RNA–Protein interactions for RNA: ENST00000505814.5

PTPN20-215, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-215ENST00000505814 ITSN1Q15811 1721 aa13.1□□□□□ -0.31
PTPN20-215ENST00000505814 ABCA3Q99758 1704 aa13.1□□□□□ -0.31
PTPN20-215ENST00000505814 L3MBTL2Q969R5 705 aa13.09□□□□□ -0.31
PTPN20-215ENST00000505814 PRAM1Q96QH2 718 aa13.09□□□□□ -0.31
PTPN20-215ENST00000505814 ORAI2Q96SN7 254 aa13.09□□□□□ -0.31
PTPN20-215ENST00000505814 SIN3AQ96ST3 1273 aa13.09□□□□□ -0.31
PTPN20-215ENST00000505814 CRYBG1Q9Y4K1 1723 aa13.09□□□□□ -0.31
PTPN20-215ENST00000505814 RALGAPBQ86X10 1494 aa13.09□□□□□ -0.31
PTPN20-215ENST00000505814 QRICH2Q9H0J4 1663 aa13.08□□□□□ -0.31
PTPN20-215ENST00000505814 FAM205CA6NFA0 338 aa13.08□□□□□ -0.32
PTPN20-215ENST00000505814 HOXB1P14653 301 aaPredicted RBP13.08□□□□□ -0.32
PTPN20-215ENST00000505814 ALS2Q96Q42 1657 aa13.08□□□□□ -0.32
PTPN20-215ENST00000505814 MARF1Q9Y4F3 1742 aaKnown RBP13.07□□□□□ -0.32
PTPN20-215ENST00000505814 PRR36Q9H6K5 1346 aa13.07□□□□□ -0.32
PTPN20-215ENST00000505814 KDM2AQ9Y2K7 1162 aa13.06□□□□□ -0.32
PTPN20-215ENST00000505814 EIF3AQ14152 1382 aaKnown RBP13.06□□□□□ -0.32
PTPN20-215ENST00000505814 NBPF1Q3BBV0 1214 aa13.05□□□□□ -0.32
PTPN20-215ENST00000505814 DDX17Q92841 729 aaKnown RBP13.05□□□□□ -0.32
PTPN20-215ENST00000505814 HS3ST6Q96QI5 342 aa13.05□□□□□ -0.32
PTPN20-215ENST00000505814 NPHP3Q7Z494 1330 aa13.05□□□□□ -0.32
PTPN20-215ENST00000505814 HS6ST3Q8IZP7 471 aa13.04□□□□□ -0.32
PTPN20-215ENST00000505814 TRAK1Q9UPV9 953 aa13.04□□□□□ -0.32
PTPN20-215ENST00000505814 SBNO2Q9Y2G9 1366 aa13.04□□□□□ -0.32
PTPN20-215ENST00000505814 LRRC59Q96AG4 307 aaKnown RBP13.03□□□□□ -0.32
PTPN20-215ENST00000505814 ZSWIM6Q9HCJ5 1215 aa13.03□□□□□ -0.32
PTPN20-215ENST00000505814 NBPF8Q3BBV2 869 aa13.02□□□□□ -0.33
PTPN20-215ENST00000505814 SBNO1A3KN83 1393 aa13.02□□□□□ -0.33
PTPN20-215ENST00000505814 TNS3Q68CZ2 1445 aa13.02□□□□□ -0.33
PTPN20-215ENST00000505814 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.02□□□□□ -0.33
PTPN20-215ENST00000505814 POTEB3A0JP26 581 aa13.01□□□□□ -0.33
PTPN20-215ENST00000505814 WASLO00401 505 aaPredicted RBP13.01□□□□□ -0.33
PTPN20-215ENST00000505814 POTEBQ6S5H4 581 aa13.01□□□□□ -0.33
PTPN20-215ENST00000505814 CLSPNQ9HAW4 1339 aa13.01□□□□□ -0.33
PTPN20-215ENST00000505814 POLR3AO14802 1390 aaPredicted RBP13.01□□□□□ -0.33
PTPN20-215ENST00000505814 SPATA31A3Q5VYP0 1347 aa13□□□□□ -0.33
PTPN20-215ENST00000505814 UPF1Q92900 1129 aaKnown RBP eCLIP13□□□□□ -0.33
PTPN20-215ENST00000505814 ESCO1Q5FWF5 840 aa12.99□□□□□ -0.33
PTPN20-215ENST00000505814 POGKQ9P215 609 aa12.99□□□□□ -0.33
PTPN20-215ENST00000505814 NRKQ7Z2Y5 1582 aa12.98□□□□□ -0.33
PTPN20-215ENST00000505814 ERBB3P21860 1342 aa12.98□□□□□ -0.33
PTPN20-215ENST00000505814 MINK1Q8N4C8 1332 aaPredicted RBP12.98□□□□□ -0.33
PTPN20-215ENST00000505814 SAFB2Q14151 953 aaKnown RBP eCLIP12.98□□□□□ -0.33
PTPN20-215ENST00000505814 PHRF1Q9P1Y6 1649 aaKnown RBP12.98□□□□□ -0.33
PTPN20-215ENST00000505814 CDK12Q9NYV4 1490 aaPredicted RBP12.97□□□□□ -0.33
PTPN20-215ENST00000505814 CENPJQ9HC77 1338 aaPredicted RBP12.97□□□□□ -0.33
PTPN20-215ENST00000505814 C2orf72A6NCS6 295 aa12.97□□□□□ -0.33
PTPN20-215ENST00000505814 FOXO3O43524 673 aa12.97□□□□□ -0.33
PTPN20-215ENST00000505814 PPP1R37O75864 691 aa12.97□□□□□ -0.33
PTPN20-215ENST00000505814 ROCK2O75116 1388 aaKnown RBP12.96□□□□□ -0.33
PTPN20-215ENST00000505814 TONSLQ96HA7 1378 aa12.96□□□□□ -0.33
PTPN20-215ENST00000505814 KIF3CO14782 793 aa12.96□□□□□ -0.33
PTPN20-215ENST00000505814 GPR153Q6NV75 609 aa12.96□□□□□ -0.33
PTPN20-215ENST00000505814 HIRIP3Q9BW71 556 aaPredicted RBP12.96□□□□□ -0.33
PTPN20-215ENST00000505814 SLIT2O94813 1529 aa12.96□□□□□ -0.33
PTPN20-215ENST00000505814 NRAPQ86VF7 1730 aa12.96□□□□□ -0.34
PTPN20-215ENST00000505814 NWD2Q9ULI1 1742 aa12.96□□□□□ -0.34
PTPN20-215ENST00000505814 SSH2Q76I76 1423 aa12.96□□□□□ -0.34
PTPN20-215ENST00000505814 USP54Q70EL1 1684 aa12.96□□□□□ -0.34
PTPN20-215ENST00000505814 AKAP12Q02952 1782 aa12.95□□□□□ -0.34
PTPN20-215ENST00000505814 NUTM2FA1L443 756 aa12.95□□□□□ -0.34
PTPN20-215ENST00000505814 PLCH1Q4KWH8 1693 aa12.95□□□□□ -0.34
PTPN20-215ENST00000505814 ARHGEF10O15013 1369 aa12.94□□□□□ -0.34
PTPN20-215ENST00000505814 PLEKHG3A1L390 1219 aa12.94□□□□□ -0.34
PTPN20-215ENST00000505814 NEUROD1Q13562 356 aa12.94□□□□□ -0.34
PTPN20-215ENST00000505814 TMC2Q8TDI7 906 aa12.94□□□□□ -0.34
PTPN20-215ENST00000505814 MON2Q7Z3U7 1717 aa12.93□□□□□ -0.34
PTPN20-215ENST00000505814 BCL9LQ86UU0 1499 aa12.93□□□□□ -0.34
PTPN20-215ENST00000505814 SPNS2Q8IVW8 549 aa12.93□□□□□ -0.34
PTPN20-215ENST00000505814 NUDT16Q96DE0 195 aaKnown RBP12.93□□□□□ -0.34
PTPN20-215ENST00000505814 ATRNO75882 1429 aa12.93□□□□□ -0.34
PTPN20-215ENST00000505814 KRT28Q7Z3Y7 464 aa12.92□□□□□ -0.34
PTPN20-215ENST00000505814 FNBP4Q8N3X1 1017 aaPredicted RBP12.92□□□□□ -0.34
PTPN20-215ENST00000505814 CDK19Q9BWU1 502 aa12.92□□□□□ -0.34
PTPN20-215ENST00000505814 PIK3C2AO00443 1686 aa12.92□□□□□ -0.34
PTPN20-215ENST00000505814 BRD4O60885 1362 aaPredicted RBP12.92□□□□□ -0.34
PTPN20-215ENST00000505814 PPIP5K1Q6PFW1 1433 aa12.91□□□□□ -0.34
PTPN20-215ENST00000505814 XPCQ01831 940 aaPredicted RBP12.91□□□□□ -0.34
PTPN20-215ENST00000505814 ARSIQ5FYB1 569 aa12.91□□□□□ -0.34
PTPN20-215ENST00000505814 TIMELESSQ9UNS1 1208 aa12.91□□□□□ -0.34
PTPN20-215ENST00000505814 CD163L1Q9NR16 1453 aa12.91□□□□□ -0.34
PTPN20-215ENST00000505814 AFF2P51816 1311 aa12.9□□□□□ -0.34
PTPN20-215ENST00000505814 CPSF1Q10570 1443 aaKnown RBP12.9□□□□□ -0.34
PTPN20-215ENST00000505814 SLIT3O75094 1523 aa12.9□□□□□ -0.34
PTPN20-215ENST00000505814 KRTAP3-3Q9BYR6 98 aa12.9□□□□□ -0.34
PTPN20-215ENST00000505814 KRTAP3-2Q9BYR7 98 aa12.9□□□□□ -0.34
PTPN20-215ENST00000505814 GLI3P10071 1580 aa12.9□□□□□ -0.35
PTPN20-215ENST00000505814 LMO7Q8WWI1 1683 aa12.89□□□□□ -0.35
PTPN20-215ENST00000505814 COL14A1Q05707 1796 aaKnown RBP12.89□□□□□ -0.35
PTPN20-215ENST00000505814 USP6P35125 1406 aa12.89□□□□□ -0.35
PTPN20-215ENST00000505814 VARS2Q5ST30 1063 aaKnown RBP12.89□□□□□ -0.35
PTPN20-215ENST00000505814 PMFBP1Q8TBY8 1022 aa12.89□□□□□ -0.35
PTPN20-215ENST00000505814 USP19O94966 1318 aa12.88□□□□□ -0.35
PTPN20-215ENST00000505814 RGS12O14924 1447 aa12.88□□□□□ -0.35
PTPN20-215ENST00000505814 ZNF772Q68DY9 489 aaPredicted RBP12.88□□□□□ -0.35
PTPN20-215ENST00000505814 PSME1Q06323 249 aa12.87□□□□□ -0.35
PTPN20-215ENST00000505814 MMRN1Q13201 1228 aa12.87□□□□□ -0.35
PTPN20-215ENST00000505814 TESK2Q96S53 571 aa12.87□□□□□ -0.35
PTPN20-215ENST00000505814 ACEP12821 1306 aa12.87□□□□□ -0.35
PTPN20-215ENST00000505814 EP400Q96L91 3159 aa12.86□□□□□ -0.35
PTPN20-215ENST00000505814 ATAD2Q6PL18 1390 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms