RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 KCTD15Q96SI1 283 aaPredicted RBP5.96□□□□□ -1.46
GYPB-207ENST00000506679 CHIC2Q9UKJ5 165 aa5.96□□□□□ -1.46
GYPB-207ENST00000506679 PDZRN3Q9UPQ7 1066 aa5.96□□□□□ -1.46
GYPB-207ENST00000506679 J3QL48 77 aa5.95□□□□□ -1.46
GYPB-207ENST00000506679 NR3C2P08235 984 aa5.95□□□□□ -1.46
GYPB-207ENST00000506679 SEMA3FQ13275 785 aa5.95□□□□□ -1.46
GYPB-207ENST00000506679 HDGFL1Q5TGJ6 251 aa5.95□□□□□ -1.46
GYPB-207ENST00000506679 VASH1Q7L8A9 365 aaPredicted RBP5.95□□□□□ -1.46
GYPB-207ENST00000506679 CYP4X1Q8N118 509 aa5.95□□□□□ -1.46
GYPB-207ENST00000506679 UCN2Q96RP3 112 aa5.95□□□□□ -1.46
GYPB-207ENST00000506679 C1orf115Q9H7X2 142 aa5.95□□□□□ -1.46
GYPB-207ENST00000506679 ZNF777Q9ULD5 760 aaPredicted RBP5.95□□□□□ -1.46
GYPB-207ENST00000506679 NRG2O14511 850 aaPredicted RBP5.94□□□□□ -1.46
GYPB-207ENST00000506679 GIGYF1O75420 1035 aaPredicted RBP5.94□□□□□ -1.46
GYPB-207ENST00000506679 ALDH1A1P00352 501 aa5.94□□□□□ -1.46
GYPB-207ENST00000506679 FSHRP23945 695 aa5.94□□□□□ -1.46
GYPB-207ENST00000506679 NR5A1Q13285 461 aa5.94□□□□□ -1.46
GYPB-207ENST00000506679 INTS6LQ5JSJ4 861 aaKnown RBP5.94□□□□□ -1.46
GYPB-207ENST00000506679 TTC24A2A3L6 582 aaPredicted RBP5.93□□□□□ -1.46
GYPB-207ENST00000506679 AVPP01185 164 aa5.93□□□□□ -1.46
GYPB-207ENST00000506679 ARID5BQ14865 1188 aa5.93□□□□□ -1.46
GYPB-207ENST00000506679 CCDC125Q86Z20 511 aa5.93□□□□□ -1.46
GYPB-207ENST00000506679 NFATC2IPQ8NCF5 419 aa5.93□□□□□ -1.46
GYPB-207ENST00000506679 KLF16Q9BXK1 252 aaPredicted RBP5.93□□□□□ -1.46
GYPB-207ENST00000506679 NNTQ13423 1086 aa5.92□□□□□ -1.46
GYPB-207ENST00000506679 LAPTM4AQ15012 233 aa5.92□□□□□ -1.46
GYPB-207ENST00000506679 RNF20Q5VTR2 975 aa5.92□□□□□ -1.46
GYPB-207ENST00000506679 CCDC116Q8IYX3 515 aa5.92□□□□□ -1.46
GYPB-207ENST00000506679 CALR3Q96L12 384 aaKnown RBP5.92□□□□□ -1.46
GYPB-207ENST00000506679 ARID3CA6NKF2 412 aa5.91□□□□□ -1.46
GYPB-207ENST00000506679 ERVH48-1M5A8F1 160 aa5.91□□□□□ -1.46
GYPB-207ENST00000506679 PIK3CDO00329 1044 aa5.91□□□□□ -1.46
GYPB-207ENST00000506679 GFRA3O60609 400 aa5.91□□□□□ -1.46
GYPB-207ENST00000506679 TRAF7Q6Q0C0 670 aa5.91□□□□□ -1.46
GYPB-207ENST00000506679 CCDC85AQ96PX6 553 aaPredicted RBP5.91□□□□□ -1.46
GYPB-207ENST00000506679 WASF2Q9Y6W5 498 aa5.91□□□□□ -1.46
GYPB-207ENST00000506679 DGAT1O75907 488 aa5.9□□□□□ -1.46
GYPB-207ENST00000506679 DHX9Q08211 1270 aaKnown RBP5.9□□□□□ -1.46
GYPB-207ENST00000506679 SLFNL1Q499Z3 407 aa5.9□□□□□ -1.46
GYPB-207ENST00000506679 PPP1R26Q5T8A7 1209 aaPredicted RBP5.9□□□□□ -1.46
GYPB-207ENST00000506679 RNF135Q8IUD6 432 aa5.9□□□□□ -1.46
GYPB-207ENST00000506679 HPS1Q92902 700 aa5.9□□□□□ -1.46
GYPB-207ENST00000506679 FAM187AA6NFU0 413 aa5.89□□□□□ -1.47
GYPB-207ENST00000506679 ATP9BO43861 1147 aa5.89□□□□□ -1.47
GYPB-207ENST00000506679 TIMP2P16035 220 aa5.89□□□□□ -1.47
GYPB-207ENST00000506679 MAP7D1Q3KQU3 841 aa5.89□□□□□ -1.47
GYPB-207ENST00000506679 TSGA10IPQ3SY00 556 aa5.89□□□□□ -1.47
GYPB-207ENST00000506679 TBC1D9Q6ZT07 1266 aa5.89□□□□□ -1.47
GYPB-207ENST00000506679 CRIPAKQ8N1N5 446 aa5.89□□□□□ -1.47
GYPB-207ENST00000506679 IRX2Q9BZI1 471 aaPredicted RBP5.89□□□□□ -1.47
GYPB-207ENST00000506679 PPP1R12CQ9BZL4 782 aa5.89□□□□□ -1.47
GYPB-207ENST00000506679 PALM3A6NDB9 673 aaPredicted RBP5.88□□□□□ -1.47
GYPB-207ENST00000506679 SUPT5HO00267 1087 aaKnown RBP5.88□□□□□ -1.47
GYPB-207ENST00000506679 LILRA1O75019 489 aa5.88□□□□□ -1.47
GYPB-207ENST00000506679 SMCPP49901 116 aaPredicted RBP5.88□□□□□ -1.47
GYPB-207ENST00000506679 ERVK-9P63128 1117 aa5.88□□□□□ -1.47
GYPB-207ENST00000506679 CFAP70Q5T0N1 1121 aa5.88□□□□□ -1.47
GYPB-207ENST00000506679 PLEKHM2Q8IWE5 1019 aa5.88□□□□□ -1.47
GYPB-207ENST00000506679 PLPP7Q8NBV4 271 aa5.88□□□□□ -1.47
GYPB-207ENST00000506679 ZNF784Q8NCA9 323 aaPredicted RBP5.88□□□□□ -1.47
GYPB-207ENST00000506679 CDCA7Q9BWT1 371 aaPredicted RBP5.88□□□□□ -1.47
GYPB-207ENST00000506679 TMPRSS4Q9NRS4 437 aa5.88□□□□□ -1.47
GYPB-207ENST00000506679 EMILIN1Q9Y6C2 1016 aa5.88□□□□□ -1.47
GYPB-207ENST00000506679 Q6ZVU0 165 aa5.87□□□□□ -1.47
GYPB-207ENST00000506679 CCDC82Q8N4S0 544 aa5.87□□□□□ -1.47
GYPB-207ENST00000506679 ITPKCQ96DU7 683 aa5.87□□□□□ -1.47
GYPB-207ENST00000506679 TFIP11Q9UBB9 837 aaKnown RBP5.87□□□□□ -1.47
GYPB-207ENST00000506679 SERPINA10Q9UK55 444 aa5.87□□□□□ -1.47
GYPB-207ENST00000506679 DOLKQ9UPQ8 538 aa5.87□□□□□ -1.47
GYPB-207ENST00000506679 PCDHB11Q9Y5F2 797 aa5.87□□□□□ -1.47
GYPB-207ENST00000506679 MAFBQ9Y5Q3 323 aaPredicted RBP5.87□□□□□ -1.47
GYPB-207ENST00000506679 USP17L5A8MUK1 530 aa5.86□□□□□ -1.47
GYPB-207ENST00000506679 LZTS3O60299 673 aaPredicted RBP5.86□□□□□ -1.47
GYPB-207ENST00000506679 ZIC2O95409 532 aaPredicted RBP5.86□□□□□ -1.47
GYPB-207ENST00000506679 SKIP12755 728 aa5.86□□□□□ -1.47
GYPB-207ENST00000506679 SCTRP47872 440 aa5.86□□□□□ -1.47
GYPB-207ENST00000506679 WDR4P57081 412 aaKnown RBP5.86□□□□□ -1.47
GYPB-207ENST00000506679 RAB15P59190 212 aa5.86□□□□□ -1.47
GYPB-207ENST00000506679 CTC1Q2NKJ3 1217 aa5.86□□□□□ -1.47
GYPB-207ENST00000506679 PKDCCQ504Y2 493 aa5.86□□□□□ -1.47
GYPB-207ENST00000506679 ZFAND3Q9H8U3 227 aa5.86□□□□□ -1.47
GYPB-207ENST00000506679 PGPEP1Q9NXJ5 209 aa5.86□□□□□ -1.47
GYPB-207ENST00000506679 USP17L3A6NCW0 530 aa5.85□□□□□ -1.47
GYPB-207ENST00000506679 USP17L4A6NCW7 530 aa5.85□□□□□ -1.47
GYPB-207ENST00000506679 LCE2BO14633 110 aa5.85□□□□□ -1.47
GYPB-207ENST00000506679 MYT1Q01538 1121 aa5.85□□□□□ -1.47
GYPB-207ENST00000506679 CC2D2BQ6DHV5 1058 aa5.85□□□□□ -1.47
GYPB-207ENST00000506679 USP17L2Q6R6M4 530 aa5.85□□□□□ -1.47
GYPB-207ENST00000506679 USP17L1Q7RTZ2 530 aa5.85□□□□□ -1.47
GYPB-207ENST00000506679 ADD1P35611 737 aaKnown RBP5.84□□□□□ -1.47
GYPB-207ENST00000506679 SRPK2P78362 688 aaKnown RBP5.84□□□□□ -1.47
GYPB-207ENST00000506679 NCOA4Q13772 614 aa5.84□□□□□ -1.47
GYPB-207ENST00000506679 MEIOBQ8N635 442 aa5.84□□□□□ -1.47
GYPB-207ENST00000506679 KDF1Q8NAX2 398 aaPredicted RBP5.84□□□□□ -1.47
GYPB-207ENST00000506679 TRIM52Q96A61 297 aa5.84□□□□□ -1.47
GYPB-207ENST00000506679 CCDC97Q96F63 343 aaPredicted RBP5.84□□□□□ -1.47
GYPB-207ENST00000506679 OSBPL3Q9H4L5 887 aa5.84□□□□□ -1.47
GYPB-207ENST00000506679 CYLDQ9NQC7 956 aa5.84□□□□□ -1.47
GYPB-207ENST00000506679 CAPN5O15484 640 aaPredicted RBP5.83□□□□□ -1.48
GYPB-207ENST00000506679 USP4Q13107 963 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms