RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 R3HDM1Q15032 1099 aaKnown RBP10.89□□□□□ -0.67
VCAN-206ENST00000505615 ZNF326Q5BKZ1 582 aaKnown RBP10.89□□□□□ -0.67
VCAN-206ENST00000505615 FMN2Q9NZ56 1722 aa10.89□□□□□ -0.67
VCAN-206ENST00000505615 NUP155O75694 1391 aa10.89□□□□□ -0.67
VCAN-206ENST00000505615 ESCO1Q5FWF5 840 aa10.88□□□□□ -0.67
VCAN-206ENST00000505615 SPATA31A3Q5VYP0 1347 aa10.87□□□□□ -0.67
VCAN-206ENST00000505615 NAIPQ13075 1403 aa10.87□□□□□ -0.67
VCAN-206ENST00000505615 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.87□□□□□ -0.67
VCAN-206ENST00000505615 EN1Q05925 392 aaPredicted RBP10.87□□□□□ -0.67
VCAN-206ENST00000505615 ZFP91Q96JP5 570 aaPredicted RBP10.87□□□□□ -0.67
VCAN-206ENST00000505615 ZSWIM6Q9HCJ5 1215 aa10.87□□□□□ -0.67
VCAN-206ENST00000505615 RREB1Q92766 1687 aa10.87□□□□□ -0.67
VCAN-206ENST00000505615 RGPD8O14715 1765 aaPredicted RBP10.87□□□□□ -0.67
VCAN-206ENST00000505615 PPLO60437 1756 aa10.87□□□□□ -0.67
VCAN-206ENST00000505615 ROCK1Q13464 1354 aa10.87□□□□□ -0.67
VCAN-206ENST00000505615 ERBB3P21860 1342 aa10.86□□□□□ -0.67
VCAN-206ENST00000505615 THSD7AQ9UPZ6 1657 aa10.86□□□□□ -0.67
VCAN-206ENST00000505615 RIMBP2O15034 1052 aa10.86□□□□□ -0.67
VCAN-206ENST00000505615 FAM50AQ14320 339 aaKnown RBP10.86□□□□□ -0.67
VCAN-206ENST00000505615 CCDC144AA2RUR9 1427 aa10.85□□□□□ -0.67
VCAN-206ENST00000505615 NUP188Q5SRE5 1749 aa10.85□□□□□ -0.67
VCAN-206ENST00000505615 VGFO15240 615 aaPredicted RBP10.85□□□□□ -0.67
VCAN-206ENST00000505615 LRPPRCP42704 1394 aaKnown RBP10.85□□□□□ -0.67
VCAN-206ENST00000505615 TNS3Q68CZ2 1445 aa10.84□□□□□ -0.67
VCAN-206ENST00000505615 KNDC1Q76NI1 1749 aa10.84□□□□□ -0.67
VCAN-206ENST00000505615 ADGRB2O60241 1585 aa10.84□□□□□ -0.67
VCAN-206ENST00000505615 CAMTA1Q9Y6Y1 1673 aa10.84□□□□□ -0.67
VCAN-206ENST00000505615 IFT172Q9UG01 1749 aa10.84□□□□□ -0.67
VCAN-206ENST00000505615 GPR153Q6NV75 609 aa10.83□□□□□ -0.68
VCAN-206ENST00000505615 PHF8Q9UPP1 1060 aa10.83□□□□□ -0.68
VCAN-206ENST00000505615 UTRNP46939 3433 aa10.82□□□□□ -0.68
VCAN-206ENST00000505615 VARS2Q5ST30 1063 aaKnown RBP10.82□□□□□ -0.68
VCAN-206ENST00000505615 CCDC9Q9Y3X0 531 aaKnown RBP10.82□□□□□ -0.68
VCAN-206ENST00000505615 TECPR2O15040 1411 aa10.82□□□□□ -0.68
VCAN-206ENST00000505615 LOC105371045A0A1W2PR82 267 aa10.81□□□□□ -0.68
VCAN-206ENST00000505615 EZH2Q15910 746 aaKnown RBP10.81□□□□□ -0.68
VCAN-206ENST00000505615 FAM98CQ17RN3 349 aaKnown RBP10.81□□□□□ -0.68
VCAN-206ENST00000505615 FAM182BQ5T319 152 aa10.81□□□□□ -0.68
VCAN-206ENST00000505615 CABLES1Q8TDN4 633 aa10.81□□□□□ -0.68
VCAN-206ENST00000505615 COL14A1Q05707 1796 aaKnown RBP10.8□□□□□ -0.68
VCAN-206ENST00000505615 NUTM2FA1L443 756 aa10.8□□□□□ -0.68
VCAN-206ENST00000505615 CAMKK2Q96RR4 588 aa10.8□□□□□ -0.68
VCAN-206ENST00000505615 TRPM3Q9HCF6 1732 aaPredicted RBP10.8□□□□□ -0.68
VCAN-206ENST00000505615 CRYBG1Q9Y4K1 1723 aa10.8□□□□□ -0.68
VCAN-206ENST00000505615 PLEKHH1Q9ULM0 1364 aa10.79□□□□□ -0.68
VCAN-206ENST00000505615 FAM83GA6ND36 823 aa10.79□□□□□ -0.68
VCAN-206ENST00000505615 KRT28Q7Z3Y7 464 aa10.79□□□□□ -0.68
VCAN-206ENST00000505615 SBNO1A3KN83 1393 aa10.78□□□□□ -0.68
VCAN-206ENST00000505615 CHD4Q14839 1912 aa10.78□□□□□ -0.68
VCAN-206ENST00000505615 A0A0G2JS52 829 aa10.78□□□□□ -0.68
VCAN-206ENST00000505615 MYT1Q01538 1121 aa10.78□□□□□ -0.68
VCAN-206ENST00000505615 IFFO2Q5TF58 517 aa10.78□□□□□ -0.68
VCAN-206ENST00000505615 NRXN1Q9ULB1 1477 aa10.78□□□□□ -0.68
VCAN-206ENST00000505615 ALS2Q96Q42 1657 aa10.78□□□□□ -0.68
VCAN-206ENST00000505615 PARD3Q8TEW0 1356 aa10.77□□□□□ -0.68
VCAN-206ENST00000505615 NINLQ9Y2I6 1382 aa10.77□□□□□ -0.68
VCAN-206ENST00000505615 WAPLQ7Z5K2 1190 aa10.77□□□□□ -0.69
VCAN-206ENST00000505615 ZNF687Q8N1G0 1237 aa10.77□□□□□ -0.69
VCAN-206ENST00000505615 FBXO22Q8NEZ5 403 aa10.77□□□□□ -0.69
VCAN-206ENST00000505615 HAP1P54257 671 aaPredicted RBP10.76□□□□□ -0.69
VCAN-206ENST00000505615 SPATA31A5Q5VU36 1347 aa10.76□□□□□ -0.69
VCAN-206ENST00000505615 SPATA31A7Q8IWB4 1347 aa10.76□□□□□ -0.69
VCAN-206ENST00000505615 ARHGEF10O15013 1369 aa10.76□□□□□ -0.69
VCAN-206ENST00000505615 CEP350Q5VT06 3117 aa10.75□□□□□ -0.69
VCAN-206ENST00000505615 RRBP1Q9P2E9 1410 aaKnown RBP10.75□□□□□ -0.69
VCAN-206ENST00000505615 CASZ1Q86V15 1759 aa10.75□□□□□ -0.69
VCAN-206ENST00000505615 RPGRIP1LQ68CZ1 1315 aa10.75□□□□□ -0.69
VCAN-206ENST00000505615 ABCC11Q96J66 1382 aa10.75□□□□□ -0.69
VCAN-206ENST00000505615 TRIM37O94972 964 aa10.74□□□□□ -0.69
VCAN-206ENST00000505615 ZNF784Q8NCA9 323 aaPredicted RBP10.74□□□□□ -0.69
VCAN-206ENST00000505615 RNF166Q96A37 237 aaPredicted RBP10.74□□□□□ -0.69
VCAN-206ENST00000505615 BTG4Q9NY30 223 aa10.74□□□□□ -0.69
VCAN-206ENST00000505615 NRKQ7Z2Y5 1582 aa10.73□□□□□ -0.69
VCAN-206ENST00000505615 SENP3-EIF4A1A0A087X0R7 540 aa10.72□□□□□ -0.69
VCAN-206ENST00000505615 NLRP6P59044 892 aa10.72□□□□□ -0.69
VCAN-206ENST00000505615 PSME1Q06323 249 aa10.72□□□□□ -0.69
VCAN-206ENST00000505615 SPON1Q9HCB6 807 aa10.72□□□□□ -0.69
VCAN-206ENST00000505615 STK26Q9P289 416 aa10.72□□□□□ -0.69
VCAN-206ENST00000505615 ADGRF5Q8IZF2 1346 aa10.72□□□□□ -0.69
VCAN-206ENST00000505615 MYOM1P52179 1685 aa10.72□□□□□ -0.69
VCAN-206ENST00000505615 RGPD3A6NKT7 1758 aaPredicted RBP10.72□□□□□ -0.69
VCAN-206ENST00000505615 RGPD4Q7Z3J3 1758 aa10.72□□□□□ -0.69
VCAN-206ENST00000505615 KCNQ2O43526 872 aa10.71□□□□□ -0.69
VCAN-206ENST00000505615 APBA3O96018 575 aa10.71□□□□□ -0.69
VCAN-206ENST00000505615 AMER1Q5JTC6 1135 aaPredicted RBP10.71□□□□□ -0.69
VCAN-206ENST00000505615 BCL11BQ9C0K0 894 aaPredicted RBP10.71□□□□□ -0.69
VCAN-206ENST00000505615 YTHDC2Q9H6S0 1430 aaKnown RBP10.7□□□□□ -0.7
VCAN-206ENST00000505615 LMOD2Q6P5Q4 547 aa10.7□□□□□ -0.7
VCAN-206ENST00000505615 FAM196AQ6ZSG2 479 aa10.7□□□□□ -0.7
VCAN-206ENST00000505615 MFRPQ9BY79 579 aa10.7□□□□□ -0.7
VCAN-206ENST00000505615 PPP1R1BQ9UD71 204 aaPredicted RBP10.7□□□□□ -0.7
VCAN-206ENST00000505615 SBF2Q86WG5 1849 aa10.7□□□□□ -0.7
VCAN-206ENST00000505615 SPATA31A1Q5TZJ5 1347 aa10.69□□□□□ -0.7
VCAN-206ENST00000505615 KIF3CO14782 793 aa10.69□□□□□ -0.7
VCAN-206ENST00000505615 ARSIQ5FYB1 569 aa10.69□□□□□ -0.7
VCAN-206ENST00000505615 PIK3C2GO75747 1445 aa10.68□□□□□ -0.7
VCAN-206ENST00000505615 C1QTNF8P60827 252 aa10.68□□□□□ -0.7
VCAN-206ENST00000505615 TMEM132EQ6IEE7 984 aa10.68□□□□□ -0.7
VCAN-206ENST00000505615 PHRF1Q9P1Y6 1649 aaKnown RBP10.68□□□□□ -0.7
VCAN-206ENST00000505615 ANKARQ7Z5J8 1434 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms