RNA–Protein interactions for RNA: ENST00000508126.1

SPSB4-203, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

TSL 2

Gene SPSB4, Length 1,752 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-203ENST00000508126 HOXC9P31274 260 aa21.34■■□□□ 1.01
SPSB4-203ENST00000508126 PRKAR2BP31323 418 aa21.34■■□□□ 1.01
SPSB4-203ENST00000508126 CCDC27Q2M243 656 aa21.34■■□□□ 1.01
SPSB4-203ENST00000508126 CDCA7LQ96GN5 454 aa21.34■■□□□ 1.01
SPSB4-203ENST00000508126 RRP7AQ9Y3A4 280 aaKnown RBP21.34■■□□□ 1.01
SPSB4-203ENST00000508126 LTN1O94822 1766 aa21.34■■□□□ 1.01
SPSB4-203ENST00000508126 GCP02774 474 aa21.33■■□□□ 1.01
SPSB4-203ENST00000508126 NEFLP07196 543 aa21.33■■□□□ 1.01
SPSB4-203ENST00000508126 NEUROD2Q15784 382 aa21.33■■□□□ 1.01
SPSB4-203ENST00000508126 ARHGEF10O15013 1369 aa21.33■■□□□ 1
SPSB4-203ENST00000508126 WWC1Q8IX03 1113 aa21.33■■□□□ 1
SPSB4-203ENST00000508126 SUPT16HQ9Y5B9 1047 aaKnown RBP21.32■■□□□ 1
SPSB4-203ENST00000508126 SPATA31A3Q5VYP0 1347 aa21.32■■□□□ 1
SPSB4-203ENST00000508126 RGPD1P0DJD0 1748 aa21.32■■□□□ 1
SPSB4-203ENST00000508126 PHF23Q9BUL5 403 aaPredicted RBP21.31■■□□□ 1
SPSB4-203ENST00000508126 PHRF1Q9P1Y6 1649 aaKnown RBP21.31■■□□□ 1
SPSB4-203ENST00000508126 TMPOP42166 694 aaKnown RBP21.31■■□□□ 1
SPSB4-203ENST00000508126 IP6K1Q92551 441 aa21.3■■□□□ 1
SPSB4-203ENST00000508126 E9PSI1 815 aa21.29■■□□□ 1
SPSB4-203ENST00000508126 SOS2Q07890 1332 aaPredicted RBP21.29■■□□□ 1
SPSB4-203ENST00000508126 MED1Q15648 1581 aaPredicted RBP21.29■■□□□ 1
SPSB4-203ENST00000508126 SLFN5Q08AF3 891 aa21.28■■□□□ 1
SPSB4-203ENST00000508126 SULT6B1Q6IMI4 303 aa21.28■■□□□ 1
SPSB4-203ENST00000508126 PLEKHG5O94827 1062 aa21.28■■□□□ 1
SPSB4-203ENST00000508126 ARHGEF25Q86VW2 580 aa21.28■■□□□ 1
SPSB4-203ENST00000508126 WDR63Q8IWG1 891 aa21.28■■□□□ 1
SPSB4-203ENST00000508126 NHSL1Q5SYE7 1610 aa21.26■□□□□ 0.99
SPSB4-203ENST00000508126 ZBTB7CA1YPR0 619 aa21.26■□□□□ 0.99
SPSB4-203ENST00000508126 IGSF1Q8N6C5 1336 aa21.26■□□□□ 0.99
SPSB4-203ENST00000508126 RIPK4P57078 832 aa21.25■□□□□ 0.99
SPSB4-203ENST00000508126 NFE2L2Q16236 605 aa21.25■□□□□ 0.99
SPSB4-203ENST00000508126 DUSP27Q5VZP5 1158 aa21.25■□□□□ 0.99
SPSB4-203ENST00000508126 AEBP1Q8IUX7 1158 aa21.25■□□□□ 0.99
SPSB4-203ENST00000508126 KDRP35968 1356 aa21.25■□□□□ 0.99
SPSB4-203ENST00000508126 PHACTR3Q96KR7 559 aa21.25■□□□□ 0.99
SPSB4-203ENST00000508126 TRMT2AQ8IZ69 625 aaKnown RBP21.24■□□□□ 0.99
SPSB4-203ENST00000508126 EYA1Q99502 592 aa21.24■□□□□ 0.99
SPSB4-203ENST00000508126 AEBP2Q6ZN18 517 aaPredicted RBP21.23■□□□□ 0.99
SPSB4-203ENST00000508126 LTV1Q96GA3 475 aaPredicted RBP21.23■□□□□ 0.99
SPSB4-203ENST00000508126 RCAN3Q9UKA8 241 aa21.23■□□□□ 0.99
SPSB4-203ENST00000508126 SPINK5Q9NQ38 1064 aaPredicted RBP21.22■□□□□ 0.99
SPSB4-203ENST00000508126 TRIM35Q9UPQ4 493 aa21.22■□□□□ 0.99
SPSB4-203ENST00000508126 CRYBG1Q9Y4K1 1723 aa21.21■□□□□ 0.99
SPSB4-203ENST00000508126 LMOD3Q0VAK6 560 aa21.2■□□□□ 0.99
SPSB4-203ENST00000508126 FKBP8Q14318 412 aa21.2■□□□□ 0.99
SPSB4-203ENST00000508126 ZC3H6P61129 1189 aaKnown RBP21.2■□□□□ 0.98
SPSB4-203ENST00000508126 MYH16Q9H6N6 1097 aa21.2■□□□□ 0.98
SPSB4-203ENST00000508126 ROBO1Q9Y6N7 1651 aa21.19■□□□□ 0.98
SPSB4-203ENST00000508126 ABCC6O95255 1503 aa21.19■□□□□ 0.98
SPSB4-203ENST00000508126 IL16Q14005 1332 aa21.19■□□□□ 0.98
SPSB4-203ENST00000508126 CABLES1Q8TDN4 633 aa21.18■□□□□ 0.98
SPSB4-203ENST00000508126 RNF123Q5XPI4 1314 aa21.18■□□□□ 0.98
SPSB4-203ENST00000508126 CPDO75976 1380 aa21.17■□□□□ 0.98
SPSB4-203ENST00000508126 CALD1Q05682 793 aaKnown RBP21.17■□□□□ 0.98
SPSB4-203ENST00000508126 AHDC1Q5TGY3 1603 aaPredicted RBP21.16■□□□□ 0.98
SPSB4-203ENST00000508126 ANKRD24Q8TF21 1146 aa21.15■□□□□ 0.98
SPSB4-203ENST00000508126 HAP1P54257 671 aaPredicted RBP21.14■□□□□ 0.97
SPSB4-203ENST00000508126 KIAA0232Q92628 1395 aa21.13■□□□□ 0.97
SPSB4-203ENST00000508126 GAS2L2Q8NHY3 880 aa21.13■□□□□ 0.97
SPSB4-203ENST00000508126 DLG5Q8TDM6 1919 aa21.13■□□□□ 0.97
SPSB4-203ENST00000508126 NBPF6Q5VWK0 638 aa21.13■□□□□ 0.97
SPSB4-203ENST00000508126 NBPF4Q96M43 638 aa21.13■□□□□ 0.97
SPSB4-203ENST00000508126 AXIN2Q9Y2T1 843 aa21.13■□□□□ 0.97
SPSB4-203ENST00000508126 ERBB3P21860 1342 aa21.12■□□□□ 0.97
SPSB4-203ENST00000508126 TOM1O60784 492 aa21.12■□□□□ 0.97
SPSB4-203ENST00000508126 USHBP1Q8N6Y0 703 aa21.12■□□□□ 0.97
SPSB4-203ENST00000508126 LRRC59Q96AG4 307 aaKnown RBP21.12■□□□□ 0.97
SPSB4-203ENST00000508126 ABCA3Q99758 1704 aa21.11■□□□□ 0.97
SPSB4-203ENST00000508126 COL18A1P39060 1754 aa21.11■□□□□ 0.97
SPSB4-203ENST00000508126 RRP1P56182 461 aaKnown RBP21.11■□□□□ 0.97
SPSB4-203ENST00000508126 NCAPD2Q15021 1401 aa21.11■□□□□ 0.97
SPSB4-203ENST00000508126 CAMTA1Q9Y6Y1 1673 aa21.11■□□□□ 0.97
SPSB4-203ENST00000508126 IRX6P78412 446 aaPredicted RBP21.1■□□□□ 0.97
SPSB4-203ENST00000508126 FANCIQ9NVI1 1328 aa21.1■□□□□ 0.97
SPSB4-203ENST00000508126 PRDM11Q9NQV5 511 aa21.1■□□□□ 0.97
SPSB4-203ENST00000508126 MTHFSDQ2M296 383 aaKnown RBP21.09■□□□□ 0.97
SPSB4-203ENST00000508126 ERICH6BQ5W0A0 696 aa21.09■□□□□ 0.97
SPSB4-203ENST00000508126 RGPD5Q99666 1765 aa21.09■□□□□ 0.97
SPSB4-203ENST00000508126 RGPD2P0DJD1 1756 aa21.08■□□□□ 0.97
SPSB4-203ENST00000508126 CHRNA2Q15822 529 aa21.08■□□□□ 0.97
SPSB4-203ENST00000508126 IFT57Q9NWB7 429 aa21.08■□□□□ 0.96
SPSB4-203ENST00000508126 FAM208AQ9UK61 1670 aaKnown RBP21.07■□□□□ 0.96
SPSB4-203ENST00000508126 GNAI1P63096 354 aa21.07■□□□□ 0.96
SPSB4-203ENST00000508126 RTF1Q92541 710 aaKnown RBP21.07■□□□□ 0.96
SPSB4-203ENST00000508126 THUMPD2Q9BTF0 503 aaKnown RBP21.07■□□□□ 0.96
SPSB4-203ENST00000508126 FAM83GA6ND36 823 aa21.06■□□□□ 0.96
SPSB4-203ENST00000508126 TSR2Q969E8 191 aaKnown RBP21.06■□□□□ 0.96
SPSB4-203ENST00000508126 LMO7Q8WWI1 1683 aa21.06■□□□□ 0.96
SPSB4-203ENST00000508126 CT47B1P0C2W7 299 aaPredicted RBP21.05■□□□□ 0.96
SPSB4-203ENST00000508126 CSB-PGBD3P0DP91 1061 aa21.05■□□□□ 0.96
SPSB4-203ENST00000508126 HTATSF1O43719 755 aaKnown RBP21.04■□□□□ 0.96
SPSB4-203ENST00000508126 NLRP2Q9NX02 1062 aa21.04■□□□□ 0.96
SPSB4-203ENST00000508126 LAS1LQ9Y4W2 734 aaKnown RBP21.04■□□□□ 0.96
SPSB4-203ENST00000508126 PHLPP1O60346 1717 aa21.04■□□□□ 0.96
SPSB4-203ENST00000508126 COL22A1Q8NFW1 1626 aaPredicted RBP21.03■□□□□ 0.96
SPSB4-203ENST00000508126 DCTN1Q14203 1278 aa21.03■□□□□ 0.96
SPSB4-203ENST00000508126 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.03■□□□□ 0.96
SPSB4-203ENST00000508126 MAP3K5Q99683 1374 aa21.03■□□□□ 0.96
SPSB4-203ENST00000508126 GNAT3A8MTJ3 354 aa21.02■□□□□ 0.96
SPSB4-203ENST00000508126 PIP4K2BP78356 416 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms