RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 CPSF1Q10570 1443 aaKnown RBP10.07□□□□□ -0.8
GYPB-206ENST00000506516 RXRBP28702 533 aa10.07□□□□□ -0.8
GYPB-206ENST00000506516 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.07□□□□□ -0.8
GYPB-206ENST00000506516 TRPC5Q9UL62 973 aaPredicted RBP10.07□□□□□ -0.8
GYPB-206ENST00000506516 FAM83GA6ND36 823 aa10.06□□□□□ -0.8
GYPB-206ENST00000506516 GCP02774 474 aa10.06□□□□□ -0.8
GYPB-206ENST00000506516 ZC3H6P61129 1189 aaKnown RBP10.06□□□□□ -0.8
GYPB-206ENST00000506516 ILDR2Q71H61 639 aa10.06□□□□□ -0.8
GYPB-206ENST00000506516 KCNH5Q8NCM2 988 aa10.06□□□□□ -0.8
GYPB-206ENST00000506516 TRPM3Q9HCF6 1732 aaPredicted RBP10.06□□□□□ -0.8
GYPB-206ENST00000506516 SSH2Q76I76 1423 aa10.06□□□□□ -0.8
GYPB-206ENST00000506516 CD44P16070 742 aaKnown RBP10.05□□□□□ -0.8
GYPB-206ENST00000506516 RBM6P78332 1123 aaKnown RBP10.05□□□□□ -0.8
GYPB-206ENST00000506516 UNC5CLQ8IV45 518 aa10.05□□□□□ -0.8
GYPB-206ENST00000506516 PRDM11Q9NQV5 511 aa10.05□□□□□ -0.8
GYPB-206ENST00000506516 A0A1W2PP64 1363 aa10.04□□□□□ -0.8
GYPB-206ENST00000506516 ANKRD36BQ8N2N9 1353 aa10.04□□□□□ -0.8
GYPB-206ENST00000506516 ALS2Q96Q42 1657 aa10.04□□□□□ -0.8
GYPB-206ENST00000506516 BTG4Q9NY30 223 aa10.04□□□□□ -0.8
GYPB-206ENST00000506516 EDC4Q6P2E9 1401 aaKnown RBP10.04□□□□□ -0.8
GYPB-206ENST00000506516 USP19O94966 1318 aa10.04□□□□□ -0.8
GYPB-206ENST00000506516 EVA1CP58658 441 aa10.03□□□□□ -0.8
GYPB-206ENST00000506516 CCDC9Q9Y3X0 531 aaKnown RBP10.03□□□□□ -0.8
GYPB-206ENST00000506516 CD163L1Q9NR16 1453 aa10.03□□□□□ -0.8
GYPB-206ENST00000506516 KIAA0232Q92628 1395 aa10.02□□□□□ -0.8
GYPB-206ENST00000506516 ZBTB7CA1YPR0 619 aa10.02□□□□□ -0.81
GYPB-206ENST00000506516 CHRNA2Q15822 529 aa10.02□□□□□ -0.81
GYPB-206ENST00000506516 NME9Q86XW9 330 aa10.02□□□□□ -0.81
GYPB-206ENST00000506516 COG3Q96JB2 828 aa10.02□□□□□ -0.81
GYPB-206ENST00000506516 GJD4Q96KN9 370 aaPredicted RBP10.02□□□□□ -0.81
GYPB-206ENST00000506516 BCL9LQ86UU0 1499 aa10.02□□□□□ -0.81
GYPB-206ENST00000506516 USP31Q70CQ4 1352 aa10.01□□□□□ -0.81
GYPB-206ENST00000506516 SOX12O15370 315 aa10.01□□□□□ -0.81
GYPB-206ENST00000506516 ZEB1P37275 1124 aaPredicted RBP10.01□□□□□ -0.81
GYPB-206ENST00000506516 PLCB2Q00722 1185 aa10.01□□□□□ -0.81
GYPB-206ENST00000506516 VPS72Q15906 364 aa10.01□□□□□ -0.81
GYPB-206ENST00000506516 ZRANB1Q9UGI0 708 aa10.01□□□□□ -0.81
GYPB-206ENST00000506516 SLIT2O94813 1529 aa10.01□□□□□ -0.81
GYPB-206ENST00000506516 CPDO75976 1380 aa10.01□□□□□ -0.81
GYPB-206ENST00000506516 C11orf95C9JLR9 678 aaPredicted RBP10□□□□□ -0.81
GYPB-206ENST00000506516 RNF25Q96BH1 459 aaPredicted RBP10□□□□□ -0.81
GYPB-206ENST00000506516 PANK3Q9H999 370 aa10□□□□□ -0.81
GYPB-206ENST00000506516 AKAP12Q02952 1782 aa9.99□□□□□ -0.81
GYPB-206ENST00000506516 FYB1O15117 783 aa9.99□□□□□ -0.81
GYPB-206ENST00000506516 ARHGEF25Q86VW2 580 aa9.99□□□□□ -0.81
GYPB-206ENST00000506516 CARD14Q9BXL6 1004 aa9.99□□□□□ -0.81
GYPB-206ENST00000506516 STRN4Q9NRL3 753 aa9.99□□□□□ -0.81
GYPB-206ENST00000506516 ATRNO75882 1429 aa9.99□□□□□ -0.81
GYPB-206ENST00000506516 SOCS7O14512 581 aa9.98□□□□□ -0.81
GYPB-206ENST00000506516 GABBR2O75899 941 aa9.98□□□□□ -0.81
GYPB-206ENST00000506516 CHRM1P11229 460 aaPredicted RBP9.98□□□□□ -0.81
GYPB-206ENST00000506516 TSPYL2Q9H2G4 693 aaPredicted RBP9.98□□□□□ -0.81
GYPB-206ENST00000506516 GGNBP2Q9H3C7 697 aa9.98□□□□□ -0.81
GYPB-206ENST00000506516 CGNL1Q0VF96 1302 aa9.98□□□□□ -0.81
GYPB-206ENST00000506516 MARF1Q9Y4F3 1742 aaKnown RBP9.98□□□□□ -0.81
GYPB-206ENST00000506516 AATKQ6ZMQ8 1374 aa9.98□□□□□ -0.81
GYPB-206ENST00000506516 MON2Q7Z3U7 1717 aa9.97□□□□□ -0.81
GYPB-206ENST00000506516 COL14A1Q05707 1796 aaKnown RBP9.97□□□□□ -0.81
GYPB-206ENST00000506516 RIOK3O14730 519 aaKnown RBP9.97□□□□□ -0.81
GYPB-206ENST00000506516 PYGBP11216 843 aa9.97□□□□□ -0.81
GYPB-206ENST00000506516 BBXQ8WY36 941 aaPredicted RBP9.97□□□□□ -0.81
GYPB-206ENST00000506516 KIF7Q2M1P5 1343 aa9.97□□□□□ -0.81
GYPB-206ENST00000506516 SLIT3O75094 1523 aa9.97□□□□□ -0.81
GYPB-206ENST00000506516 PIK3C2AO00443 1686 aa9.96□□□□□ -0.81
GYPB-206ENST00000506516 ONECUT3O60422 494 aaPredicted RBP9.96□□□□□ -0.82
GYPB-206ENST00000506516 KNSTRNQ9Y448 316 aa9.96□□□□□ -0.82
GYPB-206ENST00000506516 NSD3Q9BZ95 1437 aa9.96□□□□□ -0.82
GYPB-206ENST00000506516 CDK12Q9NYV4 1490 aaPredicted RBP9.96□□□□□ -0.82
GYPB-206ENST00000506516 NRKQ7Z2Y5 1582 aa9.96□□□□□ -0.82
GYPB-206ENST00000506516 PHRF1Q9P1Y6 1649 aaKnown RBP9.96□□□□□ -0.82
GYPB-206ENST00000506516 ABCA3Q99758 1704 aa9.96□□□□□ -0.82
GYPB-206ENST00000506516 A0A0G2JS52 829 aa9.95□□□□□ -0.82
GYPB-206ENST00000506516 CSB-PGBD3P0DP91 1061 aa9.95□□□□□ -0.82
GYPB-206ENST00000506516 MYT1Q01538 1121 aa9.95□□□□□ -0.82
GYPB-206ENST00000506516 LARP1Q6PKG0 1096 aaKnown RBP9.95□□□□□ -0.82
GYPB-206ENST00000506516 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.95□□□□□ -0.82
GYPB-206ENST00000506516 USP35Q9P2H5 1018 aa9.95□□□□□ -0.82
GYPB-206ENST00000506516 TAOK2Q9UL54 1235 aa9.95□□□□□ -0.82
GYPB-206ENST00000506516 AXIN2Q9Y2T1 843 aa9.95□□□□□ -0.82
GYPB-206ENST00000506516 THRAP3Q9Y2W1 955 aaKnown RBP9.95□□□□□ -0.82
GYPB-206ENST00000506516 SPATA31A5Q5VU36 1347 aa9.95□□□□□ -0.82
GYPB-206ENST00000506516 SPATA31A7Q8IWB4 1347 aa9.95□□□□□ -0.82
GYPB-206ENST00000506516 NWD2Q9ULI1 1742 aa9.94□□□□□ -0.82
GYPB-206ENST00000506516 CRYBG1Q9Y4K1 1723 aa9.94□□□□□ -0.82
GYPB-206ENST00000506516 OVOS2A0A0J9YW53 1432 aa9.94□□□□□ -0.82
GYPB-206ENST00000506516 OVOS2Q6IE36 1432 aa9.94□□□□□ -0.82
GYPB-206ENST00000506516 SPATA31A1Q5TZJ5 1347 aa9.94□□□□□ -0.82
GYPB-206ENST00000506516 AMPHP49418 695 aa9.94□□□□□ -0.82
GYPB-206ENST00000506516 FAM98CQ17RN3 349 aaKnown RBP9.94□□□□□ -0.82
GYPB-206ENST00000506516 TOM1L2Q6ZVM7 507 aa9.94□□□□□ -0.82
GYPB-206ENST00000506516 SEPT12Q8IYM1 358 aa9.94□□□□□ -0.82
GYPB-206ENST00000506516 IP6K1Q92551 441 aa9.94□□□□□ -0.82
GYPB-206ENST00000506516 CCDC7Q96M83 1385 aa9.93□□□□□ -0.82
GYPB-206ENST00000506516 WASHC2AQ641Q2 1341 aa9.93□□□□□ -0.82
GYPB-206ENST00000506516 CLCN6P51797 869 aa9.93□□□□□ -0.82
GYPB-206ENST00000506516 TCP11L2Q8N4U5 519 aa9.93□□□□□ -0.82
GYPB-206ENST00000506516 ZNF579Q8NAF0 562 aaKnown RBP9.93□□□□□ -0.82
GYPB-206ENST00000506516 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.93□□□□□ -0.82
GYPB-206ENST00000506516 CAMTA1Q9Y6Y1 1673 aa9.93□□□□□ -0.82
GYPB-206ENST00000506516 WDR17Q8IZU2 1322 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms