RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 COL5A2P05997 1499 aaPredicted RBP5.41□□□□□ -1.54
TCOF1-208ENST00000506063 PKD1L3Q7Z443 1732 aa5.41□□□□□ -1.54
TCOF1-208ENST00000506063 MLLT1Q03111 559 aaPredicted RBP5.41□□□□□ -1.54
TCOF1-208ENST00000506063 ZNF326Q5BKZ1 582 aaKnown RBP5.41□□□□□ -1.54
TCOF1-208ENST00000506063 KANK4Q5T7N3 995 aaPredicted RBP5.41□□□□□ -1.54
TCOF1-208ENST00000506063 SLC16A10Q8TF71 515 aa5.41□□□□□ -1.54
TCOF1-208ENST00000506063 AKT1S1Q96B36 256 aa5.41□□□□□ -1.54
TCOF1-208ENST00000506063 LRRC4BQ9NT99 713 aa5.41□□□□□ -1.54
TCOF1-208ENST00000506063 THRAP3Q9Y2W1 955 aaKnown RBP5.41□□□□□ -1.54
TCOF1-208ENST00000506063 VIRMAQ69YN4 1812 aaKnown RBP5.41□□□□□ -1.54
TCOF1-208ENST00000506063 KAT6BQ8WYB5 2073 aa5.41□□□□□ -1.54
TCOF1-208ENST00000506063 ABCC11Q96J66 1382 aa5.41□□□□□ -1.54
TCOF1-208ENST00000506063 VPS8Q8N3P4 1428 aa5.4□□□□□ -1.54
TCOF1-208ENST00000506063 COL18A1P39060 1754 aa5.4□□□□□ -1.54
TCOF1-208ENST00000506063 FSTL1Q12841 308 aa5.4□□□□□ -1.54
TCOF1-208ENST00000506063 ABHD8Q96I13 439 aa5.4□□□□□ -1.54
TCOF1-208ENST00000506063 PRDM10Q9NQV6 1147 aa5.4□□□□□ -1.54
TCOF1-208ENST00000506063 BRCA1P38398 1863 aaKnown RBP5.4□□□□□ -1.55
TCOF1-208ENST00000506063 TNRC6CQ9HCJ0 1690 aaKnown RBP5.4□□□□□ -1.55
TCOF1-208ENST00000506063 LY75O60449 1722 aa5.4□□□□□ -1.55
TCOF1-208ENST00000506063 C10orf71Q711Q0 1435 aa5.4□□□□□ -1.55
TCOF1-208ENST00000506063 ANKARQ7Z5J8 1434 aa5.4□□□□□ -1.55
TCOF1-208ENST00000506063 TRPM1Q7Z4N2 1603 aa5.39□□□□□ -1.55
TCOF1-208ENST00000506063 FOXN1O15353 648 aa5.39□□□□□ -1.55
TCOF1-208ENST00000506063 POLD1P28340 1107 aa5.39□□□□□ -1.55
TCOF1-208ENST00000506063 PMFBP1Q8TBY8 1022 aa5.39□□□□□ -1.55
TCOF1-208ENST00000506063 PIK3C2AO00443 1686 aa5.39□□□□□ -1.55
TCOF1-208ENST00000506063 USP19O94966 1318 aa5.39□□□□□ -1.55
TCOF1-208ENST00000506063 ACIN1Q9UKV3 1341 aaKnown RBP5.39□□□□□ -1.55
TCOF1-208ENST00000506063 RGPD5Q99666 1765 aa5.39□□□□□ -1.55
TCOF1-208ENST00000506063 KIF13BQ9NQT8 1826 aa5.39□□□□□ -1.55
TCOF1-208ENST00000506063 SBF1O95248 1867 aa5.39□□□□□ -1.55
TCOF1-208ENST00000506063 PXDNLA1KZ92 1463 aa5.39□□□□□ -1.55
TCOF1-208ENST00000506063 ZC3H6P61129 1189 aaKnown RBP5.38□□□□□ -1.55
TCOF1-208ENST00000506063 CPDO75976 1380 aa5.38□□□□□ -1.55
TCOF1-208ENST00000506063 CRB1P82279 1406 aa5.38□□□□□ -1.55
TCOF1-208ENST00000506063 USP54Q70EL1 1684 aa5.37□□□□□ -1.55
TCOF1-208ENST00000506063 VGFO15240 615 aaPredicted RBP5.37□□□□□ -1.55
TCOF1-208ENST00000506063 CD2APQ9Y5K6 639 aa5.37□□□□□ -1.55
TCOF1-208ENST00000506063 PRR36Q9H6K5 1346 aa5.37□□□□□ -1.55
TCOF1-208ENST00000506063 BRD4O60885 1362 aaPredicted RBP5.37□□□□□ -1.55
TCOF1-208ENST00000506063 DDB1Q16531 1140 aa5.36□□□□□ -1.55
TCOF1-208ENST00000506063 STK26Q9P289 416 aa5.36□□□□□ -1.55
TCOF1-208ENST00000506063 YTHDC2Q9H6S0 1430 aaKnown RBP5.36□□□□□ -1.55
TCOF1-208ENST00000506063 KCPQ6ZWJ8 1503 aa5.36□□□□□ -1.55
TCOF1-208ENST00000506063 N4BP2Q86UW6 1770 aaPredicted RBP5.36□□□□□ -1.55
TCOF1-208ENST00000506063 ARFGEF1Q9Y6D6 1849 aa5.36□□□□□ -1.55
TCOF1-208ENST00000506063 TAF1LQ8IZX4 1826 aa5.35□□□□□ -1.55
TCOF1-208ENST00000506063 TOGARAM1Q9Y4F4 1720 aa5.35□□□□□ -1.55
TCOF1-208ENST00000506063 ADGRF5Q8IZF2 1346 aa5.35□□□□□ -1.55
TCOF1-208ENST00000506063 IGSF1Q8N6C5 1336 aa5.35□□□□□ -1.55
TCOF1-208ENST00000506063 EVA1CP58658 441 aa5.35□□□□□ -1.55
TCOF1-208ENST00000506063 SIRT1Q96EB6 747 aa5.35□□□□□ -1.55
TCOF1-208ENST00000506063 ITSN1Q15811 1721 aa5.34□□□□□ -1.55
TCOF1-208ENST00000506063 ABCC6O95255 1503 aa5.34□□□□□ -1.55
TCOF1-208ENST00000506063 NUP155O75694 1391 aa5.34□□□□□ -1.55
TCOF1-208ENST00000506063 GPRASP1Q5JY77 1395 aa5.34□□□□□ -1.55
TCOF1-208ENST00000506063 TMEM132EQ6IEE7 984 aa5.34□□□□□ -1.55
TCOF1-208ENST00000506063 PIK3C2GO75747 1445 aa5.33□□□□□ -1.56
TCOF1-208ENST00000506063 USP6P35125 1406 aa5.33□□□□□ -1.56
TCOF1-208ENST00000506063 A0A0C4DFX4 3053 aa5.33□□□□□ -1.56
TCOF1-208ENST00000506063 RPGRIP1LQ68CZ1 1315 aa5.33□□□□□ -1.56
TCOF1-208ENST00000506063 COL23A1Q86Y22 540 aaPredicted RBP5.33□□□□□ -1.56
TCOF1-208ENST00000506063 UBR3Q6ZT12 1888 aa5.32□□□□□ -1.56
TCOF1-208ENST00000506063 SZT2Q5T011 3432 aa5.32□□□□□ -1.56
TCOF1-208ENST00000506063 ANKRD30BQ9BXX2 1392 aa5.32□□□□□ -1.56
TCOF1-208ENST00000506063 C5P01031 1676 aa5.32□□□□□ -1.56
TCOF1-208ENST00000506063 CTCFP49711 727 aaPredicted RBP5.32□□□□□ -1.56
TCOF1-208ENST00000506063 LBX1P52954 281 aa5.32□□□□□ -1.56
TCOF1-208ENST00000506063 KCNQ4P56696 695 aa5.32□□□□□ -1.56
TCOF1-208ENST00000506063 MSL1Q68DK7 614 aa5.32□□□□□ -1.56
TCOF1-208ENST00000506063 SMC1BQ8NDV3 1235 aa5.32□□□□□ -1.56
TCOF1-208ENST00000506063 MKI67P46013 3256 aaKnown RBP5.32□□□□□ -1.56
TCOF1-208ENST00000506063 CUL9Q8IWT3 2517 aa5.31□□□□□ -1.56
TCOF1-208ENST00000506063 CCDC88AQ3V6T2 1871 aa5.31□□□□□ -1.56
TCOF1-208ENST00000506063 CCDC85CA6NKD9 419 aa5.31□□□□□ -1.56
TCOF1-208ENST00000506063 HSPA8P11142 646 aaKnown RBP5.31□□□□□ -1.56
TCOF1-208ENST00000506063 NUTM2GQ5VZR2 741 aa5.31□□□□□ -1.56
TCOF1-208ENST00000506063 ACSBG1Q96GR2 724 aa5.31□□□□□ -1.56
TCOF1-208ENST00000506063 WBP1LQ9NX94 342 aa5.31□□□□□ -1.56
TCOF1-208ENST00000506063 TFCP2L1Q9NZI6 479 aa5.31□□□□□ -1.56
TCOF1-208ENST00000506063 CASP8AP2Q9UKL3 1982 aa5.31□□□□□ -1.56
TCOF1-208ENST00000506063 THSD7BQ9C0I4 1608 aa5.3□□□□□ -1.56
TCOF1-208ENST00000506063 PLEKHG2Q9H7P9 1386 aa5.3□□□□□ -1.56
TCOF1-208ENST00000506063 SLIT3O75094 1523 aa5.3□□□□□ -1.56
TCOF1-208ENST00000506063 PAK3O75914 559 aaPredicted RBP5.3□□□□□ -1.56
TCOF1-208ENST00000506063 SLC27A3Q5K4L6 730 aa5.3□□□□□ -1.56
TCOF1-208ENST00000506063 C16orf71Q8IYS4 520 aaPredicted RBP5.3□□□□□ -1.56
TCOF1-208ENST00000506063 RRAGCQ9HB90 399 aa5.3□□□□□ -1.56
TCOF1-208ENST00000506063 DOT1LQ8TEK3 1739 aa5.3□□□□□ -1.56
TCOF1-208ENST00000506063 COL6A3P12111 3177 aa5.3□□□□□ -1.56
TCOF1-208ENST00000506063 NSD2O96028 1365 aa5.29□□□□□ -1.56
TCOF1-208ENST00000506063 CNTNAP1P78357 1384 aa5.29□□□□□ -1.56
TCOF1-208ENST00000506063 ROCK1Q13464 1354 aa5.29□□□□□ -1.56
TCOF1-208ENST00000506063 WDR17Q8IZU2 1322 aa5.29□□□□□ -1.56
TCOF1-208ENST00000506063 AMIGO3Q86WK7 504 aa5.29□□□□□ -1.56
TCOF1-208ENST00000506063 PRAM1Q96QH2 718 aa5.29□□□□□ -1.56
TCOF1-208ENST00000506063 HIRIP3Q9BW71 556 aaPredicted RBP5.29□□□□□ -1.56
TCOF1-208ENST00000506063 CDCA7Q9BWT1 371 aaPredicted RBP5.29□□□□□ -1.56
TCOF1-208ENST00000506063 MKRN1Q9UHC7 482 aaKnown RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms