RNA–Protein interactions for RNA: ENST00000505402.1

CAST-216, Transcript of calpastatin, humanhuman

TSL 4

Gene CAST, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-216ENST00000505402 NLRP1Q9C000 1473 aa6.89□□□□□ -1.31
CAST-216ENST00000505402 POLA1P09884 1462 aaPredicted RBP6.88□□□□□ -1.31
CAST-216ENST00000505402 MIA2Q96PC5 1412 aa6.88□□□□□ -1.31
CAST-216ENST00000505402 CTIFO43310 598 aaKnown RBP6.88□□□□□ -1.31
CAST-216ENST00000505402 NEFHP12036 1026 aa6.88□□□□□ -1.31
CAST-216ENST00000505402 NOP2P46087 812 aaKnown RBP6.88□□□□□ -1.31
CAST-216ENST00000505402 CBX1P83916 185 aa6.88□□□□□ -1.31
CAST-216ENST00000505402 TERF2Q15554 542 aa6.88□□□□□ -1.31
CAST-216ENST00000505402 ICE2Q659A1 982 aa6.88□□□□□ -1.31
CAST-216ENST00000505402 CASC1Q6TDU7 716 aa6.88□□□□□ -1.31
CAST-216ENST00000505402 FBXW7Q969H0 707 aa6.88□□□□□ -1.31
CAST-216ENST00000505402 FEZ2Q9UHY8 353 aaPredicted RBP6.88□□□□□ -1.31
CAST-216ENST00000505402 UACAQ9BZF9 1416 aa6.87□□□□□ -1.31
CAST-216ENST00000505402 GOLGA6L6A8MZA4 724 aa6.87□□□□□ -1.31
CAST-216ENST00000505402 GOLGA6L22H0YM25 854 aa6.87□□□□□ -1.31
CAST-216ENST00000505402 CAPN2P17655 700 aa6.87□□□□□ -1.31
CAST-216ENST00000505402 DDIT3P35638 169 aa6.87□□□□□ -1.31
CAST-216ENST00000505402 KIAA2012Q0VF49 1180 aa6.87□□□□□ -1.31
CAST-216ENST00000505402 ATP2B3Q16720 1220 aa6.87□□□□□ -1.31
CAST-216ENST00000505402 KLHL40Q2TBA0 621 aa6.87□□□□□ -1.31
CAST-216ENST00000505402 SWT1Q5T5J6 900 aaKnown RBP6.87□□□□□ -1.31
CAST-216ENST00000505402 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.87□□□□□ -1.31
CAST-216ENST00000505402 FAM210AQ96ND0 272 aa6.87□□□□□ -1.31
CAST-216ENST00000505402 TERF2IPQ9NYB0 399 aa6.87□□□□□ -1.31
CAST-216ENST00000505402 PLA2G2EQ9NZK7 142 aa6.87□□□□□ -1.31
CAST-216ENST00000505402 TRIM6-TRIM34B2RNG4 842 aa6.86□□□□□ -1.31
CAST-216ENST00000505402 PPP1R3GB7ZBB8 358 aa6.86□□□□□ -1.31
CAST-216ENST00000505402 REC8O95072 547 aa6.86□□□□□ -1.31
CAST-216ENST00000505402 TPM3P06753 285 aa6.86□□□□□ -1.31
CAST-216ENST00000505402 TNNT3P45378 269 aaPredicted RBP6.86□□□□□ -1.31
CAST-216ENST00000505402 GTF2A1P52655 376 aaPredicted RBP6.86□□□□□ -1.31
CAST-216ENST00000505402 PTPN5P54829 565 aa6.86□□□□□ -1.31
CAST-216ENST00000505402 PROX2Q3B8N5 592 aa6.86□□□□□ -1.31
CAST-216ENST00000505402 NBPF6Q5VWK0 638 aa6.86□□□□□ -1.31
CAST-216ENST00000505402 NBPF5PQ86XG9 351 aaPredicted RBP6.86□□□□□ -1.31
CAST-216ENST00000505402 MRPL50Q8N5N7 158 aaKnown RBP6.86□□□□□ -1.31
CAST-216ENST00000505402 OTUD6BQ8N6M0 293 aa6.86□□□□□ -1.31
CAST-216ENST00000505402 GOLGA6L1Q8N7Z2 621 aa6.86□□□□□ -1.31
CAST-216ENST00000505402 PNISRQ8TF01 805 aaKnown RBP6.86□□□□□ -1.31
CAST-216ENST00000505402 DDX12PQ92771 950 aa6.86□□□□□ -1.31
CAST-216ENST00000505402 SNX21Q969T3 373 aa6.86□□□□□ -1.31
CAST-216ENST00000505402 NBPF4Q96M43 638 aa6.86□□□□□ -1.31
CAST-216ENST00000505402 TBC1D32Q96NH3 1257 aa6.86□□□□□ -1.31
CAST-216ENST00000505402 TRIM34Q9BYJ4 488 aa6.86□□□□□ -1.31
CAST-216ENST00000505402 HSPA5P11021 654 aaKnown RBP6.85□□□□□ -1.31
CAST-216ENST00000505402 SETDB1Q15047 1291 aa6.85□□□□□ -1.31
CAST-216ENST00000505402 C6orf132Q5T0Z8 1188 aa6.85□□□□□ -1.31
CAST-216ENST00000505402 PIBF1Q8WXW3 757 aa6.85□□□□□ -1.31
CAST-216ENST00000505402 ZNF592Q92610 1267 aa6.85□□□□□ -1.31
CAST-216ENST00000505402 MKL1Q969V6 931 aa6.85□□□□□ -1.31
CAST-216ENST00000505402 EPAS1Q99814 870 aa6.85□□□□□ -1.31
CAST-216ENST00000505402 RASSF4Q9H2L5 321 aa6.85□□□□□ -1.31
CAST-216ENST00000505402 SPTLC3Q9NUV7 552 aa6.85□□□□□ -1.31
CAST-216ENST00000505402 FAM53CQ9NYF3 392 aa6.85□□□□□ -1.31
CAST-216ENST00000505402 DDX41Q9UJV9 622 aaKnown RBP6.85□□□□□ -1.31
CAST-216ENST00000505402 ARAP1Q96P48 1450 aa6.85□□□□□ -1.31
CAST-216ENST00000505402 CGNL1Q0VF96 1302 aa6.84□□□□□ -1.31
CAST-216ENST00000505402 DHX16O60231 1041 aaKnown RBP6.84□□□□□ -1.31
CAST-216ENST00000505402 GSCP56915 257 aaPredicted RBP6.84□□□□□ -1.31
CAST-216ENST00000505402 LMOD2Q6P5Q4 547 aa6.84□□□□□ -1.31
CAST-216ENST00000505402 CCDC91Q7Z6B0 441 aa6.84□□□□□ -1.31
CAST-216ENST00000505402 SMC5Q8IY18 1101 aa6.84□□□□□ -1.31
CAST-216ENST00000505402 RBM33Q96EV2 1170 aaKnown RBP6.84□□□□□ -1.31
CAST-216ENST00000505402 TBC1D2Q9BYX2 928 aa6.84□□□□□ -1.31
CAST-216ENST00000505402 KANK1Q14678 1352 aa6.83□□□□□ -1.32
CAST-216ENST00000505402 TOP2AP11388 1531 aaKnown RBP6.83□□□□□ -1.32
CAST-216ENST00000505402 GOLGA8CPA6NN73 597 aa6.83□□□□□ -1.32
CAST-216ENST00000505402 PPP1R12AO14974 1030 aaPredicted RBP6.83□□□□□ -1.32
CAST-216ENST00000505402 ZNF853P0CG23 659 aa6.83□□□□□ -1.32
CAST-216ENST00000505402 LIG1P18858 919 aa6.83□□□□□ -1.32
CAST-216ENST00000505402 CHAF1AQ13111 956 aaPredicted RBP6.83□□□□□ -1.32
CAST-216ENST00000505402 FKBP5Q13451 457 aaPredicted RBP6.83□□□□□ -1.32
CAST-216ENST00000505402 RAB3GAP1Q15042 981 aa6.83□□□□□ -1.32
CAST-216ENST00000505402 PDIA6Q15084 440 aa6.83□□□□□ -1.32
CAST-216ENST00000505402 RABEP1Q15276 862 aa6.83□□□□□ -1.32
CAST-216ENST00000505402 E2F4Q16254 413 aa6.83□□□□□ -1.32
CAST-216ENST00000505402 UVSSAQ2YD98 709 aa6.83□□□□□ -1.32
CAST-216ENST00000505402 CCDC184Q52MB2 194 aa6.83□□□□□ -1.32
CAST-216ENST00000505402 THSD4Q6ZMP0 1018 aa6.83□□□□□ -1.32
CAST-216ENST00000505402 FAM43BQ6ZT52 329 aaPredicted RBP6.83□□□□□ -1.32
CAST-216ENST00000505402 GAS2L3Q86XJ1 694 aa6.83□□□□□ -1.32
CAST-216ENST00000505402 SUGP1Q8IWZ8 645 aaKnown RBP6.83□□□□□ -1.32
CAST-216ENST00000505402 KRT222Q8N1A0 295 aa6.83□□□□□ -1.32
CAST-216ENST00000505402 NGEFQ8N5V2 710 aa6.83□□□□□ -1.32
CAST-216ENST00000505402 WNT2BQ93097 391 aa6.83□□□□□ -1.32
CAST-216ENST00000505402 SIRT1Q96EB6 747 aa6.83□□□□□ -1.32
CAST-216ENST00000505402 NBPF3Q9H094 633 aa6.83□□□□□ -1.32
CAST-216ENST00000505402 RABGEF1Q9UJ41 708 aa6.83□□□□□ -1.32
CAST-216ENST00000505402 UNC13AQ9UPW8 1703 aa6.83□□□□□ -1.32
CAST-216ENST00000505402 SPATA31E1Q6ZUB1 1445 aa6.83□□□□□ -1.32
CAST-216ENST00000505402 DHX29Q7Z478 1369 aaKnown RBP6.82□□□□□ -1.32
CAST-216ENST00000505402 CCDC196A0A1B0GTZ2 297 aa6.82□□□□□ -1.32
CAST-216ENST00000505402 E9PSI1 815 aa6.82□□□□□ -1.32
CAST-216ENST00000505402 NRDCO43847 1150 aa6.82□□□□□ -1.32
CAST-216ENST00000505402 CASQ1P31415 396 aa6.82□□□□□ -1.32
CAST-216ENST00000505402 SLFNL1Q499Z3 407 aa6.82□□□□□ -1.32
CAST-216ENST00000505402 NOM1Q5C9Z4 860 aaKnown RBP6.82□□□□□ -1.32
CAST-216ENST00000505402 RNF20Q5VTR2 975 aa6.82□□□□□ -1.32
CAST-216ENST00000505402 CAVIN1Q6NZI2 390 aaKnown RBP6.82□□□□□ -1.32
CAST-216ENST00000505402 GPATCH11Q8N954 259 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms