RNA–Protein interactions for RNA: ENST00000505884.5

CCND3-209, Transcript of cyclin D3, humanhuman

TSL 4

Gene CCND3, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-209ENST00000505884 CSB-PGBD3P0DP91 1061 aa25.65■■□□□ 1.7
CCND3-209ENST00000505884 FAM196AQ6ZSG2 479 aa25.65■■□□□ 1.7
CCND3-209ENST00000505884 SRCAPQ6ZRS2 3230 aa25.64■■□□□ 1.7
CCND3-209ENST00000505884 NFAT5O94916 1531 aa25.64■■□□□ 1.7
CCND3-209ENST00000505884 TERF2IPQ9NYB0 399 aa25.63■■□□□ 1.69
CCND3-209ENST00000505884 THRAP3Q9Y2W1 955 aaKnown RBP25.63■■□□□ 1.69
CCND3-209ENST00000505884 USP47Q96K76 1375 aa25.62■■□□□ 1.69
CCND3-209ENST00000505884 PSDA5PKW4 1024 aaPredicted RBP25.62■■□□□ 1.69
CCND3-209ENST00000505884 PARP4Q9UKK3 1724 aaKnown RBP25.61■■□□□ 1.69
CCND3-209ENST00000505884 WDR17Q8IZU2 1322 aa25.61■■□□□ 1.69
CCND3-209ENST00000505884 LTN1O94822 1766 aa25.6■■□□□ 1.69
CCND3-209ENST00000505884 EZH2Q15910 746 aaKnown RBP25.6■■□□□ 1.69
CCND3-209ENST00000505884 APBA3O96018 575 aa25.59■■□□□ 1.69
CCND3-209ENST00000505884 EDC4Q6P2E9 1401 aaKnown RBP25.59■■□□□ 1.69
CCND3-209ENST00000505884 USP31Q70CQ4 1352 aa25.58■■□□□ 1.69
CCND3-209ENST00000505884 LRRC37A3O60309 1634 aa25.58■■□□□ 1.69
CCND3-209ENST00000505884 WNK3Q9BYP7 1800 aa25.57■■□□□ 1.68
CCND3-209ENST00000505884 DDB1Q16531 1140 aa25.56■■□□□ 1.68
CCND3-209ENST00000505884 PUS7Q96PZ0 661 aaKnown RBP25.56■■□□□ 1.68
CCND3-209ENST00000505884 USP54Q70EL1 1684 aa25.55■■□□□ 1.68
CCND3-209ENST00000505884 TMF1P82094 1093 aa25.54■■□□□ 1.68
CCND3-209ENST00000505884 FBLN1P23142 703 aa25.53■■□□□ 1.68
CCND3-209ENST00000505884 CAMKK2Q96RR4 588 aa25.52■■□□□ 1.68
CCND3-209ENST00000505884 CARD10Q9BWT7 1032 aa25.52■■□□□ 1.68
CCND3-209ENST00000505884 NLRP2Q9NX02 1062 aa25.51■■□□□ 1.67
CCND3-209ENST00000505884 OVOS2A0A0J9YW53 1432 aa25.5■■□□□ 1.67
CCND3-209ENST00000505884 R3HDM1Q15032 1099 aaKnown RBP25.5■■□□□ 1.67
CCND3-209ENST00000505884 OVOS2Q6IE36 1432 aa25.5■■□□□ 1.67
CCND3-209ENST00000505884 PEAK1Q9H792 1746 aa25.49■■□□□ 1.67
CCND3-209ENST00000505884 DISP2A7MBM2 1401 aa25.49■■□□□ 1.67
CCND3-209ENST00000505884 PTF1AQ7RTS3 328 aa25.49■■□□□ 1.67
CCND3-209ENST00000505884 CCER1Q8TC90 406 aaPredicted RBP25.49■■□□□ 1.67
CCND3-209ENST00000505884 LTV1Q96GA3 475 aaPredicted RBP25.49■■□□□ 1.67
CCND3-209ENST00000505884 OVOS2A0A0G2JMS6 1433 aa25.48■■□□□ 1.67
CCND3-209ENST00000505884 NINLQ9Y2I6 1382 aa25.48■■□□□ 1.67
CCND3-209ENST00000505884 MARCH10Q8NA82 808 aaPredicted RBP25.48■■□□□ 1.67
CCND3-209ENST00000505884 ANKRD24Q8TF21 1146 aa25.48■■□□□ 1.67
CCND3-209ENST00000505884 COG3Q96JB2 828 aa25.48■■□□□ 1.67
CCND3-209ENST00000505884 SBF2Q86WG5 1849 aa25.47■■□□□ 1.67
CCND3-209ENST00000505884 SLC24A1O60721 1099 aa25.47■■□□□ 1.67
CCND3-209ENST00000505884 ANKRD36BQ8N2N9 1353 aa25.46■■□□□ 1.67
CCND3-209ENST00000505884 ERBB3P21860 1342 aa25.46■■□□□ 1.67
CCND3-209ENST00000505884 ABCC6O95255 1503 aa25.45■■□□□ 1.66
CCND3-209ENST00000505884 EXOC5O00471 708 aa25.44■■□□□ 1.66
CCND3-209ENST00000505884 CDCA7Q9BWT1 371 aaPredicted RBP25.44■■□□□ 1.66
CCND3-209ENST00000505884 GGNBP2Q9H3C7 697 aa25.44■■□□□ 1.66
CCND3-209ENST00000505884 TIMELESSQ9UNS1 1208 aa25.44■■□□□ 1.66
CCND3-209ENST00000505884 CCDC7Q96M83 1385 aa25.44■■□□□ 1.66
CCND3-209ENST00000505884 CLSPNQ9HAW4 1339 aa25.43■■□□□ 1.66
CCND3-209ENST00000505884 POLR3GLQ9BT43 218 aa25.43■■□□□ 1.66
CCND3-209ENST00000505884 RREB1Q92766 1687 aa25.42■■□□□ 1.66
CCND3-209ENST00000505884 NUP188Q5SRE5 1749 aa25.41■■□□□ 1.66
CCND3-209ENST00000505884 MAP3K19Q56UN5 1328 aa25.4■■□□□ 1.66
CCND3-209ENST00000505884 AMPHP49418 695 aa25.4■■□□□ 1.66
CCND3-209ENST00000505884 IP6K1Q92551 441 aa25.4■■□□□ 1.66
CCND3-209ENST00000505884 FYB1O15117 783 aa25.39■■□□□ 1.66
CCND3-209ENST00000505884 RRS1Q15050 365 aaKnown RBP25.39■■□□□ 1.66
CCND3-209ENST00000505884 MYOM1P52179 1685 aa25.39■■□□□ 1.65
CCND3-209ENST00000505884 CDCA8Q53HL2 280 aa25.38■■□□□ 1.65
CCND3-209ENST00000505884 RGPD2P0DJD1 1756 aa25.38■■□□□ 1.65
CCND3-209ENST00000505884 PARD3Q8TEW0 1356 aa25.37■■□□□ 1.65
CCND3-209ENST00000505884 IL2RBP14784 551 aa25.37■■□□□ 1.65
CCND3-209ENST00000505884 ACSBG1Q96GR2 724 aa25.37■■□□□ 1.65
CCND3-209ENST00000505884 KIF20BQ96Q89 1820 aa25.37■■□□□ 1.65
CCND3-209ENST00000505884 C11orf95C9JLR9 678 aaPredicted RBP25.36■■□□□ 1.65
CCND3-209ENST00000505884 HOXC9P31274 260 aa25.36■■□□□ 1.65
CCND3-209ENST00000505884 BCL11BQ9C0K0 894 aaPredicted RBP25.36■■□□□ 1.65
CCND3-209ENST00000505884 TNS2Q63HR2 1409 aa25.36■■□□□ 1.65
CCND3-209ENST00000505884 KCNQ2O43526 872 aa25.35■■□□□ 1.65
CCND3-209ENST00000505884 CARD14Q9BXL6 1004 aa25.35■■□□□ 1.65
CCND3-209ENST00000505884 KAT6BQ8WYB5 2073 aa25.33■■□□□ 1.65
CCND3-209ENST00000505884 NBPF14Q5TI25 921 aa25.33■■□□□ 1.65
CCND3-209ENST00000505884 LRP5O75197 1615 aa25.33■■□□□ 1.65
CCND3-209ENST00000505884 NSD3Q9BZ95 1437 aa25.31■■□□□ 1.64
CCND3-209ENST00000505884 HSPA5P11021 654 aaKnown RBP25.3■■□□□ 1.64
CCND3-209ENST00000505884 DDX54Q8TDD1 881 aaKnown RBP25.3■■□□□ 1.64
CCND3-209ENST00000505884 FAM208AQ9UK61 1670 aaKnown RBP25.29■■□□□ 1.64
CCND3-209ENST00000505884 USHBP1Q8N6Y0 703 aa25.29■■□□□ 1.64
CCND3-209ENST00000505884 PLSCR1O15162 318 aa25.28■■□□□ 1.64
CCND3-209ENST00000505884 PROM2Q8N271 834 aa25.28■■□□□ 1.64
CCND3-209ENST00000505884 BCL9O00512 1426 aa25.27■■□□□ 1.64
CCND3-209ENST00000505884 RGPD3A6NKT7 1758 aaPredicted RBP25.26■■□□□ 1.63
CCND3-209ENST00000505884 RGPD4Q7Z3J3 1758 aa25.26■■□□□ 1.63
CCND3-209ENST00000505884 EIF4G2P78344 907 aaKnown RBP eCLIP25.26■■□□□ 1.63
CCND3-209ENST00000505884 ANO8Q9HCE9 1232 aaPredicted RBP25.26■■□□□ 1.63
CCND3-209ENST00000505884 NHSQ6T4R5 1651 aa25.26■■□□□ 1.63
CCND3-209ENST00000505884 HSP90AB2PQ58FF8 381 aa25.25■■□□□ 1.63
CCND3-209ENST00000505884 NBPF6Q5VWK0 638 aa25.25■■□□□ 1.63
CCND3-209ENST00000505884 NBPF4Q96M43 638 aa25.25■■□□□ 1.63
CCND3-209ENST00000505884 PPM1GO15355 546 aaPredicted RBP25.24■■□□□ 1.63
CCND3-209ENST00000505884 TXNRD1Q16881 649 aa25.23■■□□□ 1.63
CCND3-209ENST00000505884 EMILIN1Q9Y6C2 1016 aa25.23■■□□□ 1.63
CCND3-209ENST00000505884 RTL1A6NKG5 1358 aa25.22■■□□□ 1.63
CCND3-209ENST00000505884 BTAF1O14981 1849 aa25.21■■□□□ 1.63
CCND3-209ENST00000505884 MEGF6O75095 1541 aa25.21■■□□□ 1.63
CCND3-209ENST00000505884 PDGFDQ9GZP0 370 aaPredicted RBP25.2■■□□□ 1.62
CCND3-209ENST00000505884 TNNT2P45379 298 aaPredicted RBP25.19■■□□□ 1.62
CCND3-209ENST00000505884 SYTL4Q96C24 671 aaPredicted RBP25.19■■□□□ 1.62
CCND3-209ENST00000505884 SMG6Q86US8 1419 aaKnown RBP25.19■■□□□ 1.62
CCND3-209ENST00000505884 SHANK3Q9BYB0 1731 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms