RNA–Protein interactions for RNA: ENST00000505306.5

ITGA3-204, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 5,479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-204ENST00000505306 CDCA7LQ96GN5 454 aa20■□□□□ 0.79
ITGA3-204ENST00000505306 ATP2B2Q01814 1243 aa20■□□□□ 0.79
ITGA3-204ENST00000505306 AAMPQ13685 434 aa20■□□□□ 0.79
ITGA3-204ENST00000505306 NAIPQ13075 1403 aa20■□□□□ 0.79
ITGA3-204ENST00000505306 CNKSR2Q8WXI2 1034 aa19.99■□□□□ 0.79
ITGA3-204ENST00000505306 FOSBP53539 338 aa19.99■□□□□ 0.79
ITGA3-204ENST00000505306 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.99■□□□□ 0.79
ITGA3-204ENST00000505306 TPM2P07951 284 aa19.99■□□□□ 0.79
ITGA3-204ENST00000505306 HSPA2P54652 639 aa19.99■□□□□ 0.79
ITGA3-204ENST00000505306 C1orf115Q9H7X2 142 aa19.99■□□□□ 0.79
ITGA3-204ENST00000505306 RRP12Q5JTH9 1297 aaKnown RBP19.99■□□□□ 0.79
ITGA3-204ENST00000505306 NOB1Q9ULX3 412 aaKnown RBP19.99■□□□□ 0.79
ITGA3-204ENST00000505306 AMOTQ4VCS5 1084 aa19.99■□□□□ 0.79
ITGA3-204ENST00000505306 CCDC85AQ96PX6 553 aaPredicted RBP19.99■□□□□ 0.79
ITGA3-204ENST00000505306 CHMP5Q9NZZ3 219 aa19.98■□□□□ 0.79
ITGA3-204ENST00000505306 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.98■□□□□ 0.79
ITGA3-204ENST00000505306 IGHMBP2P38935 993 aaKnown RBP19.97■□□□□ 0.79
ITGA3-204ENST00000505306 FAM135AQ9P2D6 1515 aa19.96■□□□□ 0.79
ITGA3-204ENST00000505306 VPS37CA5D8V6 355 aaPredicted RBP19.96■□□□□ 0.79
ITGA3-204ENST00000505306 NFE2L2Q16236 605 aa19.96■□□□□ 0.79
ITGA3-204ENST00000505306 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.96■□□□□ 0.79
ITGA3-204ENST00000505306 TSR1Q2NL82 804 aaKnown RBP19.96■□□□□ 0.79
ITGA3-204ENST00000505306 BRMS1Q9HCU9 246 aa19.96■□□□□ 0.79
ITGA3-204ENST00000505306 TPM3P06753 285 aa19.96■□□□□ 0.79
ITGA3-204ENST00000505306 FAM43AQ8N2R8 423 aa19.96■□□□□ 0.79
ITGA3-204ENST00000505306 ZSCAN29Q8IWY8 852 aaPredicted RBP19.96■□□□□ 0.79
ITGA3-204ENST00000505306 SMC3Q9UQE7 1217 aa19.96■□□□□ 0.79
ITGA3-204ENST00000505306 XBP1P17861 261 aa19.95■□□□□ 0.78
ITGA3-204ENST00000505306 FAM13BQ9NYF5 915 aa19.95■□□□□ 0.78
ITGA3-204ENST00000505306 NOS1P29475 1434 aa19.95■□□□□ 0.78
ITGA3-204ENST00000505306 BCL11BQ9C0K0 894 aaPredicted RBP19.95■□□□□ 0.78
ITGA3-204ENST00000505306 CEP126Q9P2H0 1117 aa19.95■□□□□ 0.78
ITGA3-204ENST00000505306 MIS18AQ9NYP9 233 aa19.95■□□□□ 0.78
ITGA3-204ENST00000505306 CHRNA2Q15822 529 aa19.95■□□□□ 0.78
ITGA3-204ENST00000505306 BECN2A8MW95 431 aa19.94■□□□□ 0.78
ITGA3-204ENST00000505306 CDC45O75419 566 aa19.94■□□□□ 0.78
ITGA3-204ENST00000505306 MCM10Q7L590 875 aa19.94■□□□□ 0.78
ITGA3-204ENST00000505306 WDR63Q8IWG1 891 aa19.93■□□□□ 0.78
ITGA3-204ENST00000505306 KDM4AO75164 1064 aa19.93■□□□□ 0.78
ITGA3-204ENST00000505306 PSMA5P28066 241 aa19.93■□□□□ 0.78
ITGA3-204ENST00000505306 HIP1O00291 1037 aa19.93■□□□□ 0.78
ITGA3-204ENST00000505306 NACAP1Q9BZK3 213 aa19.92■□□□□ 0.78
ITGA3-204ENST00000505306 EMILIN1Q9Y6C2 1016 aa19.92■□□□□ 0.78
ITGA3-204ENST00000505306 GOLGA6L19H0YKK7 550 aa19.92■□□□□ 0.78
ITGA3-204ENST00000505306 NCOA1Q15788 1441 aa19.92■□□□□ 0.78
ITGA3-204ENST00000505306 BICD2Q8TD16 824 aa19.92■□□□□ 0.78
ITGA3-204ENST00000505306 PTPN23Q9H3S7 1636 aa19.91■□□□□ 0.78
ITGA3-204ENST00000505306 BACH2Q9BYV9 841 aa19.91■□□□□ 0.78
ITGA3-204ENST00000505306 FKBP4Q02790 459 aaKnown RBP eCLIP19.91■□□□□ 0.78
ITGA3-204ENST00000505306 C8orf37Q96NL8 207 aa19.91■□□□□ 0.78
ITGA3-204ENST00000505306 STK11IPQ8N1F8 1099 aa19.9■□□□□ 0.78
ITGA3-204ENST00000505306 PCMTD1Q96MG8 357 aaPredicted RBP19.9■□□□□ 0.78
ITGA3-204ENST00000505306 TMOD2Q9NZR1 351 aa19.9■□□□□ 0.78
ITGA3-204ENST00000505306 PEG3Q9GZU2 1588 aa19.9■□□□□ 0.78
ITGA3-204ENST00000505306 R3HCC1Q9Y3T6 440 aaKnown RBP19.9■□□□□ 0.78
ITGA3-204ENST00000505306 SRGAP3O43295 1099 aa19.9■□□□□ 0.78
ITGA3-204ENST00000505306 PKNOX2Q96KN3 472 aa19.9■□□□□ 0.78
ITGA3-204ENST00000505306 AK7Q96M32 723 aa19.9■□□□□ 0.78
ITGA3-204ENST00000505306 HOOK1Q9UJC3 728 aaKnown RBP19.9■□□□□ 0.78
ITGA3-204ENST00000505306 PLCH2O75038 1416 aa19.9■□□□□ 0.78
ITGA3-204ENST00000505306 UHRF1BP1LA0JNW5 1464 aa19.9■□□□□ 0.78
ITGA3-204ENST00000505306 RAI14Q9P0K7 980 aa19.9■□□□□ 0.78
ITGA3-204ENST00000505306 NPHP3Q7Z494 1330 aa19.9■□□□□ 0.78
ITGA3-204ENST00000505306 TPM1P09493 284 aa19.89■□□□□ 0.77
ITGA3-204ENST00000505306 KDM5BQ9UGL1 1544 aa19.89■□□□□ 0.77
ITGA3-204ENST00000505306 TMPOP42166 694 aaKnown RBP19.89■□□□□ 0.77
ITGA3-204ENST00000505306 MRE11P49959 708 aa19.89■□□□□ 0.77
ITGA3-204ENST00000505306 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.89■□□□□ 0.77
ITGA3-204ENST00000505306 THUMPD2Q9BTF0 503 aaKnown RBP19.89■□□□□ 0.77
ITGA3-204ENST00000505306 C14orf93Q9H972 538 aaKnown RBP19.89■□□□□ 0.77
ITGA3-204ENST00000505306 TAF7Q15545 349 aaPredicted RBP19.88■□□□□ 0.77
ITGA3-204ENST00000505306 ACEP12821 1306 aa19.88■□□□□ 0.77
ITGA3-204ENST00000505306 DCTN1Q14203 1278 aa19.88■□□□□ 0.77
ITGA3-204ENST00000505306 WDR7Q9Y4E6 1490 aa19.88■□□□□ 0.77
ITGA3-204ENST00000505306 CT47B1P0C2W7 299 aaPredicted RBP19.88■□□□□ 0.77
ITGA3-204ENST00000505306 DUSP27Q5VZP5 1158 aa19.87■□□□□ 0.77
ITGA3-204ENST00000505306 ANKRD20A12PQ8NF67 263 aa19.87■□□□□ 0.77
ITGA3-204ENST00000505306 LRRCC1Q9C099 1032 aa19.87■□□□□ 0.77
ITGA3-204ENST00000505306 ZSCAN25Q6NSZ9 544 aa19.87■□□□□ 0.77
ITGA3-204ENST00000505306 ZNF219Q9P2Y4 722 aaPredicted RBP19.87■□□□□ 0.77
ITGA3-204ENST00000505306 SPINK5Q9NQ38 1064 aaPredicted RBP19.87■□□□□ 0.77
ITGA3-204ENST00000505306 ATP10BO94823 1461 aa19.87■□□□□ 0.77
ITGA3-204ENST00000505306 LRP2BPQ9P2M1 347 aa19.86■□□□□ 0.77
ITGA3-204ENST00000505306 BCAR3O75815 825 aa19.86■□□□□ 0.77
ITGA3-204ENST00000505306 GOLGA6L1Q8N7Z2 621 aa19.86■□□□□ 0.77
ITGA3-204ENST00000505306 AACSQ86V21 672 aa19.86■□□□□ 0.77
ITGA3-204ENST00000505306 ATF7IPQ6VMQ6 1270 aa19.86■□□□□ 0.77
ITGA3-204ENST00000505306 GCC1Q96CN9 775 aa19.86■□□□□ 0.77
ITGA3-204ENST00000505306 IFNL2Q8IZJ0 200 aa19.85■□□□□ 0.77
ITGA3-204ENST00000505306 ANKRD24Q8TF21 1146 aa19.85■□□□□ 0.77
ITGA3-204ENST00000505306 ANKIB1Q9P2G1 1089 aa19.85■□□□□ 0.77
ITGA3-204ENST00000505306 METTL24Q5JXM2 366 aa19.85■□□□□ 0.77
ITGA3-204ENST00000505306 LARP1Q6PKG0 1096 aaKnown RBP19.85■□□□□ 0.77
ITGA3-204ENST00000505306 RPGRQ92834 1020 aaKnown RBP19.85■□□□□ 0.77
ITGA3-204ENST00000505306 NCKAP5LQ9HCH0 1330 aa19.85■□□□□ 0.77
ITGA3-204ENST00000505306 A2MP01023 1474 aa19.84■□□□□ 0.77
ITGA3-204ENST00000505306 ATP2B1P20020 1258 aa19.84■□□□□ 0.77
ITGA3-204ENST00000505306 ABCF2Q9UG63 623 aa19.84■□□□□ 0.77
ITGA3-204ENST00000505306 FMNL2Q96PY5 1086 aa19.84■□□□□ 0.77
ITGA3-204ENST00000505306 TRMT112Q9UI30 125 aaKnown RBP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms