RNA–Protein interactions for RNA: ENST00000506707.1

USP46-206, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-206ENST00000506707 TMC1Q8TDI8 760 aa7.97□□□□□ -1.13
USP46-206ENST00000506707 SBNO1A3KN83 1393 aa7.97□□□□□ -1.13
USP46-206ENST00000506707 JCADQ9P266 1359 aa7.97□□□□□ -1.13
USP46-206ENST00000506707 COL16A1Q07092 1604 aaPredicted RBP7.96□□□□□ -1.13
USP46-206ENST00000506707 CPSF1Q10570 1443 aaKnown RBP7.96□□□□□ -1.13
USP46-206ENST00000506707 PNPLA6Q8IY17 1366 aa7.96□□□□□ -1.14
USP46-206ENST00000506707 SSH2Q76I76 1423 aa7.95□□□□□ -1.14
USP46-206ENST00000506707 RGPD8O14715 1765 aaPredicted RBP7.95□□□□□ -1.14
USP46-206ENST00000506707 HS3ST6Q96QI5 342 aa7.95□□□□□ -1.14
USP46-206ENST00000506707 SPATA31A6Q5VVP1 1343 aa7.95□□□□□ -1.14
USP46-206ENST00000506707 NHSL1Q5SYE7 1610 aa7.95□□□□□ -1.14
USP46-206ENST00000506707 PHLPP1O60346 1717 aa7.95□□□□□ -1.14
USP46-206ENST00000506707 CD163L1Q9NR16 1453 aa7.94□□□□□ -1.14
USP46-206ENST00000506707 LMOD2Q6P5Q4 547 aa7.94□□□□□ -1.14
USP46-206ENST00000506707 HDGFL2Q7Z4V5 671 aaPredicted RBP7.94□□□□□ -1.14
USP46-206ENST00000506707 CABLES1Q8TDN4 633 aa7.94□□□□□ -1.14
USP46-206ENST00000506707 CARD14Q9BXL6 1004 aa7.94□□□□□ -1.14
USP46-206ENST00000506707 KRTAP3-3Q9BYR6 98 aa7.94□□□□□ -1.14
USP46-206ENST00000506707 KRTAP3-2Q9BYR7 98 aa7.94□□□□□ -1.14
USP46-206ENST00000506707 TERF2IPQ9NYB0 399 aa7.94□□□□□ -1.14
USP46-206ENST00000506707 KIF1AQ12756 1690 aa7.94□□□□□ -1.14
USP46-206ENST00000506707 KIF7Q2M1P5 1343 aa7.94□□□□□ -1.14
USP46-206ENST00000506707 TTC21BQ7Z4L5 1316 aa7.94□□□□□ -1.14
USP46-206ENST00000506707 BRD4O60885 1362 aaPredicted RBP7.94□□□□□ -1.14
USP46-206ENST00000506707 KTN1Q86UP2 1357 aaKnown RBP7.94□□□□□ -1.14
USP46-206ENST00000506707 NINLQ9Y2I6 1382 aa7.94□□□□□ -1.14
USP46-206ENST00000506707 USP6P35125 1406 aa7.94□□□□□ -1.14
USP46-206ENST00000506707 TOPAZ1Q8N9V7 1692 aa7.93□□□□□ -1.14
USP46-206ENST00000506707 NUTM2BA6NNL0 878 aaPredicted RBP7.93□□□□□ -1.14
USP46-206ENST00000506707 NUTM2EB1AL46 878 aaPredicted RBP7.93□□□□□ -1.14
USP46-206ENST00000506707 PYGBP11216 843 aa7.93□□□□□ -1.14
USP46-206ENST00000506707 NUTM2GQ5VZR2 741 aa7.93□□□□□ -1.14
USP46-206ENST00000506707 NUTM2AQ8IVF1 878 aaPredicted RBP7.93□□□□□ -1.14
USP46-206ENST00000506707 PDCD7Q8N8D1 485 aaKnown RBP7.93□□□□□ -1.14
USP46-206ENST00000506707 ABTB2Q8N961 1025 aa7.93□□□□□ -1.14
USP46-206ENST00000506707 L3MBTL3Q96JM7 780 aaPredicted RBP7.93□□□□□ -1.14
USP46-206ENST00000506707 POLR3GLQ9BT43 218 aa7.93□□□□□ -1.14
USP46-206ENST00000506707 A0A1W2PP64 1363 aa7.93□□□□□ -1.14
USP46-206ENST00000506707 TNS3Q68CZ2 1445 aa7.93□□□□□ -1.14
USP46-206ENST00000506707 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.92□□□□□ -1.14
USP46-206ENST00000506707 WASHC2AQ641Q2 1341 aa7.92□□□□□ -1.14
USP46-206ENST00000506707 ARHGEF10O15013 1369 aa7.92□□□□□ -1.14
USP46-206ENST00000506707 ANKRD36BQ8N2N9 1353 aa7.92□□□□□ -1.14
USP46-206ENST00000506707 FAM205CA6NFA0 338 aa7.91□□□□□ -1.14
USP46-206ENST00000506707 NLRP6P59044 892 aa7.91□□□□□ -1.14
USP46-206ENST00000506707 DCAF8Q5TAQ9 597 aa7.91□□□□□ -1.14
USP46-206ENST00000506707 NLRP13Q86W25 1043 aa7.91□□□□□ -1.14
USP46-206ENST00000506707 PANK3Q9H999 370 aa7.91□□□□□ -1.14
USP46-206ENST00000506707 TTC21AQ8NDW8 1320 aa7.91□□□□□ -1.14
USP46-206ENST00000506707 LRP6O75581 1613 aa7.9□□□□□ -1.14
USP46-206ENST00000506707 EDC4Q6P2E9 1401 aaKnown RBP7.9□□□□□ -1.14
USP46-206ENST00000506707 CCDC7Q96M83 1385 aa7.9□□□□□ -1.14
USP46-206ENST00000506707 FAM83GA6ND36 823 aa7.9□□□□□ -1.14
USP46-206ENST00000506707 FYB1O15117 783 aa7.9□□□□□ -1.14
USP46-206ENST00000506707 ADAMTS2O95450 1211 aa7.9□□□□□ -1.14
USP46-206ENST00000506707 GCP02774 474 aa7.9□□□□□ -1.14
USP46-206ENST00000506707 NME9Q86XW9 330 aa7.9□□□□□ -1.14
USP46-206ENST00000506707 RGS17Q9UGC6 210 aaPredicted RBP7.9□□□□□ -1.14
USP46-206ENST00000506707 PCDHB8Q9UN66 801 aa7.9□□□□□ -1.14
USP46-206ENST00000506707 ITSN1Q15811 1721 aa7.89□□□□□ -1.15
USP46-206ENST00000506707 TRPM3Q9HCF6 1732 aaPredicted RBP7.89□□□□□ -1.15
USP46-206ENST00000506707 USP31Q70CQ4 1352 aa7.89□□□□□ -1.15
USP46-206ENST00000506707 USP19O94966 1318 aa7.89□□□□□ -1.15
USP46-206ENST00000506707 PER1O15534 1290 aaPredicted RBP7.89□□□□□ -1.15
USP46-206ENST00000506707 GOLGA2Q08379 1002 aa7.89□□□□□ -1.15
USP46-206ENST00000506707 MKRN3Q13064 507 aaKnown RBP7.89□□□□□ -1.15
USP46-206ENST00000506707 SHPRHQ149N8 1683 aa7.89□□□□□ -1.15
USP46-206ENST00000506707 POTEB3A0JP26 581 aa7.88□□□□□ -1.15
USP46-206ENST00000506707 HAP1P54257 671 aaPredicted RBP7.88□□□□□ -1.15
USP46-206ENST00000506707 ZC3H6P61129 1189 aaKnown RBP7.88□□□□□ -1.15
USP46-206ENST00000506707 MEX3CQ5U5Q3 659 aaKnown RBP7.88□□□□□ -1.15
USP46-206ENST00000506707 POTEBQ6S5H4 581 aa7.88□□□□□ -1.15
USP46-206ENST00000506707 FNBP4Q8N3X1 1017 aaPredicted RBP7.88□□□□□ -1.15
USP46-206ENST00000506707 NGLY1Q96IV0 654 aa7.88□□□□□ -1.15
USP46-206ENST00000506707 C8orf37Q96NL8 207 aa7.88□□□□□ -1.15
USP46-206ENST00000506707 COL22A1Q8NFW1 1626 aaPredicted RBP7.88□□□□□ -1.15
USP46-206ENST00000506707 ALS2Q96Q42 1657 aa7.87□□□□□ -1.15
USP46-206ENST00000506707 FBLN1P23142 703 aa7.87□□□□□ -1.15
USP46-206ENST00000506707 ZNF467Q7Z7K2 595 aaPredicted RBP7.87□□□□□ -1.15
USP46-206ENST00000506707 GGNBP2Q9H3C7 697 aa7.87□□□□□ -1.15
USP46-206ENST00000506707 MED1Q15648 1581 aaPredicted RBP7.87□□□□□ -1.15
USP46-206ENST00000506707 NSD3Q9BZ95 1437 aa7.86□□□□□ -1.15
USP46-206ENST00000506707 CHRNA2Q15822 529 aa7.86□□□□□ -1.15
USP46-206ENST00000506707 ARHGEF25Q86VW2 580 aa7.86□□□□□ -1.15
USP46-206ENST00000506707 KCNH5Q8NCM2 988 aa7.86□□□□□ -1.15
USP46-206ENST00000506707 COG3Q96JB2 828 aa7.86□□□□□ -1.15
USP46-206ENST00000506707 KIAA0232Q92628 1395 aa7.85□□□□□ -1.15
USP46-206ENST00000506707 AFF2P51816 1311 aa7.85□□□□□ -1.15
USP46-206ENST00000506707 CGNL1Q0VF96 1302 aa7.85□□□□□ -1.15
USP46-206ENST00000506707 AKAP12Q02952 1782 aa7.85□□□□□ -1.15
USP46-206ENST00000506707 SOX12O15370 315 aa7.85□□□□□ -1.15
USP46-206ENST00000506707 AMER1Q5JTC6 1135 aaPredicted RBP7.85□□□□□ -1.15
USP46-206ENST00000506707 POTEAQ6S8J7 498 aa7.85□□□□□ -1.15
USP46-206ENST00000506707 PRDM11Q9NQV5 511 aa7.85□□□□□ -1.15
USP46-206ENST00000506707 KNSTRNQ9Y448 316 aa7.85□□□□□ -1.15
USP46-206ENST00000506707 MYOM1P52179 1685 aa7.85□□□□□ -1.15
USP46-206ENST00000506707 OVOS2A0A0J9YW53 1432 aa7.85□□□□□ -1.15
USP46-206ENST00000506707 OVOS2Q6IE36 1432 aa7.85□□□□□ -1.15
USP46-206ENST00000506707 CPDO75976 1380 aa7.84□□□□□ -1.15
USP46-206ENST00000506707 NRKQ7Z2Y5 1582 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms