RNA–Protein interactions for RNA: ENST00000506929.1

CDC42SE2-210, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-210ENST00000506929 APBB1O00213 710 aa7.32□□□□□ -1.24
CDC42SE2-210ENST00000506929 RAD21O60216 631 aa7.32□□□□□ -1.24
CDC42SE2-210ENST00000506929 GIGYF1O75420 1035 aaPredicted RBP7.32□□□□□ -1.24
CDC42SE2-210ENST00000506929 TSGA10IPQ3SY00 556 aa7.32□□□□□ -1.24
CDC42SE2-210ENST00000506929 VASH1Q7L8A9 365 aaPredicted RBP7.32□□□□□ -1.24
CDC42SE2-210ENST00000506929 DZIP3Q86Y13 1208 aaKnown RBP7.32□□□□□ -1.24
CDC42SE2-210ENST00000506929 ADH1CP00326 375 aa7.31□□□□□ -1.24
CDC42SE2-210ENST00000506929 FSHRP23945 695 aa7.31□□□□□ -1.24
CDC42SE2-210ENST00000506929 PROSER2Q86WR7 435 aaPredicted RBP7.31□□□□□ -1.24
CDC42SE2-210ENST00000506929 SLC10A4Q96EP9 437 aa7.31□□□□□ -1.24
CDC42SE2-210ENST00000506929 KCTD15Q96SI1 283 aaPredicted RBP7.31□□□□□ -1.24
CDC42SE2-210ENST00000506929 NNTQ13423 1086 aa7.3□□□□□ -1.24
CDC42SE2-210ENST00000506929 INTS6LQ5JSJ4 861 aaKnown RBP7.3□□□□□ -1.24
CDC42SE2-210ENST00000506929 PRM3Q9NNZ6 103 aa7.3□□□□□ -1.24
CDC42SE2-210ENST00000506929 TMPRSS4Q9NRS4 437 aa7.3□□□□□ -1.24
CDC42SE2-210ENST00000506929 DACH1Q9UI36 760 aa7.3□□□□□ -1.24
CDC42SE2-210ENST00000506929 TIMELESSQ9UNS1 1208 aa7.3□□□□□ -1.24
CDC42SE2-210ENST00000506929 MAP4K5Q9Y4K4 846 aa7.3□□□□□ -1.24
CDC42SE2-210ENST00000506929 A6NJR5 290 aa7.29□□□□□ -1.24
CDC42SE2-210ENST00000506929 NR5A1Q13285 461 aa7.29□□□□□ -1.24
CDC42SE2-210ENST00000506929 KLF16Q9BXK1 252 aaPredicted RBP7.29□□□□□ -1.24
CDC42SE2-210ENST00000506929 ZNF777Q9ULD5 760 aaPredicted RBP7.29□□□□□ -1.24
CDC42SE2-210ENST00000506929 ZNF330Q9Y3S2 320 aaPredicted RBP7.29□□□□□ -1.24
CDC42SE2-210ENST00000506929 POTECB2RU33 542 aa7.28□□□□□ -1.24
CDC42SE2-210ENST00000506929 PIK3CDO00329 1044 aa7.28□□□□□ -1.24
CDC42SE2-210ENST00000506929 CAPN5O15484 640 aaPredicted RBP7.28□□□□□ -1.24
CDC42SE2-210ENST00000506929 C14orf37Q86TY3 774 aa7.28□□□□□ -1.24
CDC42SE2-210ENST00000506929 ZMYND15Q9H091 742 aa7.28□□□□□ -1.24
CDC42SE2-210ENST00000506929 ZFAND3Q9H8U3 227 aa7.28□□□□□ -1.24
CDC42SE2-210ENST00000506929 ATP13A2Q9NQ11 1180 aa7.28□□□□□ -1.24
CDC42SE2-210ENST00000506929 CEP126Q9P2H0 1117 aa7.28□□□□□ -1.24
CDC42SE2-210ENST00000506929 ESPNB1AK53 854 aa7.27□□□□□ -1.25
CDC42SE2-210ENST00000506929 TRAK2O60296 914 aa7.27□□□□□ -1.25
CDC42SE2-210ENST00000506929 ITPKCQ96DU7 683 aa7.27□□□□□ -1.25
CDC42SE2-210ENST00000506929 ALG2Q9H553 416 aa7.27□□□□□ -1.25
CDC42SE2-210ENST00000506929 CDV3Q9UKY7 258 aaKnown RBP7.27□□□□□ -1.25
CDC42SE2-210ENST00000506929 ARID3CA6NKF2 412 aa7.26□□□□□ -1.25
CDC42SE2-210ENST00000506929 ERVH48-1M5A8F1 160 aa7.26□□□□□ -1.25
CDC42SE2-210ENST00000506929 WASHC4Q2M389 1173 aa7.26□□□□□ -1.25
CDC42SE2-210ENST00000506929 HDGFL1Q5TGJ6 251 aa7.26□□□□□ -1.25
CDC42SE2-210ENST00000506929 CCDC85AQ96PX6 553 aaPredicted RBP7.26□□□□□ -1.25
CDC42SE2-210ENST00000506929 CDCA7Q9BWT1 371 aaPredicted RBP7.26□□□□□ -1.25
CDC42SE2-210ENST00000506929 GMPR2Q9P2T1 348 aaKnown RBP7.26□□□□□ -1.25
CDC42SE2-210ENST00000506929 C11orf95C9JLR9 678 aaPredicted RBP7.25□□□□□ -1.25
CDC42SE2-210ENST00000506929 TIMP2P16035 220 aa7.25□□□□□ -1.25
CDC42SE2-210ENST00000506929 WDR4P57081 412 aaKnown RBP7.25□□□□□ -1.25
CDC42SE2-210ENST00000506929 CBLBQ13191 982 aa7.25□□□□□ -1.25
CDC42SE2-210ENST00000506929 PPP1R26Q5T8A7 1209 aaPredicted RBP7.25□□□□□ -1.25
CDC42SE2-210ENST00000506929 PHTF2Q8N3S3 785 aa7.25□□□□□ -1.25
CDC42SE2-210ENST00000506929 SENP2Q9HC62 589 aa7.25□□□□□ -1.25
CDC42SE2-210ENST00000506929 ZIC2O95409 532 aaPredicted RBP7.24□□□□□ -1.25
CDC42SE2-210ENST00000506929 SCTRP47872 440 aa7.24□□□□□ -1.25
CDC42SE2-210ENST00000506929 EIF4G2P78344 907 aaKnown RBP eCLIP7.24□□□□□ -1.25
CDC42SE2-210ENST00000506929 CCDC116Q8IYX3 515 aa7.24□□□□□ -1.25
CDC42SE2-210ENST00000506929 BMP1P13497 986 aa7.23□□□□□ -1.25
CDC42SE2-210ENST00000506929 ADD1P35611 737 aaKnown RBP7.23□□□□□ -1.25
CDC42SE2-210ENST00000506929 SEMA3FQ13275 785 aa7.23□□□□□ -1.25
CDC42SE2-210ENST00000506929 ZNF784Q8NCA9 323 aaPredicted RBP7.23□□□□□ -1.25
CDC42SE2-210ENST00000506929 GLMNQ92990 594 aa7.23□□□□□ -1.25
CDC42SE2-210ENST00000506929 KIFC2Q96AC6 838 aa7.23□□□□□ -1.25
CDC42SE2-210ENST00000506929 UCN2Q96RP3 112 aa7.23□□□□□ -1.25
CDC42SE2-210ENST00000506929 LILRA1O75019 489 aa7.22□□□□□ -1.25
CDC42SE2-210ENST00000506929 NBPF20Q3BBV1 942 aa7.22□□□□□ -1.25
CDC42SE2-210ENST00000506929 TRIM46Q7Z4K8 759 aa7.22□□□□□ -1.25
CDC42SE2-210ENST00000506929 TRIM47Q96LD4 638 aa7.22□□□□□ -1.25
CDC42SE2-210ENST00000506929 C1orf115Q9H7X2 142 aa7.22□□□□□ -1.25
CDC42SE2-210ENST00000506929 CYLDQ9NQC7 956 aa7.22□□□□□ -1.25
CDC42SE2-210ENST00000506929 EMILIN1Q9Y6C2 1016 aa7.22□□□□□ -1.25
CDC42SE2-210ENST00000506929 SCARF1Q14162 830 aa7.21□□□□□ -1.26
CDC42SE2-210ENST00000506929 TBC1D9Q6ZT07 1266 aa7.21□□□□□ -1.26
CDC42SE2-210ENST00000506929 AGBL1Q96MI9 1066 aa7.21□□□□□ -1.26
CDC42SE2-210ENST00000506929 PCDHB11Q9Y5F2 797 aa7.21□□□□□ -1.26
CDC42SE2-210ENST00000506929 STAU1O95793 577 aaKnown RBP7.2□□□□□ -1.26
CDC42SE2-210ENST00000506929 SUPT5HO00267 1087 aaKnown RBP7.19□□□□□ -1.26
CDC42SE2-210ENST00000506929 SNRPBP14678 240 aaKnown RBP7.19□□□□□ -1.26
CDC42SE2-210ENST00000506929 DHX9Q08211 1270 aaKnown RBP7.19□□□□□ -1.26
CDC42SE2-210ENST00000506929 MRPL14Q6P1L8 145 aaKnown RBP7.19□□□□□ -1.26
CDC42SE2-210ENST00000506929 RNF135Q8IUD6 432 aa7.19□□□□□ -1.26
CDC42SE2-210ENST00000506929 WWC1Q8IX03 1113 aa7.19□□□□□ -1.26
CDC42SE2-210ENST00000506929 DEPDC4Q8N2C3 294 aa7.19□□□□□ -1.26
CDC42SE2-210ENST00000506929 KDF1Q8NAX2 398 aaPredicted RBP7.19□□□□□ -1.26
CDC42SE2-210ENST00000506929 ZNF775Q96BV0 537 aaPredicted RBP7.19□□□□□ -1.26
CDC42SE2-210ENST00000506929 PGPEP1Q9NXJ5 209 aa7.19□□□□□ -1.26
CDC42SE2-210ENST00000506929 SLFNL1Q499Z3 407 aa7.18□□□□□ -1.26
CDC42SE2-210ENST00000506929 ZNF592Q92610 1267 aa7.18□□□□□ -1.26
CDC42SE2-210ENST00000506929 CALR3Q96L12 384 aaKnown RBP7.18□□□□□ -1.26
CDC42SE2-210ENST00000506929 CHIC2Q9UKJ5 165 aa7.18□□□□□ -1.26
CDC42SE2-210ENST00000506929 SKIP12755 728 aa7.17□□□□□ -1.26
CDC42SE2-210ENST00000506929 MCCD1P59942 119 aaPredicted RBP7.17□□□□□ -1.26
CDC42SE2-210ENST00000506929 OXLD1Q5BKU9 147 aa7.17□□□□□ -1.26
CDC42SE2-210ENST00000506929 MEIOBQ8N635 442 aa7.17□□□□□ -1.26
CDC42SE2-210ENST00000506929 PLPP7Q8NBV4 271 aa7.17□□□□□ -1.26
CDC42SE2-210ENST00000506929 ZFP42Q96MM3 310 aa7.17□□□□□ -1.26
CDC42SE2-210ENST00000506929 UPP2O95045 317 aa7.16□□□□□ -1.26
CDC42SE2-210ENST00000506929 SOX11P35716 441 aa7.16□□□□□ -1.26
CDC42SE2-210ENST00000506929 C6orf118Q5T5N4 469 aa7.16□□□□□ -1.26
CDC42SE2-210ENST00000506929 SEPT12Q8IYM1 358 aa7.16□□□□□ -1.26
CDC42SE2-210ENST00000506929 OSBPL3Q9H4L5 887 aa7.16□□□□□ -1.26
CDC42SE2-210ENST00000506929 ZNF395Q9H8N7 513 aaPredicted RBP7.16□□□□□ -1.26
CDC42SE2-210ENST00000506929 TFIP11Q9UBB9 837 aaKnown RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms