.97
NFKB1-207ENST00000508584 SULT6B1Q6IMI4 303 aa21.1■□□□□ 0.97
NFKB1-207ENST00000508584 RGPD1P0DJD0 1748 aa21.09■□□□□ 0.97
NFKB1-207ENST00000508584 ZC3H6P61129 1189 aaKnown RBP21.09■□□□□ 0.97
NFKB1-207ENST00000508584 VPS72Q15906 364 aa21.09■□□□□ 0.97
NFKB1-207ENST00000508584 CCDC9Q9Y3X0 531 aaKnown RBP21.09■□□□□ 0.97
NFKB1-207ENST00000508584 IGSF1Q8N6C5 1336 aa21.08■□□□□ 0.97
NFKB1-207ENST00000508584 GLI3P10071 1580 aa21.08■□□□□ 0.97
NFKB1-207ENST00000508584 TMPOP42166 694 aaKnown RBP21.08■□□□□ 0.97
NFKB1-207ENST00000508584 NEUROD2Q15784 382 aa21.08■□□□□ 0.97
NFKB1-207ENST00000508584 CCDC27Q2M243 656 aa21.08■□□□□ 0.97
NFKB1-207ENST00000508584 AEBP1Q8IUX7 1158 aa21.08■□□□□ 0.97
NFKB1-207ENST00000508584 LTV1Q96GA3 475 aaPredicted RBP21.08■□□□□ 0.97
NFKB1-207ENST00000508584 EYA1Q99502 592 aa21.08■□□□□ 0.97
NFKB1-207ENST00000508584 GOLGA2Q08379 1002 aa21.07■□□□□ 0.96
NFKB1-207ENST00000508584 WWC1Q8IX03 1113 aa21.07■□□□□ 0.96
NFKB1-207ENST00000508584 CDCA7LQ96GN5 454 aa21.07■□□□□ 0.96
NFKB1-207ENST00000508584 CRYBG1Q9Y4K1 1723 aa21.07■□□□□ 0.96
NFKB1-207ENST00000508584 PHACTR3Q96KR7 559 aa21.06■□□□□ 0.96
NFKB1-207ENST00000508584 CPDO75976 1380 aa21.06■□□□□ 0.96
NFKB1-207ENST00000508584 FAM83GA6ND36 823 aa21.05■□□□□ 0.96
NFKB1-207ENST00000508584 SEPT12Q8IYM1 358 aa21.05■□□□□ 0.96
NFKB1-207ENST00000508584 KDRP35968 1356 aa21.05■□□□□ 0.96
NFKB1-207ENST00000508584 NFE2L2Q16236 605 aa21.04■□□□□ 0.96
NFKB1-207ENST00000508584 ABCC6O95255 1503 aa21.04■□□□□ 0.96
NFKB1-207ENST00000508584 RIPK4P57078 832 aa21.03■□□□□ 0.96
NFKB1-207ENST00000508584 ANKRD24Q8TF21 1146 aa21.03■□□□□ 0.96
NFKB1-207ENST00000508584 KIAA0232Q92628 1395 aa21.02■□□□□ 0.96
NFKB1-207ENST00000508584 ABCA3Q99758 1704 aa21.02■□□□□ 0.96
NFKB1-207ENST00000508584 NWD2Q9ULI1 1742 aa21.02■□□□□ 0.96
NFKB1-207ENST00000508584 ONECUT3O60422 494 aaPredicted RBP21.02■□□□□ 0.96
NFKB1-207ENST00000508584 SLFN5Q08AF3 891 aa21.02■□□□□ 0.96
NFKB1-207ENST00000508584 WDR63Q8IWG1 891 aa21.02■□□□□ 0.96
NFKB1-207ENST00000508584 AXIN2Q9Y2T1 843 aa21.02■□□□□ 0.96
NFKB1-207ENST00000508584 PLCH1Q4KWH8 1693 aa21.02■□□□□ 0.95
NFKB1-207ENST00000508584 E9PSI1 815 aa21.01■□□□□ 0.95
NFKB1-207ENST00000508584 TRIM35Q9UPQ4 493 aa21.01■□□□□ 0.95
NFKB1-207ENST00000508584 SF3B2Q13435 895 aaKnown RBP21■□□□□ 0.95
NFKB1-207ENST00000508584 BTG4Q9NY30 223 aa21■□□□□ 0.95
NFKB1-207ENST00000508584 A0A0G2JS52 829 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms