RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 DPYSL4O14531 572 aa8.15□□□□□ -1.1
SCLT1-207ENST00000506233 MYT1Q01538 1121 aa8.15□□□□□ -1.11
SCLT1-207ENST00000506233 BRD4O60885 1362 aaPredicted RBP8.15□□□□□ -1.11
SCLT1-207ENST00000506233 CPSF1Q10570 1443 aaKnown RBP8.15□□□□□ -1.11
SCLT1-207ENST00000506233 ITSN1Q15811 1721 aa8.14□□□□□ -1.11
SCLT1-207ENST00000506233 MAP2K5Q13163 448 aa8.14□□□□□ -1.11
SCLT1-207ENST00000506233 ATP7BP35670 1465 aa8.14□□□□□ -1.11
SCLT1-207ENST00000506233 KTN1Q86UP2 1357 aaKnown RBP8.14□□□□□ -1.11
SCLT1-207ENST00000506233 ZBED9Q6R2W3 1325 aa8.14□□□□□ -1.11
SCLT1-207ENST00000506233 GIGYF2Q6Y7W6 1299 aaKnown RBP8.14□□□□□ -1.11
SCLT1-207ENST00000506233 FAM177A1Q8N128 213 aaPredicted RBP8.13□□□□□ -1.11
SCLT1-207ENST00000506233 NWD1Q149M9 1564 aa8.13□□□□□ -1.11
SCLT1-207ENST00000506233 VIRMAQ69YN4 1812 aaKnown RBP8.13□□□□□ -1.11
SCLT1-207ENST00000506233 TTLL12Q14166 644 aaPredicted RBP8.13□□□□□ -1.11
SCLT1-207ENST00000506233 TRMT2AQ8IZ69 625 aaKnown RBP8.13□□□□□ -1.11
SCLT1-207ENST00000506233 PROCA1Q8NCQ7 364 aaPredicted RBP8.13□□□□□ -1.11
SCLT1-207ENST00000506233 TRPM3Q9HCF6 1732 aaPredicted RBP8.13□□□□□ -1.11
SCLT1-207ENST00000506233 ZMYM3Q14202 1370 aa8.13□□□□□ -1.11
SCLT1-207ENST00000506233 MINK1Q8N4C8 1332 aaPredicted RBP8.13□□□□□ -1.11
SCLT1-207ENST00000506233 PANK3Q9H999 370 aa8.12□□□□□ -1.11
SCLT1-207ENST00000506233 PHRF1Q9P1Y6 1649 aaKnown RBP8.12□□□□□ -1.11
SCLT1-207ENST00000506233 CEP170BQ9Y4F5 1589 aaPredicted RBP8.12□□□□□ -1.11
SCLT1-207ENST00000506233 PSEN1P49768 467 aa8.11□□□□□ -1.11
SCLT1-207ENST00000506233 TMEM132EQ6IEE7 984 aa8.11□□□□□ -1.11
SCLT1-207ENST00000506233 STAC3Q96MF2 364 aa8.1□□□□□ -1.11
SCLT1-207ENST00000506233 STRCQ7RTU9 1775 aa8.1□□□□□ -1.11
SCLT1-207ENST00000506233 KANK1Q14678 1352 aa8.1□□□□□ -1.11
SCLT1-207ENST00000506233 RPGRIP1LQ68CZ1 1315 aa8.1□□□□□ -1.11
SCLT1-207ENST00000506233 CAMTA1Q9Y6Y1 1673 aa8.1□□□□□ -1.11
SCLT1-207ENST00000506233 LRRC37A3O60309 1634 aa8.1□□□□□ -1.11
SCLT1-207ENST00000506233 SNRKQ9NRH2 765 aa8.1□□□□□ -1.11
SCLT1-207ENST00000506233 MYBBP1AQ9BQG0 1328 aaKnown RBP8.1□□□□□ -1.11
SCLT1-207ENST00000506233 PDE4AP27815 886 aa8.1□□□□□ -1.11
SCLT1-207ENST00000506233 CABP2Q9NPB3 220 aa8.1□□□□□ -1.11
SCLT1-207ENST00000506233 PNPLA6Q8IY17 1366 aa8.1□□□□□ -1.11
SCLT1-207ENST00000506233 WASHC2CQ9Y4E1 1318 aa8.1□□□□□ -1.11
SCLT1-207ENST00000506233 PCMTD1Q96MG8 357 aaPredicted RBP8.09□□□□□ -1.11
SCLT1-207ENST00000506233 ZNF467Q7Z7K2 595 aaPredicted RBP8.09□□□□□ -1.11
SCLT1-207ENST00000506233 A0A1W2PP64 1363 aa8.09□□□□□ -1.11
SCLT1-207ENST00000506233 ABCC11Q96J66 1382 aa8.09□□□□□ -1.11
SCLT1-207ENST00000506233 POM121CA8CG34 1229 aa8.09□□□□□ -1.11
SCLT1-207ENST00000506233 ZNF326Q5BKZ1 582 aaKnown RBP8.09□□□□□ -1.11
SCLT1-207ENST00000506233 IGSF5Q9NSI5 407 aa8.09□□□□□ -1.11
SCLT1-207ENST00000506233 RGPD2P0DJD1 1756 aa8.09□□□□□ -1.11
SCLT1-207ENST00000506233 GGT6Q6P531 493 aa8.08□□□□□ -1.12
SCLT1-207ENST00000506233 RIMS2Q9UQ26 1411 aa8.08□□□□□ -1.12
SCLT1-207ENST00000506233 DIP2AQ14689 1571 aa8.08□□□□□ -1.12
SCLT1-207ENST00000506233 ROBO2Q9HCK4 1378 aa8.08□□□□□ -1.12
SCLT1-207ENST00000506233 ANP32CO43423 234 aa8.08□□□□□ -1.12
SCLT1-207ENST00000506233 DHX37Q8IY37 1157 aaKnown RBP8.08□□□□□ -1.12
SCLT1-207ENST00000506233 LMO7Q8WWI1 1683 aa8.08□□□□□ -1.12
SCLT1-207ENST00000506233 ZNF330Q9Y3S2 320 aaPredicted RBP8.07□□□□□ -1.12
SCLT1-207ENST00000506233 PPP2R1AP30153 589 aa8.07□□□□□ -1.12
SCLT1-207ENST00000506233 PDIA6Q15084 440 aa8.07□□□□□ -1.12
SCLT1-207ENST00000506233 TSPYL2Q9H2G4 693 aaPredicted RBP8.07□□□□□ -1.12
SCLT1-207ENST00000506233 LTKP29376 864 aa8.06□□□□□ -1.12
SCLT1-207ENST00000506233 LRRC7Q96NW7 1537 aa8.06□□□□□ -1.12
SCLT1-207ENST00000506233 NUTM2DQ5VT03 806 aaPredicted RBP8.06□□□□□ -1.12
SCLT1-207ENST00000506233 TUBGCP6Q96RT7 1819 aa8.06□□□□□ -1.12
SCLT1-207ENST00000506233 PRR36Q9H6K5 1346 aa8.06□□□□□ -1.12
SCLT1-207ENST00000506233 N4BP2Q86UW6 1770 aaPredicted RBP8.06□□□□□ -1.12
SCLT1-207ENST00000506233 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.06□□□□□ -1.12
SCLT1-207ENST00000506233 FAM135BQ49AJ0 1406 aa8.06□□□□□ -1.12
SCLT1-207ENST00000506233 NLRP6P59044 892 aa8.05□□□□□ -1.12
SCLT1-207ENST00000506233 SH3D19Q5HYK7 790 aa8.05□□□□□ -1.12
SCLT1-207ENST00000506233 TMEM2Q9UHN6 1383 aa8.05□□□□□ -1.12
SCLT1-207ENST00000506233 ADAMTS7Q9UKP4 1686 aa8.05□□□□□ -1.12
SCLT1-207ENST00000506233 SIPA1L3O60292 1781 aaPredicted RBP8.05□□□□□ -1.12
SCLT1-207ENST00000506233 ANKRD36BQ8N2N9 1353 aa8.05□□□□□ -1.12
SCLT1-207ENST00000506233 ALS2Q96Q42 1657 aa8.05□□□□□ -1.12
SCLT1-207ENST00000506233 NSD3Q9BZ95 1437 aa8.05□□□□□ -1.12
SCLT1-207ENST00000506233 POLR3AO14802 1390 aaPredicted RBP8.05□□□□□ -1.12
SCLT1-207ENST00000506233 NUTM2FA1L443 756 aa8.04□□□□□ -1.12
SCLT1-207ENST00000506233 HMGB1P09429 215 aaKnown RBP8.04□□□□□ -1.12
SCLT1-207ENST00000506233 PLEKHF1Q96S99 279 aa8.04□□□□□ -1.12
SCLT1-207ENST00000506233 PHOX2BQ99453 314 aa8.04□□□□□ -1.12
SCLT1-207ENST00000506233 LTN1O94822 1766 aa8.04□□□□□ -1.12
SCLT1-207ENST00000506233 CDCA7LQ96GN5 454 aa8.04□□□□□ -1.12
SCLT1-207ENST00000506233 COL18A1P39060 1754 aa8.04□□□□□ -1.12
SCLT1-207ENST00000506233 GLI3P10071 1580 aa8.04□□□□□ -1.12
SCLT1-207ENST00000506233 PRIM1P49642 420 aaKnown RBP8.04□□□□□ -1.12
SCLT1-207ENST00000506233 SLC12A5Q9H2X9 1139 aa8.04□□□□□ -1.12
SCLT1-207ENST00000506233 SLC52A1Q9NWF4 448 aa8.04□□□□□ -1.12
SCLT1-207ENST00000506233 SENP3-EIF4A1A0A087X0R7 540 aa8.03□□□□□ -1.12
SCLT1-207ENST00000506233 IVNS1ABPQ9Y6Y0 642 aa8.03□□□□□ -1.12
SCLT1-207ENST00000506233 RALBP1Q15311 655 aa8.03□□□□□ -1.12
SCLT1-207ENST00000506233 GDPD2Q9HCC8 539 aa8.03□□□□□ -1.12
SCLT1-207ENST00000506233 POLR3EQ9NVU0 708 aa8.03□□□□□ -1.12
SCLT1-207ENST00000506233 CCDC27Q2M243 656 aa8.02□□□□□ -1.12
SCLT1-207ENST00000506233 ADAMTS8Q9UP79 889 aa8.02□□□□□ -1.12
SCLT1-207ENST00000506233 PLEKHG1Q9ULL1 1385 aa8.02□□□□□ -1.13
SCLT1-207ENST00000506233 RGPD5Q99666 1765 aa8.02□□□□□ -1.13
SCLT1-207ENST00000506233 GNPATO15228 680 aa8.02□□□□□ -1.13
SCLT1-207ENST00000506233 PTCH1Q13635 1447 aa8.02□□□□□ -1.13
SCLT1-207ENST00000506233 CLEC11AQ9Y240 323 aa8.02□□□□□ -1.13
SCLT1-207ENST00000506233 OVOS2A0A0J9YW53 1432 aa8.02□□□□□ -1.13
SCLT1-207ENST00000506233 OVOS2Q6IE36 1432 aa8.02□□□□□ -1.13
SCLT1-207ENST00000506233 GLMNQ92990 594 aa8.02□□□□□ -1.13
SCLT1-207ENST00000506233 KIAA1522Q9P206 1035 aaPredicted RBP8.02□□□□□ -1.13
SCLT1-207ENST00000506233 NFAT5O94916 1531 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms