RNA–Protein interactions for RNA: ENST00000507411.5

CLDND1-214, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 815 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-214ENST00000507411 PEAK1Q9H792 1746 aa11.92□□□□□ -0.5
CLDND1-214ENST00000507411 FAM161AQ3B820 660 aa11.92□□□□□ -0.5
CLDND1-214ENST00000507411 TNS2Q63HR2 1409 aa11.92□□□□□ -0.5
CLDND1-214ENST00000507411 SSH2Q76I76 1423 aa11.92□□□□□ -0.5
CLDND1-214ENST00000507411 KIAA0232Q92628 1395 aa11.92□□□□□ -0.5
CLDND1-214ENST00000507411 SPDYE1Q8NFV5 336 aaPredicted RBP11.91□□□□□ -0.5
CLDND1-214ENST00000507411 STK26Q9P289 416 aa11.91□□□□□ -0.5
CLDND1-214ENST00000507411 PARP4Q9UKK3 1724 aaKnown RBP11.91□□□□□ -0.5
CLDND1-214ENST00000507411 HSPA1AP0DMV8 641 aaKnown RBP11.9□□□□□ -0.5
CLDND1-214ENST00000507411 HSPA1BP0DMV9 641 aaKnown RBP11.9□□□□□ -0.5
CLDND1-214ENST00000507411 ALS2Q96Q42 1657 aa11.9□□□□□ -0.5
CLDND1-214ENST00000507411 LARP1Q6PKG0 1096 aaKnown RBP11.89□□□□□ -0.51
CLDND1-214ENST00000507411 THRAP3Q9Y2W1 955 aaKnown RBP11.89□□□□□ -0.51
CLDND1-214ENST00000507411 TOPAZ1Q8N9V7 1692 aa11.89□□□□□ -0.51
CLDND1-214ENST00000507411 ATP7BP35670 1465 aa11.89□□□□□ -0.51
CLDND1-214ENST00000507411 TRPM3Q9HCF6 1732 aaPredicted RBP11.89□□□□□ -0.51
CLDND1-214ENST00000507411 KANK4Q5T7N3 995 aaPredicted RBP11.88□□□□□ -0.51
CLDND1-214ENST00000507411 PMFBP1Q8TBY8 1022 aa11.88□□□□□ -0.51
CLDND1-214ENST00000507411 PLEKHH1Q9ULM0 1364 aa11.88□□□□□ -0.51
CLDND1-214ENST00000507411 IFT172Q9UG01 1749 aa11.88□□□□□ -0.51
CLDND1-214ENST00000507411 CRYBG1Q9Y4K1 1723 aa11.88□□□□□ -0.51
CLDND1-214ENST00000507411 CLTCL1P53675 1640 aa11.87□□□□□ -0.51
CLDND1-214ENST00000507411 PIP4P2Q8N4L2 257 aa11.87□□□□□ -0.51
CLDND1-214ENST00000507411 SLC16A10Q8TF71 515 aa11.87□□□□□ -0.51
CLDND1-214ENST00000507411 CLEC11AQ9Y240 323 aa11.87□□□□□ -0.51
CLDND1-214ENST00000507411 GPRASP1Q5JY77 1395 aa11.87□□□□□ -0.51
CLDND1-214ENST00000507411 NUP155O75694 1391 aa11.85□□□□□ -0.51
CLDND1-214ENST00000507411 ZC3H6P61129 1189 aaKnown RBP11.85□□□□□ -0.51
CLDND1-214ENST00000507411 ARHGEF28Q8N1W1 1705 aaKnown RBP11.85□□□□□ -0.51
CLDND1-214ENST00000507411 KIF1BO60333 1816 aa11.84□□□□□ -0.51
CLDND1-214ENST00000507411 DDB1Q16531 1140 aa11.84□□□□□ -0.51
CLDND1-214ENST00000507411 TULP4Q9NRJ4 1543 aa11.84□□□□□ -0.51
CLDND1-214ENST00000507411 PAK3O75914 559 aaPredicted RBP11.83□□□□□ -0.52
CLDND1-214ENST00000507411 FXR2P51116 673 aaKnown RBP eCLIP11.83□□□□□ -0.52
CLDND1-214ENST00000507411 ZNF827Q17R98 1081 aa11.83□□□□□ -0.52
CLDND1-214ENST00000507411 RBM46Q8TBY0 533 aaKnown RBP11.83□□□□□ -0.52
CLDND1-214ENST00000507411 COL24A1Q17RW2 1714 aa11.83□□□□□ -0.52
CLDND1-214ENST00000507411 LRRC37A3O60309 1634 aa11.82□□□□□ -0.52
CLDND1-214ENST00000507411 PAPPAQ13219 1627 aa11.82□□□□□ -0.52
CLDND1-214ENST00000507411 ABCC11Q96J66 1382 aa11.81□□□□□ -0.52
CLDND1-214ENST00000507411 C16orf71Q8IYS4 520 aaPredicted RBP11.81□□□□□ -0.52
CLDND1-214ENST00000507411 ACIN1Q9UKV3 1341 aaKnown RBP11.81□□□□□ -0.52
CLDND1-214ENST00000507411 KNDC1Q76NI1 1749 aa11.8□□□□□ -0.52
CLDND1-214ENST00000507411 BCL9O00512 1426 aa11.8□□□□□ -0.52
CLDND1-214ENST00000507411 PHRF1Q9P1Y6 1649 aaKnown RBP11.8□□□□□ -0.52
CLDND1-214ENST00000507411 MLLT1Q03111 559 aaPredicted RBP11.8□□□□□ -0.52
CLDND1-214ENST00000507411 FSTL1Q12841 308 aa11.8□□□□□ -0.52
CLDND1-214ENST00000507411 RPGRIP1LQ68CZ1 1315 aa11.8□□□□□ -0.52
CLDND1-214ENST00000507411 ANKARQ7Z5J8 1434 aa11.79□□□□□ -0.52
CLDND1-214ENST00000507411 MARCH10Q8NA82 808 aaPredicted RBP11.79□□□□□ -0.52
CLDND1-214ENST00000507411 AKAP12Q02952 1782 aa11.78□□□□□ -0.52
CLDND1-214ENST00000507411 NMRK2Q9NPI5 230 aa11.78□□□□□ -0.52
CLDND1-214ENST00000507411 CRB1P82279 1406 aa11.77□□□□□ -0.53
CLDND1-214ENST00000507411 TMEM132EQ6IEE7 984 aa11.76□□□□□ -0.53
CLDND1-214ENST00000507411 QSER1Q2KHR3 1735 aa11.76□□□□□ -0.53
CLDND1-214ENST00000507411 USP19O94966 1318 aa11.76□□□□□ -0.53
CLDND1-214ENST00000507411 PNPLA7Q6ZV29 1317 aa11.76□□□□□ -0.53
CLDND1-214ENST00000507411 PPLO60437 1756 aa11.76□□□□□ -0.53
CLDND1-214ENST00000507411 ANKRD30BQ9BXX2 1392 aa11.76□□□□□ -0.53
CLDND1-214ENST00000507411 LMO7Q8WWI1 1683 aa11.75□□□□□ -0.53
CLDND1-214ENST00000507411 NGDNQ8NEJ9 315 aaKnown RBP11.75□□□□□ -0.53
CLDND1-214ENST00000507411 CD2APQ9Y5K6 639 aa11.75□□□□□ -0.53
CLDND1-214ENST00000507411 KIAA1210Q9ULL0 1709 aa11.74□□□□□ -0.53
CLDND1-214ENST00000507411 SPDYE4A6NLX3 237 aa11.74□□□□□ -0.53
CLDND1-214ENST00000507411 NUTM2GQ5VZR2 741 aa11.74□□□□□ -0.53
CLDND1-214ENST00000507411 TFCP2L1Q9NZI6 479 aa11.74□□□□□ -0.53
CLDND1-214ENST00000507411 COL5A2P05997 1499 aaPredicted RBP11.74□□□□□ -0.53
CLDND1-214ENST00000507411 SAFB2Q14151 953 aaKnown RBP eCLIP11.73□□□□□ -0.53
CLDND1-214ENST00000507411 FAM50AQ14320 339 aaKnown RBP11.73□□□□□ -0.53
CLDND1-214ENST00000507411 SIRT1Q96EB6 747 aa11.73□□□□□ -0.53
CLDND1-214ENST00000507411 YTHDC2Q9H6S0 1430 aaKnown RBP11.73□□□□□ -0.53
CLDND1-214ENST00000507411 CPDO75976 1380 aa11.72□□□□□ -0.53
CLDND1-214ENST00000507411 PRR29P0C7W0 189 aa11.72□□□□□ -0.53
CLDND1-214ENST00000507411 PRDM10Q9NQV6 1147 aa11.72□□□□□ -0.53
CLDND1-214ENST00000507411 LRRC4BQ9NT99 713 aa11.72□□□□□ -0.53
CLDND1-214ENST00000507411 BRD4O60885 1362 aaPredicted RBP11.71□□□□□ -0.53
CLDND1-214ENST00000507411 ADGRF5Q8IZF2 1346 aa11.71□□□□□ -0.53
CLDND1-214ENST00000507411 ABHD8Q96I13 439 aa11.71□□□□□ -0.53
CLDND1-214ENST00000507411 CDCA7Q9BWT1 371 aaPredicted RBP11.71□□□□□ -0.53
CLDND1-214ENST00000507411 NHSQ6T4R5 1651 aa11.71□□□□□ -0.54
CLDND1-214ENST00000507411 VPS8Q8N3P4 1428 aa11.7□□□□□ -0.54
CLDND1-214ENST00000507411 TOM1L2Q6ZVM7 507 aa11.7□□□□□ -0.54
CLDND1-214ENST00000507411 HIRIP3Q9BW71 556 aaPredicted RBP11.7□□□□□ -0.54
CLDND1-214ENST00000507411 IGSF1Q8N6C5 1336 aa11.69□□□□□ -0.54
CLDND1-214ENST00000507411 PRKAR2AP13861 404 aaKnown RBP11.69□□□□□ -0.54
CLDND1-214ENST00000507411 ACSBG1Q96GR2 724 aa11.69□□□□□ -0.54
CLDND1-214ENST00000507411 TUBGCP6Q96RT7 1819 aa11.69□□□□□ -0.54
CLDND1-214ENST00000507411 WNK3Q9BYP7 1800 aa11.69□□□□□ -0.54
CLDND1-214ENST00000507411 EIF3AQ14152 1382 aaKnown RBP11.68□□□□□ -0.54
CLDND1-214ENST00000507411 PDE4DIPQ5VU43 2346 aa11.68□□□□□ -0.54
CLDND1-214ENST00000507411 FOXN1O15353 648 aa11.68□□□□□ -0.54
CLDND1-214ENST00000507411 RGS19P49795 217 aa11.68□□□□□ -0.54
CLDND1-214ENST00000507411 MSL1Q68DK7 614 aa11.68□□□□□ -0.54
CLDND1-214ENST00000507411 SMC1BQ8NDV3 1235 aa11.68□□□□□ -0.54
CLDND1-214ENST00000507411 PRAM1Q96QH2 718 aa11.68□□□□□ -0.54
CLDND1-214ENST00000507411 CICQ96RK0 1608 aaPredicted RBP11.68□□□□□ -0.54
CLDND1-214ENST00000507411 EXOC5O00471 708 aa11.67□□□□□ -0.54
CLDND1-214ENST00000507411 SLC27A3Q5K4L6 730 aa11.67□□□□□ -0.54
CLDND1-214ENST00000507411 BTAF1O14981 1849 aa11.67□□□□□ -0.54
CLDND1-214ENST00000507411 PRR36Q9H6K5 1346 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms